Clone Name | bastl28d05 |
---|---|
Clone Library Name | barley_pub |
>IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34| (eIF-(iso)4F p82-34) Length = 788 Score = 34.3 bits (77), Expect = 0.087 Identities = 19/32 (59%), Positives = 19/32 (59%) Frame = +1 Query: 157 MTTDQPVISLXXXXXXXXXXXXXLFAPAFAVA 252 MTTDQPVISL LFAPAFAVA Sbjct: 1 MTTDQPVISLRPGGGGGGPRGGRLFAPAFAVA 32
>PDE2A_HUMAN (O00408) cGMP-dependent 3',5'-cyclic phosphodiesterase (EC| 3.1.4.17) (Cyclic GMP-stimulated phosphodiesterase) (CGS-PDE) (cGSPDE) Length = 941 Score = 29.6 bits (65), Expect = 2.1 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +3 Query: 12 RSQTEPNPPPREEGKKKLGFLRDFLPGAPPIPCRSSCRGALVGFGTL 152 RSQ P P E +++ FL+ P PP PC S + AL+ G++ Sbjct: 12 RSQQYPAARPAEPRGQQV-FLKPDEPPPPPQPCADSLQDALLSLGSV 57
>STK6_XENLA (Q91820) Serine/threonine-protein kinase Eg2 (EC 2.7.11.1) (pEg2)| (p46Eg265) Length = 407 Score = 28.5 bits (62), Expect = 4.8 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +3 Query: 6 GERSQTEPNPPPREEGKKKLGFLRDFLPGAP 98 G Q + + P+EEGKKK L DF G P Sbjct: 115 GSTDQGKTSAVPKEEGKKKQWCLEDFEIGRP 145
>GMIP_MOUSE (Q6PGG2) GEM-interacting protein (GMIP)| Length = 971 Score = 27.7 bits (60), Expect = 8.1 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 39 PREEGKKKLGFLRDFLPGAPPIPCRSSC 122 P E G++ F+R PGAPP P + C Sbjct: 342 PFEPGQRYQEFVRTLQPGAPPPPSPAFC 369
>PAK1_MOUSE (O88643) Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1)| (p21-activated kinase 1) (PAK-1) (P65-PAK) (Alpha-PAK) (CDC42/RAC effector kinase PAK-A) Length = 545 Score = 27.7 bits (60), Expect = 8.1 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +3 Query: 21 TEPNPPPREEGKKKLGFLRDFLPG 92 ++P PP EE KKK F R LPG Sbjct: 38 SKPLPPNPEEKKKKDRFYRSILPG 61
>PAK1_HUMAN (Q13153) Serine/threonine-protein kinase PAK 1 (EC 2.7.11.1)| (p21-activated kinase 1) (PAK-1) (P65-PAK) (Alpha-PAK) Length = 545 Score = 27.7 bits (60), Expect = 8.1 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +3 Query: 21 TEPNPPPREEGKKKLGFLRDFLPG 92 ++P PP EE KKK F R LPG Sbjct: 38 SKPLPPNPEEKKKKDRFYRSILPG 61 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,401,342 Number of Sequences: 219361 Number of extensions: 411892 Number of successful extensions: 1311 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1238 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1308 length of database: 80,573,946 effective HSP length: 60 effective length of database: 67,412,286 effective search space used: 1617894864 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)