Clone Name | bastl28d02 |
---|---|
Clone Library Name | barley_pub |
>PAG2_PIG (Q29079) Pregnancy-associated glycoprotein 2 precursor (EC| 3.4.23.-) (PAG 2) Length = 420 Score = 33.1 bits (74), Expect = 0.40 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -1 Query: 484 MSRIHQLLSHIIKESIVPCNGGRATP 407 +++IH L+ H KE +VPCN +A P Sbjct: 290 VAKIHSLIKHFEKEYVVPCNARKALP 315
>SYD_SYNS9 (Q3AVS9) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 610 Score = 30.0 bits (66), Expect = 3.3 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -2 Query: 402 VSPTKIAVGDWVALPETHQLGLSNLLPVGIPR 307 V P+++ GDW ALP++ QL L+ GI R Sbjct: 183 VLPSRVCGGDWFALPQSPQLFKQLLMVGGIER 214
>SYD_PROMA (Q7V9I1) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 605 Score = 29.6 bits (65), Expect = 4.4 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -2 Query: 396 PTKIAVGDWVALPETHQLGLSNLLPVGIPR 307 P+++ GDW ALP++ QL L+ GI R Sbjct: 185 PSRVCEGDWFALPQSPQLFKQLLMVGGIER 214
>MACF1_MOUSE (Q9QXZ0) Microtubule-actin crosslinking factor 1 (Actin cross-linking| family 7) Length = 5327 Score = 28.5 bits (62), Expect = 9.7 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = +2 Query: 320 TGSRLERPS**VSGRATQSPTAILVGDTPRSRSPAVTG 433 +GS+L+RP+ A S L GDT S SPA TG Sbjct: 5204 SGSKLKRPT-----PAFHSSRTSLAGDTSNSSSPASTG 5236
>SYD_SYNPX (Q7U3K6) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 610 Score = 28.5 bits (62), Expect = 9.7 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -2 Query: 402 VSPTKIAVGDWVALPETHQLGLSNLLPVGIPR 307 V P+++ G+W ALP++ QL L+ GI R Sbjct: 183 VLPSRVCGGEWFALPQSPQLFKQLLMVGGIER 214
>SYD_GLOVI (Q7NJA4) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 595 Score = 28.5 bits (62), Expect = 9.7 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -2 Query: 396 PTKIAVGDWVALPETHQLGLSNLLPVGIPR 307 P+++ GDW ALP++ QL L+ G R Sbjct: 182 PSRVNPGDWFALPQSPQLFKQLLMVAGFDR 211 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,180,796 Number of Sequences: 219361 Number of extensions: 878791 Number of successful extensions: 2730 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2668 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2729 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)