>NIPA_PONPY (Q5R8V9) Nuclear-interacting partner of ALK (Nuclear-interacting|
           partner of anaplastic lymphoma kinase) (Zinc finger
           C3HC-type protein 1)
          Length = 502

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = -2

Query: 378 NVPSGKE*NLTEWSTEPDASEPPEPGARA 292
           NV  GKE +     TEPDAS P EPG +A
Sbjct: 433 NVTLGKE-SRENGGTEPDASAPAEPGWKA 460

>NIPA_HUMAN (Q86WB0) Nuclear-interacting partner of ALK (Nuclear-interacting|
           partner of anaplastic lymphoma kinase) (hNIPA) (Zinc
           finger C3HC-type protein 1)
          Length = 502

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -2

Query: 378 NVPSGKE*NLTEWSTEPDASEPPEPGARA 292
           N+  GKE +     TEPDAS P EPG +A
Sbjct: 433 NITLGKE-SRENGGTEPDASAPAEPGWKA 460

>SOX13_MOUSE (Q04891) SOX-13 protein|
          Length = 985

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 189 ATSAADAVTTCCPPGDQATEQKAGEPEP 106
           A ++ DA T   PP D A+ + +G PEP
Sbjct: 34  APASQDAATAKAPPQDCASPESSGSPEP 61

>AAAS_MOUSE (P58742) Aladin (Adracalin)|
          Length = 546

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 113 GSPAFCSVAWSPGGQHVVTASAADVAILIHD 205
           G     S+AW+P G  +++AS  D  IL+ D
Sbjct: 243 GHTPVTSLAWAPNGGWLLSASPVDAVILVWD 273

>AAAS_HUMAN (Q9NRG9) Aladin (Adracalin)|
          Length = 546

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 113 GSPAFCSVAWSPGGQHVVTASAADVAILIHD 205
           G     S+AW+P G  +++AS  D AI + D
Sbjct: 243 GHTPVTSLAWAPSGGRLLSASPVDAAIRVWD 273


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,659,246
Number of Sequences: 219361
Number of extensions: 564944
Number of successful extensions: 2414
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2414
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)