>DNE21_RHIME (Q92LA6) Error-prone DNA polymerase 1 (EC 2.7.7.7)|
          Length = 1116

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
 Frame = -3

Query: 403 HPYVRKVYGALCFCVTAG----RRGDLVDVELDAVAGEDEHLAV--EGHGHPVPEQLRVL 242
           +P  R+ +G LC  ++AG    ++GD      D +  ++E L +  +G G P PE L VL
Sbjct: 83  YPKNRRGWGHLCRLLSAGNLRSKKGDCTLHLADLLEWQEELLLIVMQGEGRPEPESLEVL 142

>GATA_CHLTE (Q8KFQ4) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)|
           (Glu-ADT subunit A)
          Length = 481

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
 Frame = -3

Query: 382 YGALCFCVTAGRRG------DLVDVELDAVAGEDEHLAVEGHGHPVPEQLRVLRHLS--G 227
           YG + F  +  + G      D   + L  +AG+DEH A   H H VPE    + H+S  G
Sbjct: 198 YGLVAFASSFDQIGLLAANCDDAALVLGVIAGKDEHDATSSH-HDVPEYDTAMDHVSVDG 256

Query: 226 LRI 218
           LRI
Sbjct: 257 LRI 259

>TUS_KLEPO (O52715) DNA replication terminus site-binding protein (Ter-binding|
           protein)
          Length = 310

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = -3

Query: 379 GALCFCVTAGRRGDLVD--VELDAVAGEDEHLAVEGHGHPVPEQLR-VLRHLSGLRILSA 209
           GA+C  VTA  + DL+     ++A+    E +     G P   +   V RHL GL  LSA
Sbjct: 96  GAICLQVTAAEQQDLLARIQHINALKATFEKIVTVDSGLPPTARFEWVHRHLPGLITLSA 155

Query: 208 RLLLEP 191
              L P
Sbjct: 156 YRTLTP 161

>CSN12_ASPFU (Q4WJX0) COP9 signalosome complex subunit 12|
          Length = 455

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 400 PYVRKVYGALCFCVTAGRRGDLVDVELDAVAGEDE 296
           P + K++  LC C+   R+GDLV  +    AGE+E
Sbjct: 314 PRLEKLFRPLCDCI---RKGDLVGFDTAMFAGEEE 345

>ANNU_SCHAM (P52183) Annulin (Protein-glutamine gamma-glutamyltransferase) (EC|
           2.3.2.13) (Transglutaminase)
          Length = 772

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 8   TKQPDRFEKPSLASLPRHPDPGLLPGIG 91
           T++PD   KP  A +P  P PG +P  G
Sbjct: 32  TRRPDSLPKPPAAVVPSPPSPGDVPDAG 59

>TMPS4_MOUSE (Q8VCA5) Transmembrane protease, serine 4 (EC 3.4.21.-)|
           (Channel-activating protease 2) (mCAP2)
          Length = 435

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -3

Query: 349 RRGDLVDVELDAVAGEDEHLAVEGHGHPVPEQLRVLRHLSGLRILSA 209
           +RG L D  LD  +GEDE   V+         +R+ +  S L++L A
Sbjct: 70  QRGQLCDGHLDCASGEDEEHCVKDFPEKPGVAVRLSKDRSTLQVLDA 116

>MATN3_MOUSE (O35701) Matrilin-3 precursor|
          Length = 481

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 16/27 (59%), Positives = 17/27 (62%)
 Frame = -3

Query: 244 LRHLSGLRILSARLLLEPSFLAPPRRA 164
           LRHL GL +L   LLL PS  AP R A
Sbjct: 7   LRHLPGLLLLLWPLLLLPSLAAPGRLA 33

>IER5_HUMAN (Q5VY09) Immediate early response gene 5 protein|
          Length = 327

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = -1

Query: 141 SDEWVGAGLAGVAGTRFPIPGRRPGSGCLGSEARLG 34
           SD   G  LAG AGT  P P ++PG    G  A  G
Sbjct: 49  SDPCPGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWG 84

>ATL2G_ARATH (O64763) RING-H2 finger protein ATL2G precursor (RING-H2 finger|
           protein ATL9)
          Length = 378

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
 Frame = -1

Query: 330 TW---NSTPSRARTNISPWKGTGIPFPNS 253
           TW   N TP    T +S W+ TGI FP S
Sbjct: 227 TWSNSNITPRSKSTGLSSWQITGILFPRS 255

>LEU3_LACLA (Q02143) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM|
           dehydrogenase) (IMDH) (3-IPM-DH)
          Length = 345

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -3

Query: 334 VDVELDAVAGEDEHLAVEGHGHPVPEQ 254
           +D E +  A +   +A++ HGHP+PE+
Sbjct: 32  IDFEYELEAKDFGGIAIDKHGHPLPEE 58


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,070,854
Number of Sequences: 219361
Number of extensions: 925708
Number of successful extensions: 3149
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3149
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)