>gb|AC158603.6| Mus musculus 10 BAC RP24-466C12 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 149929

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 198    tgctcaggttctgtggctttctat 221
              ||||||||||||||||||||||||
Sbjct: 122874 tgctcaggttctgtggctttctat 122851

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 128     cacctcccccgcgggctccggtc 150
               |||||||||||||||||||||||
Sbjct: 4457096 cacctcccccgcgggctccggtc 4457118

>gb|AF087683.1|AF087683 Phialophora sp. Zriba 1998 isolate 357-2 internal transcribed
           spacer 1, 5.8S ribosomal RNA gene, and internal
           transcribed spacer 2, complete sequence
          Length = 527

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 330 cggagtcaccaaaattcttgat 351
           ||||||||||||||||||||||
Sbjct: 120 cggagtcaccaaaattcttgat 141

>gb|AC161342.10| Mus musculus chromosome 1, clone RP23-313K17, complete sequence
          Length = 181572

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 204    ggttctgtggctttctatgtg 224
              |||||||||||||||||||||
Sbjct: 116433 ggttctgtggctttctatgtg 116453

>dbj|AK040186.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A430075G10 product:nuclear antigen Sp100,
            full insert sequence
          Length = 3808

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 204  ggttctgtggctttctatgtg 224
            |||||||||||||||||||||
Sbjct: 2819 ggttctgtggctttctatgtg 2799

>gb|AC147513.16| Mus musculus chromosome 1, clone RP23-105K16, complete sequence
          Length = 209834

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 204    ggttctgtggctttctatgtg 224
              |||||||||||||||||||||
Sbjct: 156237 ggttctgtggctttctatgtg 156257

>ref|XM_580742.2| PREDICTED: Bos taurus similar to DENN/MADD domain containing 2D
           (LOC504595), mRNA
          Length = 2645

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 15  aaaagaaagcactcagggga 34
           ||||||||||||||||||||
Sbjct: 745 aaaagaaagcactcagggga 764

>emb|AL589165.10| Human DNA sequence from clone RP11-117P22 on chromosome 10 Contains
            the 3' end of a novel gene and a novel gene, complete
            sequence
          Length = 112670

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  aggttctgtggctttctatg 222
            ||||||||||||||||||||
Sbjct: 5216 aggttctgtggctttctatg 5197

>gb|AC069528.10| Homo sapiens 3 BAC RP11-329N15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163163

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 264    aaaaacccatgaagaaaatc 283
              ||||||||||||||||||||
Sbjct: 110613 aaaaacccatgaagaaaatc 110632

>emb|BX538351.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 2/4
          Length = 307050

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 447    gccatggcggccgataacaa 466
              ||||||||||||||||||||
Sbjct: 149185 gccatggcggccgataacaa 149166

>gb|AF525477.1| Thermus igniterrae superoxide dismutase gene, partial cds
          Length = 538

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 119 ggccttcttcacctcccccgcgggctcc 146
           ||||||||||| ||||||| ||||||||
Sbjct: 285 ggccttcttcagctcccccacgggctcc 258

>gb|AC108695.2| Homo sapiens 3 BAC RP11-744C8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 190845

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    aaaaacccatgaagaaaatc 283
              ||||||||||||||||||||
Sbjct: 169534 aaaaacccatgaagaaaatc 169515

>gb|AC068442.7| Homo sapiens chromosome 17, clone RP11-187D20, complete sequence
          Length = 59731

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   tagctctcttgtctcttgcc 449
             ||||||||||||||||||||
Sbjct: 35470 tagctctcttgtctcttgcc 35451

>emb|BX548002.12| Zebrafish DNA sequence from clone CH211-170I2 in linkage group 25,
             complete sequence
          Length = 149569

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   gcaaaatccaaaatggcgtc 391
             ||||||||||||||||||||
Sbjct: 52460 gcaaaatccaaaatggcgtc 52479

>gb|AC026799.4| Homo sapiens chromosome 5 clone CTD-2366H10, complete sequence
          Length = 162918

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   ctgctctgctcaggttctgt 211
             ||||||||||||||||||||
Sbjct: 43577 ctgctctgctcaggttctgt 43558

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 247      tctgaaatccgtgccccaaa 266
                ||||||||||||||||||||
Sbjct: 18424456 tctgaaatccgtgccccaaa 18424475

>gb|AC096583.1| Homo sapiens BAC clone RP11-639A20 from 2, complete sequence
          Length = 52168

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  aaaacccatgaagaaaatca 284
            ||||||||||||||||||||
Sbjct: 9228 aaaacccatgaagaaaatca 9209

>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 119    ggccttcttcacctcccccgcgggctcc 146
              ||||||||||| ||||||| ||||||||
Sbjct: 518632 ggccttcttcagctcccccacgggctcc 518659

>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_B11
          Length = 102824

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   tctgaaatccgtgccccaaa 266
             ||||||||||||||||||||
Sbjct: 16304 tctgaaatccgtgccccaaa 16323

>emb|AL845160.8| Mouse DNA sequence from clone RP23-303O15 on chromosome 2, complete
              sequence
          Length = 170074

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    tctgtggctttctatgtgtg 226
              ||||||||||||||||||||
Sbjct: 143959 tctgtggctttctatgtgtg 143940

>dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2
          Length = 84896

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   ccaaaaacccatgaagaaaa 281
             ||||||||||||||||||||
Sbjct: 57898 ccaaaaacccatgaagaaaa 57917

>gb|AC005358.1|AC005358 Homo sapiens chromosome 17, clone hRPK.746_E_8, complete sequence
          Length = 184886

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 430  tagctctcttgtctcttgcc 449
            ||||||||||||||||||||
Sbjct: 8876 tagctctcttgtctcttgcc 8857

>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 119    ggccttcttcacctcccccgcgggctcc 146
              ||||||||||| ||||||| ||||||||
Sbjct: 169128 ggccttcttcagctcccccacgggctcc 169155

>gb|AC158166.2| Mus musculus BAC clone RP23-339K21 from chromosome 16, complete sequence
          Length = 194274

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    tgctctgctcaggttctgtg 212
              ||||||||||||||||||||
Sbjct: 193015 tgctctgctcaggttctgtg 193034

>gb|AC164566.3| Mus musculus BAC clone RP23-94P17 from chromosome 16, complete sequence
          Length = 203314

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   tgctctgctcaggttctgtg 212
             ||||||||||||||||||||
Sbjct: 65589 tgctctgctcaggttctgtg 65570

>dbj|D84646.1|TTHILVB Thermus aquaticus DNA for acetolactate synthase (ilvB), fumarase,
            manganese superoxide dismutase, partial cds and complete
            cds
          Length = 6955

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 119  ggccttcttcacctcccccgcgggctcc 146
            ||||||||||| ||||||| ||||||||
Sbjct: 4846 ggccttcttcagctcccccacgggctcc 4819

>dbj|D13387.1|TTHSUPDIS Thermus aquaticus gene for superoxide dismutase, complete cds
          Length = 915

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 119 ggccttcttcacctcccccgcgggctcc 146
           ||||||||||| ||||||| ||||||||
Sbjct: 404 ggccttcttcagctcccccacgggctcc 377

>dbj|AB010884.1| Thermus thermophilus fumC and sodA genes for class II fumarase and
            manganese superoxide dismutase, complete cds
          Length = 2831

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 119  ggccttcttcacctcccccgcgggctcc 146
            ||||||||||| ||||||| ||||||||
Sbjct: 1881 ggccttcttcagctcccccacgggctcc 1854


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,133,110
Number of Sequences: 3902068
Number of extensions: 4133110
Number of successful extensions: 85646
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85531
Number of HSP's gapped (non-prelim): 115
length of query: 498
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 476
effective length of database: 17,147,199,772
effective search space: 8162067091472
effective search space used: 8162067091472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)