>ref|XM_483801.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3145

 Score =  127 bits (64), Expect = 4e-26
 Identities = 160/192 (83%)
 Strand = Plus / Plus

                                                                       
Query: 264 cagcaagaggacagcttgtttgactgcaacagagccacctcctgctgcagccgaagaacc 323
           ||||||||||||| ||||||    |||||| ||||| || ||| |  || ||||||||||
Sbjct: 218 cagcaagaggacaacttgttccgttgcaaccgagccgccgccttccacaaccgaagaacc 277

                                                                       
Query: 324 agagatggaccttccgaaggagatattcttgaaagactacaaaaaacccgactacttgtt 383
           ||||||||| ||||| |||||||||||| ||||||| |||||||| || || ||||| ||
Sbjct: 278 agagatggatcttccaaaggagatattcctgaaagaatacaaaaagcctgattacttatt 337

                                                                       
Query: 384 tgacacggtggatttagaatttcaacttggtgatgaaaagaccatagtcacttctaacat 443
           |||| ||||  |||| |||||||||||||| || || || || ||||| || ||||| ||
Sbjct: 338 tgactcggtcaatttggaatttcaacttggcgaagacaaaacaatagttacatctaaaat 397

                       
Query: 444 agctgtatctcc 455
           ||||||||||||
Sbjct: 398 agctgtatctcc 409

>dbj|AK064900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L14, full
           insert sequence
          Length = 3181

 Score =  127 bits (64), Expect = 4e-26
 Identities = 160/192 (83%)
 Strand = Plus / Plus

                                                                       
Query: 264 cagcaagaggacagcttgtttgactgcaacagagccacctcctgctgcagccgaagaacc 323
           ||||||||||||| ||||||    |||||| ||||| || ||| |  || ||||||||||
Sbjct: 218 cagcaagaggacaacttgttccgttgcaaccgagccgccgccttccacaaccgaagaacc 277

                                                                       
Query: 324 agagatggaccttccgaaggagatattcttgaaagactacaaaaaacccgactacttgtt 383
           ||||||||| ||||| |||||||||||| ||||||| |||||||| || || ||||| ||
Sbjct: 278 agagatggatcttccaaaggagatattcctgaaagaatacaaaaagcctgattacttatt 337

                                                                       
Query: 384 tgacacggtggatttagaatttcaacttggtgatgaaaagaccatagtcacttctaacat 443
           |||| ||||  |||| |||||||||||||| || || || || ||||| || ||||| ||
Sbjct: 338 tgactcggtcaatttggaatttcaacttggcgaagacaaaacaatagttacatctaaaat 397

                       
Query: 444 agctgtatctcc 455
           ||||||||||||
Sbjct: 398 agctgtatctcc 409

>gb|AY105426.1| Zea mays PCO146438 mRNA sequence
          Length = 3165

 Score =  127 bits (64), Expect = 4e-26
 Identities = 142/168 (84%)
 Strand = Plus / Plus

                                                                       
Query: 288 tgcaacagagccacctcctgctgcagccgaagaaccagagatggaccttccgaaggagat 347
           |||||||||||| || ||||||||  | ||||||||||  |||||  | || ||||||||
Sbjct: 315 tgcaacagagccgccgcctgctgccactgaagaaccaggcatggatgtccccaaggagat 374

                                                                       
Query: 348 attcttgaaagactacaaaaaacccgactacttgtttgacacggtggatttagaatttca 407
           |||||||||||| |||||   ||| || || |  |||||||||||||||||| |||||||
Sbjct: 375 attcttgaaagattacaaggcacctgattattattttgacacggtggatttacaatttca 434

                                                           
Query: 408 acttggtgatgaaaagaccatagtcacttctaacatagctgtatctcc 455
           ||||||||| |||||||||||||| || ||||| |||| |||||||||
Sbjct: 435 acttggtgaagaaaagaccatagttacatctaaaatagttgtatctcc 482

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 108/129 (83%)
 Strand = Plus / Minus

                                                                            
Query: 264      cagcaagaggacagcttgtttgactgcaacagagccacctcctgctgcagccgaagaacc 323
                ||||||||||||| ||||||    |||||| ||||| || ||| |  || ||||||||||
Sbjct: 28173413 cagcaagaggacaacttgttccgttgcaaccgagccgccgccttccacaaccgaagaacc 28173354

                                                                            
Query: 324      agagatggaccttccgaaggagatattcttgaaagactacaaaaaacccgactacttgtt 383
                ||||||||| ||||| |||||||||||| ||||||| |||||||| || || ||||| ||
Sbjct: 28173353 agagatggatcttccaaaggagatattcctgaaagaatacaaaaagcctgattacttatt 28173294

                         
Query: 384      tgacacggt 392
                |||| ||||
Sbjct: 28173293 tgactcggt 28173285



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                            
Query: 395      atttagaatttcaacttggtgatgaaaagaccatagtcacttctaacatagctgtatctc 454
                |||| |||||||||||||| || || || || ||||| || ||||| |||||||||||||
Sbjct: 28173045 atttggaatttcaacttggcgaagacaaaacaatagttacatctaaaatagctgtatctc 28172986

                 
Query: 455      c 455
                |
Sbjct: 28172985 c 28172985

>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0543D10
          Length = 134866

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 108/129 (83%)
 Strand = Plus / Minus

                                                                         
Query: 264   cagcaagaggacagcttgtttgactgcaacagagccacctcctgctgcagccgaagaacc 323
             ||||||||||||| ||||||    |||||| ||||| || ||| |  || ||||||||||
Sbjct: 56886 cagcaagaggacaacttgttccgttgcaaccgagccgccgccttccacaaccgaagaacc 56827

                                                                         
Query: 324   agagatggaccttccgaaggagatattcttgaaagactacaaaaaacccgactacttgtt 383
             ||||||||| ||||| |||||||||||| ||||||| |||||||| || || ||||| ||
Sbjct: 56826 agagatggatcttccaaaggagatattcctgaaagaatacaaaaagcctgattacttatt 56767

                      
Query: 384   tgacacggt 392
             |||| ||||
Sbjct: 56766 tgactcggt 56758



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                         
Query: 395   atttagaatttcaacttggtgatgaaaagaccatagtcacttctaacatagctgtatctc 454
             |||| |||||||||||||| || || || || ||||| || ||||| |||||||||||||
Sbjct: 56518 atttggaatttcaacttggcgaagacaaaacaatagttacatctaaaatagctgtatctc 56459

              
Query: 455   c 455
             |
Sbjct: 56458 c 56458

>emb|CR936839.12| Mouse DNA sequence from clone CH29-120A16 on chromosome 1, complete
              sequence
          Length = 250586

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 395    atttagaatttcaacttggtga 416
              ||||||||||||||||||||||
Sbjct: 178373 atttagaatttcaacttggtga 178352

>emb|AL663047.15| Mouse DNA sequence from clone RP23-146J17 on chromosome 1 Contains the
             gene for a dynein cytoplasmic light polypeptide 1 (DNCL1)
             pseudogene, the gene for a ribosomal protein L18 (RPL18)
             pseudogene and the Ctla4 gene for cytotoxic
             T-lymphocyte-associated protein 4, complete sequence
          Length = 77653

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 395   atttagaatttcaacttggtga 416
             ||||||||||||||||||||||
Sbjct: 52215 atttagaatttcaacttggtga 52236

>gb|AF175313.1|AF175313 Oncorhynchus mykiss cardiac sodium-calcium exchanger (NCX) mRNA,
            complete cds
          Length = 3302

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 89   gcggcgttcctcctcctccttc 110
            ||||||||||||||||||||||
Sbjct: 2150 gcggcgttcctcctcctccttc 2129

>emb|AL596283.10| Mouse DNA sequence from clone DN-257N2 on chromosome 1, complete
             sequence
          Length = 162143

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 395   atttagaatttcaacttggtga 416
             ||||||||||||||||||||||
Sbjct: 89615 atttagaatttcaacttggtga 89636

>ref|XM_956923.1| Neurospora crassa OR74A hypothetical protein (NCU08667.1) partial
           mRNA
          Length = 1236

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 95  ttcctcctcctccttcgacca 115
           |||||||||||||||||||||
Sbjct: 743 ttcctcctcctccttcgacca 763

>ref|XM_329790.1| Neurospora crassa OR74A hypothetical protein (NCU08667.1) partial
           mRNA
          Length = 1236

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 95  ttcctcctcctccttcgacca 115
           |||||||||||||||||||||
Sbjct: 743 ttcctcctcctccttcgacca 763

>emb|Z46791.1|CEC09G5 Caenorhabditis elegans Cosmid C09G5, complete sequence
          Length = 29688

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    ttcctcctcctccttcgacca 115
             |||||||||||||||||||||
Sbjct: 14253 ttcctcctcctccttcgacca 14233

>gb|AE010301.1| Leptospira interrogans serovar Lai str. 56601 chromosome II, complete
              sequence
          Length = 358943

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 114    caagtatcaaagattgccttt 134
              |||||||||||||||||||||
Sbjct: 203010 caagtatcaaagattgccttt 202990

>gb|AF053485.1|AF053485 Felis catus acetylcholinesterase glycophospholipid-anchored form
            precursor (ACHE) and acetylcholinesterase collagen-tailed
            or globular form precursor (ACHE) genes, complete cds
          Length = 3958

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 454  cccaggcatgaaggcacctca 474
            |||||||||||||||||||||
Sbjct: 1222 cccaggcatgaaggcacctca 1242

>gb|AE005066.1| Halobacterium sp. NRC-1 section 97 of 170 of the complete genome
          Length = 11460

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 82   cggcggcgcggcgttcctcct 102
            |||||||||||||||||||||
Sbjct: 3254 cggcggcgcggcgttcctcct 3274

>gb|AE016824.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130,
              chromosome II, complete sequence
          Length = 350181

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 114    caagtatcaaagattgccttt 134
              |||||||||||||||||||||
Sbjct: 201198 caagtatcaaagattgccttt 201178

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 80      cccggcggcgcggcgttcct 99
               ||||||||||||||||||||
Sbjct: 2013974 cccggcggcgcggcgttcct 2013993

>gb|AC005215.2| Homo sapiens chromosome 5, BAC clone 89K19 (LBNL H179), complete
             sequence
          Length = 110312

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 204   ttcacactggacaggaacaaggtc 227
             |||||| |||||||||||||||||
Sbjct: 33004 ttcacagtggacaggaacaaggtc 33027

>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0024M06, complete sequence
          Length = 51144

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   acacggtggatttagaattt 405
             ||||||||||||||||||||
Sbjct: 22597 acacggtggatttagaattt 22578

>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24,
              complete sequence
          Length = 137721

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 386    acacggtggatttagaattt 405
              ||||||||||||||||||||
Sbjct: 123285 acacggtggatttagaattt 123266

>gb|AC084391.1| Mus musculus BAC clone RP23-294I17 from 1, complete sequence
          Length = 166182

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 151   ggttccccagggaacaaggactct 174
             |||||||||||| |||||||||||
Sbjct: 49940 ggttccccagggcacaaggactct 49917

>gb|AC183921.2| Pan troglodytes BAC clone CH251-617M1 from chromosome unknown, complete
             sequence
          Length = 188195

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 204   ttcacactggacaggaacaaggtc 227
             |||||| |||||||||||||||||
Sbjct: 44519 ttcacagtggacaggaacaaggtc 44542

>gb|AC160021.3| Pan troglodytes BAC clone CH251-564M21 from chromosome unknown, complete
              sequence
          Length = 201789

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 204    ttcacactggacaggaacaaggtc 227
              |||||| |||||||||||||||||
Sbjct: 195213 ttcacagtggacaggaacaaggtc 195236

>gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete sequence
          Length = 35427

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 84    gcggcgcggcgttcctcctcctcc 107
             ||||||||||| ||||||||||||
Sbjct: 26314 gcggcgcggcgctcctcctcctcc 26291

>gb|AC016933.20| Homo sapiens 3 BAC RP11-166D18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 153763

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 134   tctcctcttcaaagaggggttccc 157
             |||| |||||||||||||||||||
Sbjct: 93915 tctcatcttcaaagaggggttccc 93892

>gb|AC104365.4| Homo sapiens chromosome 18, clone RP11-108P20, complete sequence
          Length = 157871

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 57     tccacttcggagatccagcccgac 80
              ||||||| ||||||||||||||||
Sbjct: 133302 tccactttggagatccagcccgac 133325

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 241      tcattacatagttcaaagtc 260
                ||||||||||||||||||||
Sbjct: 27391527 tcattacatagttcaaagtc 27391546

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 386     acacggtggatttagaattt 405
               ||||||||||||||||||||
Sbjct: 7693670 acacggtggatttagaattt 7693689

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 76      ccgacccggcggcgcggcgt 95
               ||||||||||||||||||||
Sbjct: 7030890 ccgacccggcggcgcggcgt 7030871

>gb|AC010489.4|AC010489 Homo sapiens chromosome 5 clone CTD-2332G20, complete sequence
          Length = 146437

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 204   ttcacactggacaggaacaaggtc 227
             |||||| |||||||||||||||||
Sbjct: 57779 ttcacagtggacaggaacaaggtc 57756

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 412     ggtgatgaaaagaccatagt 431
               ||||||||||||||||||||
Sbjct: 2388691 ggtgatgaaaagaccatagt 2388672

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 386     acacggtggatttagaattt 405
               ||||||||||||||||||||
Sbjct: 7763757 acacggtggatttagaattt 7763776

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 241      tcattacatagttcaaagtc 260
                ||||||||||||||||||||
Sbjct: 27317127 tcattacatagttcaaagtc 27317146

>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124605

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   tcattacatagttcaaagtc 260
             ||||||||||||||||||||
Sbjct: 59847 tcattacatagttcaaagtc 59866

>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 96      tcctcctcctccttcgacca 115
               ||||||||||||||||||||
Sbjct: 2342197 tcctcctcctccttcgacca 2342216


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,293,774
Number of Sequences: 3902068
Number of extensions: 5293774
Number of successful extensions: 172287
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 171876
Number of HSP's gapped (non-prelim): 407
length of query: 493
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 471
effective length of database: 17,147,199,772
effective search space: 8076331092612
effective search space used: 8076331092612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)