Clone Name | bastl28b02 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AMOT_HUMAN (Q4VCS5) Angiomotin | 32 | 0.90 | 2 | ZN341_HUMAN (Q9BYN7) Zinc finger protein 341 | 32 | 1.2 | 3 | FIBP_ADE02 (P03275) Fiber protein (pIV) | 31 | 1.5 | 4 | RLMB_PSEAE (Q9HUM8) 23S rRNA (guanosine-2'-O-)-methyltransferase... | 29 | 7.6 | 5 | PPNK_NITMU (Q2Y6B0) Probable inorganic polyphosphate/ATP-NAD kin... | 29 | 7.6 | 6 | PATL2_ARATH (Q56ZI2) Patellin-2 | 29 | 7.6 |
---|
>AMOT_HUMAN (Q4VCS5) Angiomotin| Length = 1084 Score = 32.0 bits (71), Expect = 0.90 Identities = 19/50 (38%), Positives = 22/50 (44%) Frame = -1 Query: 189 APVAPLTACTGAVEVAPVAPLTARTGALEVAPVAQAQVAGRPRASRIACS 40 A VAP A AV+VAP AP AL P A A P ++ S Sbjct: 957 AAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQAPTS 1006
>ZN341_HUMAN (Q9BYN7) Zinc finger protein 341| Length = 854 Score = 31.6 bits (70), Expect = 1.2 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = -1 Query: 186 PVAPLTACTGAVEVAPVAPLTARTGALEVAPVAQAQVAGRPRASRIACS 40 P AP+T+ TG +P T +T + A + AG+P+A ++ CS Sbjct: 278 PAAPMTSATGGTVATFDSPATLKTRRAKGAR-GLPEAAGKPKAQKLKCS 325
>FIBP_ADE02 (P03275) Fiber protein (pIV)| Length = 582 Score = 31.2 bits (69), Expect = 1.5 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -1 Query: 180 APLTACTGAVEVAPVAPLTARTGALEVAPVAQAQV 76 APLT +GA+ VA APL +GAL V A V Sbjct: 103 APLTITSGALTVATTAPLIVTSGALSVQSQAPLTV 137 Score = 28.5 bits (62), Expect = 9.9 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -1 Query: 192 VAPVAPLTACTGAVEVAPVAPLTARTGALEVA 97 VA APL +GA+ V APLT + L +A Sbjct: 114 VATTAPLIVTSGALSVQSQAPLTVQDSKLSIA 145
>RLMB_PSEAE (Q9HUM8) 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB (EC| 2.1.1.-) (23S rRNA Gm2251 2'-O-methyltransferase) Length = 248 Score = 28.9 bits (63), Expect = 7.6 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +3 Query: 375 RLYGPHQVESAALEQHHPRRPRAAEWQTARHD 470 ++YG H VE AL +HHP+R + RHD Sbjct: 6 KVYGVHAVE--ALLRHHPKRVKQLWLAEGRHD 35
>PPNK_NITMU (Q2Y6B0) Probable inorganic polyphosphate/ATP-NAD kinase (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase) Length = 294 Score = 28.9 bits (63), Expect = 7.6 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = -1 Query: 153 VEVAPVAPLTARTGALEVAPVAQAQVA-GRPRASRIACSRHTHAAREENEKL 1 V + PV+P T + V P A ++ R +R+ H+H EEN+K+ Sbjct: 206 VALVPVSPHTLSNRPIVVGPDAAVEILMQRTAVARVHFDSHSHFDLEENDKV 257
>PATL2_ARATH (Q56ZI2) Patellin-2| Length = 683 Score = 28.9 bits (63), Expect = 7.6 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Frame = -1 Query: 195 EVAPVAPLTACTGAVEVAPVAPLTARTGALE-VAPVAQAQVA 73 E P AP+ A T E+ P AP+T T E V PV A Sbjct: 198 ETKPAAPVVAETKKEEILPAAPVTTETKVEEKVVPVETTPAA 239 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,609,067 Number of Sequences: 219361 Number of extensions: 476321 Number of successful extensions: 1855 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1755 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1853 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)