>MFP_ORYSA (Q8W1L6) Peroxisomal fatty acid beta-oxidation multifunctional|
           protein (MFP) [Includes: Enoyl-CoA hydratase (EC
           4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8);
           3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3);
           3-hydroxyacyl-CoA dehydrogenase
          Length = 725

 Score =  198 bits (504), Expect = 4e-51
 Identities = 97/107 (90%), Positives = 105/107 (98%)
 Frame = +3

Query: 102 MAGSIRVTMEVGADGVALITICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAG 281
           MAG+IRVTMEVGADGVA++TICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGA G
Sbjct: 1   MAGAIRVTMEVGADGVAVVTICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAGG 60

Query: 282 KFCGGFDINVFTKVHETGDVSLMPDVSVELVSNMMEDGKKPSVSAIQ 422
           KFCGGFDINVFT+VH+TG+VSLMPDVSVELVSN+ME GKKPSV+AIQ
Sbjct: 61  KFCGGFDINVFTEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQ 107

>MFPA_BRANA (O49809) Glyoxysomal fatty acid beta-oxidation multifunctional|
           protein MFP-a [Includes: Enoyl-CoA hydratase (EC
           4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8);
           3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3);
           3-hydroxyacyl-CoA dehydrogenase
          Length = 725

 Score =  100 bits (250), Expect = 1e-21
 Identities = 51/100 (51%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
 Frame = +3

Query: 123 TMEVGADGVALITICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFD 302
           T+EVGADGVA+IT+ NPPVN+L   ++  LK  Y EA+ R+DVKAIV+TGA GKF GGFD
Sbjct: 10  TIEVGADGVAVITLINPPVNSLSFDVLYSLKSNYEEALSRNDVKAIVVTGAKGKFSGGFD 69

Query: 303 INVFTKVHE-TGDVSLMPDVSVELVSNMMEDGKKPSVSAI 419
           I+ F ++ + T     +  +S++++++++E  KKPSV+AI
Sbjct: 70  ISGFGEIQKGTMKEPKVGYISIDILTDLLEAAKKPSVAAI 109

>MFPA_CUCSA (Q39659) Glyoxysomal fatty acid beta-oxidation multifunctional|
           protein MFP-a [Includes: Enoyl-CoA hydratase (EC
           4.2.1.17); 3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8);
           3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3);
           3-hydroxyacyl-CoA dehydrogenase
          Length = 725

 Score =  100 bits (249), Expect = 1e-21
 Identities = 50/102 (49%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
 Frame = +3

Query: 117 RVTMEVGADGVALITICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGG 296
           R  MEVG DGVA+ITI NPPVN+L   ++  L++ Y +A+ RDDVKAIV+TGA GKF GG
Sbjct: 8   RTVMEVGTDGVAIITIINPPVNSLSFDVLFSLRDSYEQALRRDDVKAIVVTGAKGKFSGG 67

Query: 297 FDINVFTKVH-ETGDVSLMPDVSVELVSNMMEDGKKPSVSAI 419
           FDI  F  +    G+   + ++S+E+++++ E  +KP+V+AI
Sbjct: 68  FDITAFGVLQGGKGEQPNVRNISIEMITDIFEAARKPAVAAI 109

>ECHP_CAVPO (P55100) Peroxisomal bifunctional enzyme (PBE) (PBFE) [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3,2-trans-enoyl-CoA
           isomerase (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase
           (EC 1.1.1.35)]
          Length = 725

 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 37/92 (40%), Positives = 53/92 (57%)
 Frame = +3

Query: 147 VALITICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFDINVFTKVH 326
           +ALI + NPPVNA+ P +I G+KE   +AM    +K IV++GA   FC G DI+ F+   
Sbjct: 10  LALIRLRNPPVNAISPAVIHGIKEGLQKAMSDYTIKGIVISGANNIFCAGADIHGFSAPL 69

Query: 327 ETGDVSLMPDVSVELVSNMMEDGKKPSVSAIQ 422
             G  S +  +  E     M+  +KP V+AIQ
Sbjct: 70  SFGTGSGLGPIVDE-----MQRYEKPVVAAIQ 96

>ECHP_RAT (P07896) Peroxisomal bifunctional enzyme (PBE) (PBFE) [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3,2-trans-enoyl-CoA
           isomerase (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase
           (EC 1.1.1.35)]
          Length = 721

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 32/92 (34%), Positives = 55/92 (59%)
 Frame = +3

Query: 147 VALITICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFDINVFTKVH 326
           +A+I +CNPPVNA+ P +I+ ++    +A     VKAIV+ GA G FC G DI+ F+   
Sbjct: 10  LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 66

Query: 327 ETGDVSLMPDVSVELVSNMMEDGKKPSVSAIQ 422
                +  P +++  + + ++  +KP ++AIQ
Sbjct: 67  -----AFTPGLALGSLVDEIQRYQKPVLAAIQ 93

>ECHP_HUMAN (Q08426) Peroxisomal bifunctional enzyme (PBE) (PBFE) [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3,2-trans-enoyl-CoA
           isomerase (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase
           (EC 1.1.1.35)]
          Length = 722

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 33/94 (35%), Positives = 52/94 (55%)
 Frame = +3

Query: 141 DGVALITICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFDINVFTK 320
           + +ALI + NPPVNA+   +++ +KE   +A     +KAIV+ GA GKF  G DI  F+ 
Sbjct: 8   NALALIRLRNPPVNAISTTLLRDIKEGLQKAGRDHTIKAIVICGAEGKFSAGADIRGFSA 67

Query: 321 VHETGDVSLMPDVSVELVSNMMEDGKKPSVSAIQ 422
               G       + +  V + ++  +KP V+AIQ
Sbjct: 68  PRTFG-------LILGHVVDEIQRNEKPVVAAIQ 94

>ECHP_MOUSE (Q9DBM2) Peroxisomal bifunctional enzyme (PBE) (PBFE) [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3,2-trans-enoyl-CoA
           isomerase (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase
           (EC 1.1.1.35)]
          Length = 717

 Score = 51.6 bits (122), Expect = 7e-07
 Identities = 32/92 (34%), Positives = 52/92 (56%)
 Frame = +3

Query: 147 VALITICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFDINVFTKVH 326
           +A+I +CNPPVNA+ P +I  ++    +A     V+AIV+ GA   FC G DI+ F    
Sbjct: 10  LAMIRLCNPPVNAISPTVITEVRNGLQKASLDHTVRAIVICGANDNFCAGADIHGFKS-- 67

Query: 327 ETGDVSLMPDVSVELVSNMMEDGKKPSVSAIQ 422
            TG       +++  + + ++  +KP V+AIQ
Sbjct: 68  PTG-------LTLGSLVDEIQRYQKPVVAAIQ 92

>MENB_ECOLI (P0ABU0) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 285

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
 Frame = +3

Query: 120 VTMEVGADGVALITICNPPV-NALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGK-FCG 293
           +  E   DG+A ITI  P V NA  P+ ++ + +  A+A   D++  I+LTGA  K FC 
Sbjct: 25  IRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCS 84

Query: 294 GFDINV 311
           G D  V
Sbjct: 85  GGDQKV 90

>MENB_ECOL6 (P0ABU1) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid|
           synthetase) (DHNA synthetase)
          Length = 285

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
 Frame = +3

Query: 120 VTMEVGADGVALITICNPPV-NALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGK-FCG 293
           +  E   DG+A ITI  P V NA  P+ ++ + +  A+A   D++  I+LTGA  K FC 
Sbjct: 25  IRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCS 84

Query: 294 GFDINV 311
           G D  V
Sbjct: 85  GGDQKV 90

>FADJ_IDILO (Q5QXM1) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 708

 Score = 35.8 bits (81), Expect = 0.042
 Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
 Frame = +3

Query: 123 TMEVGADGVALITICNPPVNALHPIIIQGLKEKYAE----AMDR----DDVKAIV-LTGA 275
           TMEV  DGVA+ITI  P  +      +  LK+ +AE     M+R    D VK +V ++G 
Sbjct: 8   TMEVRDDGVAVITIDVPGES------MNTLKDSFAEEVGSLMNRLESDDSVKGVVFISGK 61

Query: 276 AGKFCGGFDINV 311
            G F  G DIN+
Sbjct: 62  PGSFIAGADINM 73

>ECHH_RHOCA (P24162) Probable enoyl-CoA hydratase (EC 4.2.1.17)|
          Length = 257

 Score = 34.7 bits (78), Expect = 0.094
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +3

Query: 138 ADGVALITICNPPV-NALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFDI 305
           ++G+A+IT+  P V NAL+  +   L      A  R + +AIVLTG+   FC G D+
Sbjct: 11  SEGLAVITLDRPEVMNALNAAMRHELTAALHRA--RGEARAIVLTGSGRAFCSGQDL 65

>ECHA8_MYCTU (P64016) Probable enoyl-CoA hydratase echA8 (EC 4.2.1.17)|
          Length = 257

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 147 VALITICNPP-VNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFDI 305
           V +IT+  P  +NAL+  ++  +     E  D  D+ AI++TG+A  F  G DI
Sbjct: 14  VGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADI 67

>ECHA8_MYCBO (P64017) Probable enoyl-CoA hydratase echA8 (EC 4.2.1.17)|
          Length = 257

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +3

Query: 147 VALITICNPP-VNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFDI 305
           V +IT+  P  +NAL+  ++  +     E  D  D+ AI++TG+A  F  G DI
Sbjct: 14  VGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADI 67

>ECH14_MYCTU (P64018) Probable enoyl-CoA hydratase echA14 (EC 4.2.1.17)|
          Length = 256

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 147 VALITICNPPV-NALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFDIN 308
           VALIT+ +P   NA+   +   L+     A    DV A+V+TGA   FC G D++
Sbjct: 15  VALITVNDPDRRNAVTDEMSAQLRAAIQRAEGDPDVHAVVVTGAGKAFCAGADLS 69

>ECH14_MYCBO (P64019) Probable enoyl-CoA hydratase echA14 (EC 4.2.1.17)|
          Length = 256

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 147 VALITICNPPV-NALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFDIN 308
           VALIT+ +P   NA+   +   L+     A    DV A+V+TGA   FC G D++
Sbjct: 15  VALITVNDPDRRNAVTDEMSAQLRAAIQRAEGDPDVHAVVVTGAGKAFCAGADLS 69

>ECHA6_MYCLE (Q50130) Probable enoyl-CoA hydratase echA6 (EC 4.2.1.17)|
          Length = 247

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
 Frame = +3

Query: 138 ADGVALITICNPPV-NALHPIIIQGLKEKYAEAMDRDD---VKAIVLTGAAGKFCGGFDI 305
           A+GV  I +  P   NAL+  +I+ L+E   +A   D     + IVLTG    FC G D+
Sbjct: 7   AEGVMTIELQRPERRNALNSQLIEKLREAVQKASSADSEVSTRVIVLTGQGTVFCAGADL 66

Query: 306 N 308
           +
Sbjct: 67  S 67

>DXR_NEIMB (Q9K1G8) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC|
           1.1.1.267) (DXP reductoisomerase)
           (1-deoxyxylulose-5-phosphate reductoisomerase)
           (2-C-methyl-D-erythritol 4-phosphate synthase)
          Length = 394

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 18/62 (29%), Positives = 33/62 (53%)
 Frame = +3

Query: 138 ADGVALITICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFDINVFT 317
           A+G A++     PV++ H  + Q L   YA  ++   + +I+LT + G F    D+N F 
Sbjct: 143 ANGAAVL-----PVDSEHNAVFQVLPRDYAGRLNEHGIASIILTASGGPFLTA-DLNTFD 196

Query: 318 KV 323
           ++
Sbjct: 197 RI 198

>ECH12_MYCLE (P53526) Probable enoyl-CoA hydratase echA12 (EC 4.2.1.17)|
          Length = 294

 Score = 32.3 bits (72), Expect = 0.46
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +3

Query: 120 VTMEVGADGVALITICNPP-VNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGG 296
           V ++     VALIT+  P  +N++   +++ LK+          V+ +VLTGA   FC G
Sbjct: 22  VVLDFPRPEVALITLNRPGRMNSMALDLMKSLKQVLKRITYDHSVRVVVLTGAGRGFCSG 81

Query: 297 FD 302
            D
Sbjct: 82  AD 83

>ECHA6_MYCTU (P64014) Probable enoyl-CoA hydratase echA6 (EC 4.2.1.17)|
          Length = 243

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
 Frame = +3

Query: 138 ADGVALITICNPPV-NALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFDI--- 305
           A+ V  I +  P   NAL+  +++ L +   +A D    +AIVLTG    FC G D+   
Sbjct: 7   AEAVLTIELQRPERRNALNSQLVEELTQAIRKAGD-GSARAIVLTGQGTAFCAGADLSGD 65

Query: 306 -------NVFTKVHETGDVSLMPDV 359
                  +   ++H+  D S MP V
Sbjct: 66  AFAADYPDRLIELHKAMDASPMPVV 90

>ECHA6_MYCBO (P64015) Probable enoyl-CoA hydratase echA6 (EC 4.2.1.17)|
          Length = 243

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
 Frame = +3

Query: 138 ADGVALITICNPPV-NALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFDI--- 305
           A+ V  I +  P   NAL+  +++ L +   +A D    +AIVLTG    FC G D+   
Sbjct: 7   AEAVLTIELQRPERRNALNSQLVEELTQAIRKAGD-GSARAIVLTGQGTAFCAGADLSGD 65

Query: 306 -------NVFTKVHETGDVSLMPDV 359
                  +   ++H+  D S MP V
Sbjct: 66  AFAADYPDRLIELHKAMDASPMPVV 90

>DXR_NEIMA (Q9JX33) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC|
           1.1.1.267) (DXP reductoisomerase)
           (1-deoxyxylulose-5-phosphate reductoisomerase)
           (2-C-methyl-D-erythritol 4-phosphate synthase)
          Length = 394

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 26/93 (27%), Positives = 45/93 (48%)
 Frame = +3

Query: 138 ADGVALITICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFDINVFT 317
           A+G A++     PV++ H  + Q L   Y   ++   + +I+LT + G F    D+N F 
Sbjct: 143 ANGAAVL-----PVDSEHNAVFQVLPRDYTGRLNEHGIASIILTASGGPFLTA-DLNTFD 196

Query: 318 KVHETGDVSLMPDVSVELVSNMMEDGKKPSVSA 416
                   S+ PD +V+  +  M  G+K SV +
Sbjct: 197 --------SITPDQAVKHPNWRM--GRKISVDS 219

>DXR_CHRVO (Q7NVY8) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC|
           1.1.1.267) (DXP reductoisomerase)
           (1-deoxyxylulose-5-phosphate reductoisomerase)
           (2-C-methyl-D-erythritol 4-phosphate synthase)
          Length = 394

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 20/52 (38%), Positives = 26/52 (50%)
 Frame = +3

Query: 132 VGADGVALITICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKF 287
           V A G AL+     PV++ H  I Q L   YA   D   V+ I+LT + G F
Sbjct: 142 VRASGSALL-----PVDSEHSAIFQSLPADYAGNPDGAGVRKIILTASGGPF 188

>YKB4_CAEEL (P41942) Hypothetical protein B0272.4 in chromosome III|
          Length = 255

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
 Frame = +3

Query: 141 DGVALITICNPP-VNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGK-FCGGFD---- 302
           + V  +T+  P   NAL   +   L   + +A D DD+  +V TG  GK +C G D    
Sbjct: 12  NNVLWVTLNRPKKFNALTRQMFLDLCTVFNDAADDDDIAFVVFTGGKGKYYCAGSDFSPA 71

Query: 303 -INVFTKVHETG 335
            ++  T + E G
Sbjct: 72  ELSTLTDIQEHG 83

>PAAG_ECOLI (P77467) Probable enoyl-CoA hydratase paaG (EC 4.2.1.17)|
          Length = 262

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +3

Query: 144 GVALITICNPP-VNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFDIN 308
           GV  +T+  P  +N+ +  +   L E   +    D ++ ++LTGA   FC G D+N
Sbjct: 12  GVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLN 67

>TRPA_HALVO (P18284) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 277

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +3

Query: 237 DRDDVKAIVLTGAAGKFCGGFDINVFTKVHETGDVSLMPDVSVELVSNMMEDG 395
           D D  + IV +GA G   G   +++  + HE GD +      +E ++  +EDG
Sbjct: 210 DGDHAERIVASGADGIIVGSALVDIVAEGHENGDDAETVADRLETLARELEDG 262

>D3D2_HUMAN (P42126) 3,2-trans-enoyl-CoA isomerase, mitochondrial precursor (EC|
           5.3.3.8) (Dodecenoyl-CoA isomerase)
           (Delta(3),delta(2)-enoyl-CoA isomerase) (D3,D2-enoyl-CoA
           isomerase)
          Length = 302

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = +3

Query: 108 GSIRVTMEVGAD-GVALITICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTG-AAG 281
           GS RV +E  A  GVA++   NPPVN+L    +  L     +  +    + ++LT    G
Sbjct: 43  GSQRVLVEPDAGAGVAVMKFKNPPVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPG 102

Query: 282 KFCGGFDI 305
            F  G D+
Sbjct: 103 VFSAGLDL 110

>ECHM_CAEEL (P34559) Probable enoyl-CoA hydratase, mitochondrial (EC 4.2.1.17)|
          Length = 288

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
 Frame = +3

Query: 147 VALITICNPP-VNALHPIIIQGLKEKYAEAMDRD-DVKAIVLTGAAGKFCGGFDINVFTK 320
           VALI +  P  +NAL   ++  L +   E +D D  V AIV+TG+   F  G DI   T 
Sbjct: 45  VALIKLNRPKALNALCAQLMTELADAL-EVLDTDKSVGAIVITGSERAFAAGADIKEMT- 102

Query: 321 VHETGDVSLMPDVSVELVSN--MMEDGKKPSVSAI 419
                +       S   +SN   + D KKP ++A+
Sbjct: 103 -----NNEFATTFSGSFLSNWTAVSDVKKPVIAAV 132

>DXR_NEIG1 (Q5F5X0) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC|
           1.1.1.267) (DXP reductoisomerase)
           (1-deoxyxylulose-5-phosphate reductoisomerase)
           (2-C-methyl-D-erythritol 4-phosphate synthase)
          Length = 394

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +3

Query: 138 ADGVALITICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKF 287
           A+G A++     PV++ H  I Q L   Y + ++   + +I+LT + G F
Sbjct: 143 ANGAAVL-----PVDSEHNAIFQVLPRDYTDRLNEHGIDSIILTASGGPF 187

>CRT_CLOAB (P52046) 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) (Crotonase)|
          Length = 261

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
 Frame = +3

Query: 147 VALITICNPP-VNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGK-FCGGFDIN 308
           VA++TI  P  +NAL+   ++ +     E  +  +V A++LTGA  K F  G DI+
Sbjct: 14  VAVVTINRPKALNALNSDTLKEMDYVIGEIENDSEVLAVILTGAGEKSFVAGADIS 69

>ECH12_MYCBO (Q7U004) Probable enoyl-CoA hydratase echA12 (EC 4.2.1.17)|
          Length = 285

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +3

Query: 147 VALITICNPP-VNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFD 302
           +A IT+  P  +N++   ++  LKE  A+    + V+ +VLTGA   F  G D
Sbjct: 29  IAQITLNRPERMNSMAFDVMVPLKEALAQVSYDNSVRVVVLTGAGRGFSSGAD 81

>D3D2_MOUSE (P42125) 3,2-trans-enoyl-CoA isomerase, mitochondrial precursor (EC|
           5.3.3.8) (Dodecenoyl-CoA isomerase)
           (Delta(3),delta(2)-enoyl-CoA isomerase) (D3,D2-enoyl-CoA
           isomerase)
          Length = 289

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +3

Query: 117 RVTMEV-GADGVALITICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTG-AAGKFC 290
           RV +E  G  GVA++ + NPPVN+L    +        +  +   ++ ++LT    G F 
Sbjct: 33  RVLVETEGPAGVAVMKLRNPPVNSLSLECLTEFTISLEKLENDKSIRGVILTSECPGIFS 92

Query: 291 GGFDI 305
            G D+
Sbjct: 93  AGLDL 97

>GYRA_SALTY (P37411) DNA gyrase subunit A (EC 5.99.1.3)|
          Length = 878

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
 Frame = -3

Query: 212 EPLDDDGVQSIDWRVADGDERDAVCA----DLHGDAD 114
           EP+DD+ + +ID  VA+GDE  A  A    D+  DAD
Sbjct: 841 EPVDDEELDAIDGSVAEGDEDIAPEAESDDDVADDAD 877

>ATPG_HELPY (P56082) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1|
           sector gamma subunit)
          Length = 301

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +3

Query: 201 IQGLKEKYAEAMDRDDVKA--IVLTGAAGKFCGGFDINVFTKVHETGDVSLMPDVSVEL 371
           I+ ++ KY   ++R ++K   I+   A    CGGF+ N   KV    +     D+ V L
Sbjct: 65  IEDIQSKYFRELERLEIKKVDIIFITADKGLCGGFNTNTIKKVLACTNEYKEKDIKVRL 123

>ATPG_HELPJ (Q9ZK80) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1|
           sector gamma subunit)
          Length = 301

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +3

Query: 201 IQGLKEKYAEAMDRDDVKA--IVLTGAAGKFCGGFDINVFTKVHETGDVSLMPDVSVEL 371
           I+ ++ KY   ++R ++K   I+   A    CGGF+ N   KV    +     D+ V L
Sbjct: 65  IEDIQSKYFRELERLEIKKVDIIFITADKGLCGGFNTNTIKKVLACTNEYKEKDIKVRL 123

>GYRA_KLEOX (P14829) DNA gyrase subunit A (EC 5.99.1.3)|
          Length = 876

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 212 EPLDDDGVQSIDWRVADGDERDAVCADLHGD 120
           EP+DD+ + +ID   A+GDE  A  AD   D
Sbjct: 840 EPVDDEELDAIDGSAAEGDEDIAPEADTDDD 870

>AQPZ1_AGRT5 (Q8UI24) Aquaporin Z 1|
          Length = 241

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +3

Query: 258 IVLTGAAGKFCGGFDINVFTKVHETGDVSLMPDVSVELV 374
           ++LTG AG   GGF  N + + H  G  SL+  + +E++
Sbjct: 101 VILTGKAGAEIGGFAANGYGE-HSPGGYSLLSALLIEII 138

>ECH12_MYCTU (O53163) Probable enoyl-CoA hydratase echA12 (EC 4.2.1.17)|
          Length = 285

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +3

Query: 147 VALITICNPP-VNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAAGKFCGGFD 302
           +A IT+  P  +N++   ++  LKE  A+    + V+ +VLTGA   F  G D
Sbjct: 29  IAQITLNRPERMNSMAFDVMVPLKEALAQVSYDNSVRVVVLTGAGRGFSPGAD 81

>CDAN1_HUMAN (Q8IWY9) Codanin-1|
          Length = 1226

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -3

Query: 320 FCEDIDIKAST-KFPRSTSEHDGLDVVAIHGLRVLLLEPLDDDGVQSIDWR 171
           F  D  + AS+ +F +   +   L +  ++GL +   EP D+DG   +DW+
Sbjct: 569 FFRDFILSASSFQFNQHLMDSLSLKIQELNGLALPQHEPNDEDGESDVDWQ 619


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,695,041
Number of Sequences: 219361
Number of extensions: 997604
Number of successful extensions: 3310
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 3240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3307
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)