ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl28a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464920.1| Oryza sativa (japonica cultivar-group), mRNA 398 e-108
2gb|AF442962.1|AF442962 Oryza sativa peroxisomal multifunctional ... 398 e-108
3dbj|AK103620.1| Oryza sativa (japonica cultivar-group) cDNA clon... 398 e-108
4dbj|AK103234.1| Oryza sativa (japonica cultivar-group) cDNA clon... 398 e-108
5dbj|AK073294.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
6gb|AF220609.1| Oryza sativa multifunctional protein mRNA, comple... 367 2e-98
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 133 5e-28
8dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic D... 133 5e-28
9ref|NM_119045.2| Arabidopsis thaliana AIM1 (ABNORMAL INFLORESCEN... 78 3e-11
10gb|AY096659.1| Arabidopsis thaliana putative AIM1 protein (At4g2... 78 3e-11
11gb|AY072072.1| Arabidopsis thaliana putative AIM1 protein (At4g2... 78 3e-11
12gb|AY059815.1| Arabidopsis thaliana AIM1 protein (At4g29010; F19... 78 3e-11
13dbj|AK221468.1| Arabidopsis thaliana mRNA for AIM1 protein, comp... 78 3e-11
14ref|NM_184007.1| Oryza sativa (japonica cultivar-group), predic... 72 2e-09
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
16dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
17dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
18dbj|AK100444.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
19emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, ... 60 6e-06
20emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, B... 60 6e-06
21emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, B... 60 6e-06
22gb|AF123253.1|AF123253 Arabidopsis thaliana AIM1 protein (AIM1) ... 60 6e-06
23ref|NM_185270.1| Oryza sativa (japonica cultivar-group), predic... 52 0.001
24gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
25dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
26dbj|AK102420.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
27emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 48 0.023
28emb|AL732555.7| Mouse DNA sequence from clone RP23-124I19 on chr... 44 0.36
29gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 42 1.4
30gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 42 1.4
31dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
32dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
33dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
34dbj|AK100322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
35emb|CR388225.18| Zebrafish DNA sequence from clone CH211-193C1 i... 42 1.4
36emb|AL772179.17| Mouse DNA sequence from clone RP23-100B18 on ch... 42 1.4
37gb|AC004606.1|AC004606 Homo sapiens chromosome 17, clone hRPC.10... 42 1.4
38dbj|AB071299.1| Oryza sativa OsARF10 mRNA for auxin response fac... 42 1.4
39gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 5.7
40ref|XM_800078.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.7
41emb|AL358075.10| Human DNA sequence from clone RP4-533D7 on chro... 40 5.7
42emb|BX323793.10| Zebrafish DNA sequence from clone DKEY-185P18 i... 40 5.7
43dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 5.7
44ref|XM_695366.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 5.7
45gb|AF322013.1|AF322012S2 Bradyrhizobium japonicum symbiotic gene... 40 5.7
46dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.7
47gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 5.7
48gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 5.7
49gb|AC005884.1|AC005884 Homo sapiens chromosome 17, clone hRPK.2... 40 5.7 
>ref|XM_464920.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2793

 Score =  398 bits (201), Expect = e-108
 Identities = 294/325 (90%)
 Strand = Plus / Plus

                                                                       
Query: 100 ccatggcggggtcgatccgcgtcaccatggaggtcggcgcagacggcgtcgcgctcatca 159
           ||||||||||| |||||||||||||||||||||| ||||| |||||||||||| || |||
Sbjct: 103 ccatggcgggggcgatccgcgtcaccatggaggtgggcgccgacggcgtcgcggtcgtca 162

                                                                       
Query: 160 ccatctgcaacccgccagtcaatgctctgcaccccatcatcatccaggggctcaaggaga 219
           |||||||||||||||| |||||||| ||||| |||||||||||||||||  | |||||||
Sbjct: 163 ccatctgcaacccgcccgtcaatgcgctgcatcccatcatcatccagggattgaaggaga 222

                                                                       
Query: 220 agtacgcggaggccatggatcgcgacgacgtcaaggccatcgtgctcactggtgctgcgg 279
           ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||  |
Sbjct: 223 agtacgcggaggcgatggatcgcgacgacgtcaaggccatcgtgctcaccggtgctggag 282

                                                                       
Query: 280 ggaaattttgtggaggctttgatatcaatgtcttcacaaaagttcatgagactggagatg 339
           | ||||||||||||||||||||||||||||| |||||| |||||||  |||||||| |||
Sbjct: 283 gcaaattttgtggaggctttgatatcaatgtgttcacagaagttcacaagactggaaatg 342

                                                                       
Query: 340 tgtcacttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaagatggcaaaa 399
           | || |||||||||||||||||||||||||||||||| ||  |||||||||  |||||||
Sbjct: 343 tatctcttatgcctgatgtatctgttgagcttgtgtcgaatttgatggaagcgggcaaaa 402

                                    
Query: 400 agccttctgtttctgcaattcaagg 424
           ||||||| ||| |||| ||||||||
Sbjct: 403 agccttcagttgctgccattcaagg 427
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>gb|AF442962.1|AF442962 Oryza sativa peroxisomal multifunctional protein mRNA, complete cds
          Length = 2637

 Score =  398 bits (201), Expect = e-108
 Identities = 294/325 (90%)
 Strand = Plus / Plus

                                                                       
Query: 100 ccatggcggggtcgatccgcgtcaccatggaggtcggcgcagacggcgtcgcgctcatca 159
           ||||||||||| |||||||||||||||||||||| ||||| |||||||||||| || |||
Sbjct: 181 ccatggcgggggcgatccgcgtcaccatggaggtgggcgccgacggcgtcgcggtcgtca 240

                                                                       
Query: 160 ccatctgcaacccgccagtcaatgctctgcaccccatcatcatccaggggctcaaggaga 219
           |||||||||||||||| |||||||| ||||| |||||||||||||||||  | |||||||
Sbjct: 241 ccatctgcaacccgcccgtcaatgcgctgcatcccatcatcatccagggattgaaggaga 300

                                                                       
Query: 220 agtacgcggaggccatggatcgcgacgacgtcaaggccatcgtgctcactggtgctgcgg 279
           ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||  |
Sbjct: 301 agtacgcggaggcgatggatcgcgacgacgtcaaggccatcgtgctcaccggtgctggag 360

                                                                       
Query: 280 ggaaattttgtggaggctttgatatcaatgtcttcacaaaagttcatgagactggagatg 339
           | ||||||||||||||||||||||||||||| |||||| |||||||  |||||||| |||
Sbjct: 361 gcaaattttgtggaggctttgatatcaatgtgttcacagaagttcacaagactggaaatg 420

                                                                       
Query: 340 tgtcacttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaagatggcaaaa 399
           | || |||||||||||||||||||||||||||||||| ||  |||||||||  |||||||
Sbjct: 421 tatctcttatgcctgatgtatctgttgagcttgtgtcgaatttgatggaagcgggcaaaa 480

                                    
Query: 400 agccttctgtttctgcaattcaagg 424
           ||||||| ||| |||| ||||||||
Sbjct: 481 agccttcagttgctgccattcaagg 505
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>dbj|AK103620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133M03, full
           insert sequence
          Length = 4430

 Score =  398 bits (201), Expect = e-108
 Identities = 294/325 (90%)
 Strand = Plus / Plus

                                                                       
Query: 100 ccatggcggggtcgatccgcgtcaccatggaggtcggcgcagacggcgtcgcgctcatca 159
           ||||||||||| |||||||||||||||||||||| ||||| |||||||||||| || |||
Sbjct: 112 ccatggcgggggcgatccgcgtcaccatggaggtgggcgccgacggcgtcgcggtcgtca 171

                                                                       
Query: 160 ccatctgcaacccgccagtcaatgctctgcaccccatcatcatccaggggctcaaggaga 219
           |||||||||||||||| |||||||| ||||| |||||||||||||||||  | |||||||
Sbjct: 172 ccatctgcaacccgcccgtcaatgcgctgcatcccatcatcatccagggattgaaggaga 231

                                                                       
Query: 220 agtacgcggaggccatggatcgcgacgacgtcaaggccatcgtgctcactggtgctgcgg 279
           ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||  |
Sbjct: 232 agtacgcggaggcgatggatcgcgacgacgtcaaggccatcgtgctcaccggtgctggag 291

                                                                       
Query: 280 ggaaattttgtggaggctttgatatcaatgtcttcacaaaagttcatgagactggagatg 339
           | ||||||||||||||||||||||||||||| |||||| |||||||  |||||||| |||
Sbjct: 292 gcaaattttgtggaggctttgatatcaatgtgttcacagaagttcacaagactggaaatg 351

                                                                       
Query: 340 tgtcacttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaagatggcaaaa 399
           | || |||||||||||||||||||||||||||||||| ||  |||||||||  |||||||
Sbjct: 352 tatctcttatgcctgatgtatctgttgagcttgtgtcgaatttgatggaagcgggcaaaa 411

                                    
Query: 400 agccttctgtttctgcaattcaagg 424
           ||||||| ||| |||| ||||||||
Sbjct: 412 agccttcagttgctgccattcaagg 436
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>dbj|AK103234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123F01, full
           insert sequence
          Length = 3428

 Score =  398 bits (201), Expect = e-108
 Identities = 294/325 (90%)
 Strand = Plus / Plus

                                                                       
Query: 100 ccatggcggggtcgatccgcgtcaccatggaggtcggcgcagacggcgtcgcgctcatca 159
           ||||||||||| |||||||||||||||||||||| ||||| |||||||||||| || |||
Sbjct: 105 ccatggcgggggcgatccgcgtcaccatggaggtgggcgccgacggcgtcgcggtcgtca 164

                                                                       
Query: 160 ccatctgcaacccgccagtcaatgctctgcaccccatcatcatccaggggctcaaggaga 219
           |||||||||||||||| |||||||| ||||| |||||||||||||||||  | |||||||
Sbjct: 165 ccatctgcaacccgcccgtcaatgcgctgcatcccatcatcatccagggattgaaggaga 224

                                                                       
Query: 220 agtacgcggaggccatggatcgcgacgacgtcaaggccatcgtgctcactggtgctgcgg 279
           ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||  |
Sbjct: 225 agtacgcggaggcgatggatcgcgacgacgtcaaggccatcgtgctcaccggtgctggag 284

                                                                       
Query: 280 ggaaattttgtggaggctttgatatcaatgtcttcacaaaagttcatgagactggagatg 339
           | ||||||||||||||||||||||||||||| |||||| |||||||  |||||||| |||
Sbjct: 285 gcaaattttgtggaggctttgatatcaatgtgttcacagaagttcacaagactggaaatg 344

                                                                       
Query: 340 tgtcacttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaagatggcaaaa 399
           | || |||||||||||||||||||||||||||||||| ||  |||||||||  |||||||
Sbjct: 345 tatctcttatgcctgatgtatctgttgagcttgtgtcgaatttgatggaagcgggcaaaa 404

                                    
Query: 400 agccttctgtttctgcaattcaagg 424
           ||||||| ||| |||| ||||||||
Sbjct: 405 agccttcagttgctgccattcaagg 429
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>dbj|AK073294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025B12, full
           insert sequence
          Length = 2793

 Score =  391 bits (197), Expect = e-105
 Identities = 293/325 (90%)
 Strand = Plus / Plus

                                                                       
Query: 100 ccatggcggggtcgatccgcgtcaccatggaggtcggcgcagacggcgtcgcgctcatca 159
           ||||||||||| ||||||||||| |||||||||| ||||| |||||||||||| || |||
Sbjct: 103 ccatggcgggggcgatccgcgtcgccatggaggtgggcgccgacggcgtcgcggtcgtca 162

                                                                       
Query: 160 ccatctgcaacccgccagtcaatgctctgcaccccatcatcatccaggggctcaaggaga 219
           |||||||||||||||| |||||||| ||||| |||||||||||||||||  | |||||||
Sbjct: 163 ccatctgcaacccgcccgtcaatgcgctgcatcccatcatcatccagggattgaaggaga 222

                                                                       
Query: 220 agtacgcggaggccatggatcgcgacgacgtcaaggccatcgtgctcactggtgctgcgg 279
           ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||  |
Sbjct: 223 agtacgcggaggcgatggatcgcgacgacgtcaaggccatcgtgctcaccggtgctggag 282

                                                                       
Query: 280 ggaaattttgtggaggctttgatatcaatgtcttcacaaaagttcatgagactggagatg 339
           | ||||||||||||||||||||||||||||| |||||| |||||||  |||||||| |||
Sbjct: 283 gcaaattttgtggaggctttgatatcaatgtgttcacagaagttcacaagactggaaatg 342

                                                                       
Query: 340 tgtcacttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaagatggcaaaa 399
           | || |||||||||||||||||||||||||||||||| ||  |||||||||  |||||||
Sbjct: 343 tatctcttatgcctgatgtatctgttgagcttgtgtcgaatttgatggaagcgggcaaaa 402

                                    
Query: 400 agccttctgtttctgcaattcaagg 424
           ||||||| ||| |||| ||||||||
Sbjct: 403 agccttcagttgctgccattcaagg 427
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>gb|AF220609.1| Oryza sativa multifunctional protein mRNA, complete cds
          Length = 2241

 Score =  367 bits (185), Expect = 2e-98
 Identities = 275/305 (90%)
 Strand = Plus / Plus

                                                                       
Query: 120 gtcaccatggaggtcggcgcagacggcgtcgcgctcatcaccatctgcaacccgccagtc 179
           |||||||||||||| ||||| |||||||||||| || ||||||||||||||||||| |||
Sbjct: 1   gtcaccatggaggtgggcgccgacggcgtcgcggtcgtcaccatctgcaacccgcccgtc 60

                                                                       
Query: 180 aatgctctgcaccccatcatcatccaggggctcaaggagaagtacgcggaggccatggat 239
           ||||| ||||| |||||||||||||||||  | |||||||||||||||||||| ||||||
Sbjct: 61  aatgcgctgcatcccatcatcatccagggattgaaggagaagtacgcggaggcgatggat 120

                                                                       
Query: 240 cgcgacgacgtcaaggccatcgtgctcactggtgctgcggggaaattttgtggaggcttt 299
           ||||||||||||||||||||||||||||| |||||||  || ||||||||||||||||||
Sbjct: 121 cgcgacgacgtcaaggccatcgtgctcaccggtgctggaggcaaattttgtggaggcttt 180

                                                                       
Query: 300 gatatcaatgtcttcacaaaagttcatgagactggagatgtgtcacttatgcctgatgta 359
           ||||||||||| |||||| |||||||  |||||||| |||| || |||||||||||||||
Sbjct: 181 gatatcaatgtgttcacagaagttcacaagactggaaatgtatctcttatgcctgatgta 240

                                                                       
Query: 360 tctgttgagcttgtgtcaaacatgatggaagatggcaaaaagccttctgtttctgcaatt 419
           ||||||||||||||||| ||  |||||||||  |||||||||||||| ||| |||| |||
Sbjct: 241 tctgttgagcttgtgtcgaatttgatggaagcgggcaaaaagccttcagttgctgccatt 300

                
Query: 420 caagg 424
           |||||
Sbjct: 301 caagg 305
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  133 bits (67), Expect = 5e-28
 Identities = 91/99 (91%)
 Strand = Plus / Plus

                                                                            
Query: 100      ccatggcggggtcgatccgcgtcaccatggaggtcggcgcagacggcgtcgcgctcatca 159
                ||||||||||| |||||||||||||||||||||| ||||| |||||||||||| || |||
Sbjct: 10000742 ccatggcgggggcgatccgcgtcaccatggaggtgggcgccgacggcgtcgcggtcgtca 10000801

                                                       
Query: 160      ccatctgcaacccgccagtcaatgctctgcaccccatca 198
                |||||||||||||||| |||||||| ||||| |||||||
Sbjct: 10000802 ccatctgcaacccgcccgtcaatgcgctgcatcccatca 10000840



 Score =  109 bits (55), Expect = 7e-21
 Identities = 70/75 (93%)
 Strand = Plus / Plus

                                                                            
Query: 199      tcatccaggggctcaaggagaagtacgcggaggccatggatcgcgacgacgtcaaggcca 258
                ||||||||||  | |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 10000952 tcatccagggattgaaggagaagtacgcggaggcgatggatcgcgacgacgtcaaggcca 10001011

                               
Query: 259      tcgtgctcactggtg 273
                |||||||||| ||||
Sbjct: 10001012 tcgtgctcaccggtg 10001026



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                     
Query: 282      aaattttgtggaggctttgatatcaatgtcttcacaaaagttcatgagactgg 334
                ||||||||||||||||||||||||||||| |||||| |||||||  |||||||
Sbjct: 10001797 aaattttgtggaggctttgatatcaatgtgttcacagaagttcacaagactgg 10001849



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 345      cttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaag 390
                |||||||||||||||||||||||||||||||| ||  |||||||||
Sbjct: 10001963 cttatgcctgatgtatctgttgagcttgtgtcgaatttgatggaag 10002008



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 393      ggcaaaaagccttctgtttctgcaattcaagg 424
                |||||||||||||| ||| |||| ||||||||
Sbjct: 10002161 ggcaaaaagccttcagttgctgccattcaagg 10002192
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>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0413A11
          Length = 188440

 Score =  133 bits (67), Expect = 5e-28
 Identities = 91/99 (91%)
 Strand = Plus / Plus

                                                                         
Query: 100   ccatggcggggtcgatccgcgtcaccatggaggtcggcgcagacggcgtcgcgctcatca 159
             ||||||||||| |||||||||||||||||||||| ||||| |||||||||||| || |||
Sbjct: 75435 ccatggcgggggcgatccgcgtcaccatggaggtgggcgccgacggcgtcgcggtcgtca 75494

                                                    
Query: 160   ccatctgcaacccgccagtcaatgctctgcaccccatca 198
             |||||||||||||||| |||||||| ||||| |||||||
Sbjct: 75495 ccatctgcaacccgcccgtcaatgcgctgcatcccatca 75533



 Score =  109 bits (55), Expect = 7e-21
 Identities = 70/75 (93%)
 Strand = Plus / Plus

                                                                         
Query: 199   tcatccaggggctcaaggagaagtacgcggaggccatggatcgcgacgacgtcaaggcca 258
             ||||||||||  | |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 75645 tcatccagggattgaaggagaagtacgcggaggcgatggatcgcgacgacgtcaaggcca 75704

                            
Query: 259   tcgtgctcactggtg 273
             |||||||||| ||||
Sbjct: 75705 tcgtgctcaccggtg 75719



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                  
Query: 282   aaattttgtggaggctttgatatcaatgtcttcacaaaagttcatgagactgg 334
             ||||||||||||||||||||||||||||| |||||| |||||||  |||||||
Sbjct: 76490 aaattttgtggaggctttgatatcaatgtgttcacagaagttcacaagactgg 76542



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                           
Query: 345   cttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaag 390
             |||||||||||||||||||||||||||||||| ||  |||||||||
Sbjct: 76656 cttatgcctgatgtatctgttgagcttgtgtcgaatttgatggaag 76701



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 393   ggcaaaaagccttctgtttctgcaattcaagg 424
             |||||||||||||| ||| |||| ||||||||
Sbjct: 76854 ggcaaaaagccttcagttgctgccattcaagg 76885
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>ref|NM_119045.2| Arabidopsis thaliana AIM1 (ABNORMAL INFLORESCENCE MERISTEM);
           enoyl-CoA hydratase AT4G29010 (AIM1) mRNA, complete cds
          Length = 2849

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                       
Query: 297 tttgatatcaatgtcttcacaaaagttcatgagactggagatgtgtcacttatgcctgat 356
           |||||||||||||||||     |||||||| ||||||| ||| | || ||||||||||| 
Sbjct: 240 tttgatatcaatgtctttcagcaagttcataagactggggatttatcgcttatgcctgaa 299

                                              
Query: 357 gtatctgttgagcttgtgtcaaacatgatggaaga 391
           |||||||||||||||||||  ||| ||||||||||
Sbjct: 300 gtatctgttgagcttgtgtgtaacctgatggaaga 334
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>gb|AY096659.1| Arabidopsis thaliana putative AIM1 protein (At4g29010) mRNA,
           complete cds
          Length = 2197

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                       
Query: 297 tttgatatcaatgtcttcacaaaagttcatgagactggagatgtgtcacttatgcctgat 356
           |||||||||||||||||     |||||||| ||||||| ||| | || ||||||||||| 
Sbjct: 196 tttgatatcaatgtctttcagcaagttcataagactggggatttatcgcttatgcctgaa 255

                                              
Query: 357 gtatctgttgagcttgtgtcaaacatgatggaaga 391
           |||||||||||||||||||  ||| ||||||||||
Sbjct: 256 gtatctgttgagcttgtgtgtaacctgatggaaga 290
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>gb|AY072072.1| Arabidopsis thaliana putative AIM1 protein (At4g29010) mRNA,
           complete cds
          Length = 2429

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                       
Query: 297 tttgatatcaatgtcttcacaaaagttcatgagactggagatgtgtcacttatgcctgat 356
           |||||||||||||||||     |||||||| ||||||| ||| | || ||||||||||| 
Sbjct: 240 tttgatatcaatgtctttcagcaagttcataagactggggatttatcgcttatgcctgaa 299

                                              
Query: 357 gtatctgttgagcttgtgtcaaacatgatggaaga 391
           |||||||||||||||||||  ||| ||||||||||
Sbjct: 300 gtatctgttgagcttgtgtgtaacctgatggaaga 334
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>gb|AY059815.1| Arabidopsis thaliana AIM1 protein (At4g29010; F19B15.40) mRNA,
           complete cds
          Length = 2416

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                       
Query: 297 tttgatatcaatgtcttcacaaaagttcatgagactggagatgtgtcacttatgcctgat 356
           |||||||||||||||||     |||||||| ||||||| ||| | || ||||||||||| 
Sbjct: 239 tttgatatcaatgtctttcagcaagttcataagactggggatttatcgcttatgcctgaa 298

                                              
Query: 357 gtatctgttgagcttgtgtcaaacatgatggaaga 391
           |||||||||||||||||||  ||| ||||||||||
Sbjct: 299 gtatctgttgagcttgtgtgtaacctgatggaaga 333
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>dbj|AK221468.1| Arabidopsis thaliana mRNA for AIM1 protein, complete cds, clone:
           RAFL07-34-I05
          Length = 1428

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                       
Query: 297 tttgatatcaatgtcttcacaaaagttcatgagactggagatgtgtcacttatgcctgat 356
           |||||||||||||||||     |||||||| ||||||| ||| | || ||||||||||| 
Sbjct: 237 tttgatatcaatgtctttcagcaagttcataagactggggatttatcgcttatgcctgaa 296

                                              
Query: 357 gtatctgttgagcttgtgtcaaacatgatggaaga 391
           |||||||||||||||||||  ||| ||||||||||
Sbjct: 297 gtatctgttgagcttgtgtgtaacctgatggaaga 331
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>ref|NM_184007.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2184

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                   
Query: 126 atggaggtcggcgcagacggcgtcgcgctcatcaccatctgcaacccgccagtcaa 181
           ||||||||||| || |||||||||||  |||||||||||||||||||||| |||||
Sbjct: 37  atggaggtcggagcggacggcgtcgccgtcatcaccatctgcaacccgcccgtcaa 92
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                        
Query: 126      atggaggtcggcgcagacggcgtcgcgctcatcaccatctgcaacccgccagtcaa 181
                ||||||||||| || |||||||||||  |||||||||||||||||||||| |||||
Sbjct: 13870400 atggaggtcggagcggacggcgtcgccgtcatcaccatctgcaacccgcccgtcaa 13870455
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>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1051E10
          Length = 207782

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                     
Query: 126   atggaggtcggcgcagacggcgtcgcgctcatcaccatctgcaacccgccagtcaa 181
             ||||||||||| || |||||||||||  |||||||||||||||||||||| |||||
Sbjct: 30702 atggaggtcggagcggacggcgtcgccgtcatcaccatctgcaacccgcccgtcaa 30757
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>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0440D10
          Length = 144340

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                      
Query: 126    atggaggtcggcgcagacggcgtcgcgctcatcaccatctgcaacccgccagtcaa 181
              ||||||||||| || |||||||||||  |||||||||||||||||||||| |||||
Sbjct: 107803 atggaggtcggagcggacggcgtcgccgtcatcaccatctgcaacccgcccgtcaa 107858
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>dbj|AK100444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090D07, full
           insert sequence
          Length = 2677

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                   
Query: 126 atggaggtcggcgcagacggcgtcgcgctcatcaccatctgcaacccgccagtcaa 181
           ||||||||||| || |||||||||||  |||||||||||||||||||||| |||||
Sbjct: 253 atggaggtcggagcggacggcgtcgccgtcatcaccatctgcaacccgcccgtcaa 308
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>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70
          Length = 198429

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                           
Query: 345   cttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaag 390
             ||||||||||| |||||||||||||||||||  ||| |||||||||
Sbjct: 29507 cttatgcctgaagtatctgttgagcttgtgtgtaacctgatggaag 29462
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>emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25O24 (ESSA project)
          Length = 97714

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                           
Query: 345   cttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaag 390
             ||||||||||| |||||||||||||||||||  ||| |||||||||
Sbjct: 54538 cttatgcctgaagtatctgttgagcttgtgtgtaacctgatggaag 54493
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>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project)
          Length = 101679

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                           
Query: 345   cttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaag 390
             ||||||||||| |||||||||||||||||||  ||| |||||||||
Sbjct: 13034 cttatgcctgaagtatctgttgagcttgtgtgtaacctgatggaag 12989
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>gb|AF123253.1|AF123253 Arabidopsis thaliana AIM1 protein (AIM1) gene, complete cds
          Length = 7393

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                          
Query: 345  cttatgcctgatgtatctgttgagcttgtgtcaaacatgatggaag 390
            ||||||||||| |||||||||||||||||||  ||| |||||||||
Sbjct: 2843 cttatgcctgaagtatctgttgagcttgtgtgtaacctgatggaag 2888
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>ref|NM_185270.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2151

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 143 cggcgtcgcgctcatcaccatctgcaacccgccagtcaatgc 184
           ||||||||| ||||||||||||| |||||| || ||||||||
Sbjct: 18  cggcgtcgccctcatcaccatctccaaccctcccgtcaatgc 59
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>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05,
             complete sequence
          Length = 145044

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                       
Query: 143   cggcgtcgcgctcatcaccatctgcaacccgccagtcaatgc 184
             ||||||||| ||||||||||||| |||||| || ||||||||
Sbjct: 45135 cggcgtcgccctcatcaccatctccaaccctcccgtcaatgc 45094
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                         
Query: 143     cggcgtcgcgctcatcaccatctgcaacccgccagtcaatgc 184
               ||||||||| ||||||||||||| |||||| || ||||||||
Sbjct: 3167418 cggcgtcgccctcatcaccatctccaaccctcccgtcaatgc 3167377
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>dbj|AK102420.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093D14, full
           insert sequence
          Length = 2757

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 143 cggcgtcgcgctcatcaccatctgcaacccgccagtcaatgc 184
           ||||||||| ||||||||||||| |||||| || ||||||||
Sbjct: 277 cggcgtcgccctcatcaccatctccaaccctcccgtcaatgc 318
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 245     cgacgtcaaggccatcgtgctcactggtgctg 276
               ||||||||||||||||||| |||| |||||||
Sbjct: 1884511 cgacgtcaaggccatcgtgatcaccggtgctg 1884542
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>emb|AL732555.7| Mouse DNA sequence from clone RP23-124I19 on chromosome 4, complete
              sequence
          Length = 157653

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 385    tggaagatggcaaaaagccttc 406
              ||||||||||||||||||||||
Sbjct: 125801 tggaagatggcaaaaagccttc 125822
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 197     catcatccaggggctcaaggagaagtacg 225
               |||| ||| ||||||||||||||||||||
Sbjct: 3230325 catcctccgggggctcaaggagaagtacg 3230297
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 156    atcaccatctgcaacccgccagtcaatgc 184
              |||||||||||||| ||||| ||||||||
Sbjct: 492424 atcaccatctgcaatccgccggtcaatgc 492452
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 363      gttgagcttgtgtcaaacatg 383
                |||||||||||||||||||||
Sbjct: 28204802 gttgagcttgtgtcaaacatg 28204822
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>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0623A10
          Length = 156517

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 363  gttgagcttgtgtcaaacatg 383
            |||||||||||||||||||||
Sbjct: 2831 gttgagcttgtgtcaaacatg 2851
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>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0009H10
          Length = 175754

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 363    gttgagcttgtgtcaaacatg 383
              |||||||||||||||||||||
Sbjct: 135708 gttgagcttgtgtcaaacatg 135728
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>dbj|AK100322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079H12, full
            insert sequence
          Length = 3026

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 363  gttgagcttgtgtcaaacatg 383
            |||||||||||||||||||||
Sbjct: 1812 gttgagcttgtgtcaaacatg 1832
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>emb|CR388225.18| Zebrafish DNA sequence from clone CH211-193C1 in linkage group 14,
              complete sequence
          Length = 153626

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 370    ttgtgtcaaacatgatggaag 390
              |||||||||||||||||||||
Sbjct: 104975 ttgtgtcaaacatgatggaag 104955
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>emb|AL772179.17| Mouse DNA sequence from clone RP23-100B18 on chromosome 2, complete
            sequence
          Length = 194065

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 297  tttgatatcaatgtcttcaca 317
            |||||||||||||||||||||
Sbjct: 4891 tttgatatcaatgtcttcaca 4871
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>gb|AC004606.1|AC004606 Homo sapiens chromosome 17, clone hRPC.1043_H_15, complete sequence
          Length = 99512

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 393   ggcaaaaagccttctgtttct 413
             |||||||||||||||||||||
Sbjct: 53308 ggcaaaaagccttctgtttct 53288
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>dbj|AB071299.1| Oryza sativa OsARF10 mRNA for auxin response factor 10, partial cds
          Length = 2100

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 363  gttgagcttgtgtcaaacatg 383
            |||||||||||||||||||||
Sbjct: 1183 gttgagcttgtgtcaaacatg 1203
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 209     gctcaaggagaagtacgcgg 228
               ||||||||||||||||||||
Sbjct: 1937062 gctcaaggagaagtacgcgg 1937043
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>ref|XM_800078.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053510597.30) partial mRNA
          Length = 3453

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 213  aaggagaagtacgcggaggccatggatc 240
            |||| |||||||||||||||||| ||||
Sbjct: 1423 aaggggaagtacgcggaggccatcgatc 1450
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>emb|AL358075.10| Human DNA sequence from clone RP4-533D7 on chromosome 1p34.1-35.1
             Contains the 3' end of the gene for microtubule associated
             testis specific serine/threonine protein kinase (MAST205),
             the PIK3R3 gene for phosphoinositide-3-kinase regulatory
             subunit polypeptide 3 (p55, gamma), a cytochrome c oxidase
             subunit VIIb (COX7B) pseudogene, two novel genes and a CpG
             island, complete sequence
          Length = 132912

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 263   gctcactggtgctgcggggaaattttgt 290
             |||||||| ||||| |||||||||||||
Sbjct: 51628 gctcactgatgctggggggaaattttgt 51655
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>emb|BX323793.10| Zebrafish DNA sequence from clone DKEY-185P18 in linkage group 16,
              complete sequence
          Length = 170199

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    atgagactggagatgtgtca 344
              ||||||||||||||||||||
Sbjct: 132293 atgagactggagatgtgtca 132274
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 238     atcgcgacgacgtcaaggcc 257
               ||||||||||||||||||||
Sbjct: 2470438 atcgcgacgacgtcaaggcc 2470457
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>ref|XM_695366.1| PREDICTED: Danio rerio hypothetical protein LOC571746 (LOC571746),
           mRNA
          Length = 1395

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 325 atgagactggagatgtgtca 344
           ||||||||||||||||||||
Sbjct: 647 atgagactggagatgtgtca 666
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>gb|AF322013.1|AF322012S2 Bradyrhizobium japonicum symbiotic gene region, part 2 of 2
          Length = 230573

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   cgacgacgtcaaggccatcg 261
             ||||||||||||||||||||
Sbjct: 86834 cgacgacgtcaaggccatcg 86853
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 242     cgacgacgtcaaggccatcg 261
               ||||||||||||||||||||
Sbjct: 2145319 cgacgacgtcaaggccatcg 2145338
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 380    catgatggaagatggcaaaa 399
              ||||||||||||||||||||
Sbjct: 130122 catgatggaagatggcaaaa 130141
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 238     atcgcgacgacgtcaaggcc 257
               ||||||||||||||||||||
Sbjct: 2490745 atcgcgacgacgtcaaggcc 2490764
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>gb|AC005884.1|AC005884 Homo sapiens chromosome 17, clone  hRPK.264_B_14, complete sequence
          Length = 120187

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   ttatgcctgatgtatctgtt 365
             ||||||||||||||||||||
Sbjct: 23252 ttatgcctgatgtatctgtt 23233


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,567,772
Number of Sequences: 3902068
Number of extensions: 3567772
Number of successful extensions: 62474
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62091
Number of HSP's gapped (non-prelim): 378
length of query: 424
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 402
effective length of database: 17,147,199,772
effective search space: 6893174308344
effective search space used: 6893174308344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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