Clone Name | bastl28a09 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_464147.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3121 Score = 234 bits (118), Expect = 2e-58 Identities = 191/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacgatctgtcggaggaggacctggcgctcaagg 288 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 161 ggaagaagaaggacgagaagaaggatgacgatctgtcggaggaggatttggcgctcaagg 220 Query: 289 agcagctcgaactctacgtcgtgcgggcgcaggacgtggatcccggcgtgcagaggctcg 348 |||||||||| |||||||| || ||||||||||||| ||||||||||||||||| ||||| Sbjct: 221 agcagctcgagctctacgtggttcgggcgcaggacgcggatcccggcgtgcagaagctcg 280 Query: 349 ccctcgagagcatgaggcaggaggttcgttcagctacaagctcgatgacgtctgtcccca 408 | || ||||| |||||||||||| ||||||| || |||||||| ||||| ||||| || | Sbjct: 281 cgcttgagagtatgaggcaggagattcgttccgccacaagctcaatgacatctgtaccaa 340 Query: 409 agcctctgaggttcctccgcccac-ctatggaac 441 |||| |||| |||||||| |||| ||||||||| Sbjct: 341 agccactgaaattcctccggccacactatggaac 374 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 128 agccatgtcgccgcccgagaaccccaacg 156 ||||||| ||||||||||||||||||||| Sbjct: 66 agccatggcgccgcccgagaaccccaacg 94
>ref|XM_506717.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_C03.11 mRNA Length = 3169 Score = 234 bits (118), Expect = 2e-58 Identities = 191/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacgatctgtcggaggaggacctggcgctcaagg 288 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 168 ggaagaagaaggacgagaagaaggatgacgatctgtcggaggaggatttggcgctcaagg 227 Query: 289 agcagctcgaactctacgtcgtgcgggcgcaggacgtggatcccggcgtgcagaggctcg 348 |||||||||| |||||||| || ||||||||||||| ||||||||||||||||| ||||| Sbjct: 228 agcagctcgagctctacgtggttcgggcgcaggacgcggatcccggcgtgcagaagctcg 287 Query: 349 ccctcgagagcatgaggcaggaggttcgttcagctacaagctcgatgacgtctgtcccca 408 | || ||||| |||||||||||| ||||||| || |||||||| ||||| ||||| || | Sbjct: 288 cgcttgagagtatgaggcaggagattcgttccgccacaagctcaatgacatctgtaccaa 347 Query: 409 agcctctgaggttcctccgcccac-ctatggaac 441 |||| |||| |||||||| |||| ||||||||| Sbjct: 348 agccactgaaattcctccggccacactatggaac 381 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 128 agccatgtcgccgcccgagaaccccaacg 156 ||||||| ||||||||||||||||||||| Sbjct: 73 agccatggcgccgcccgagaaccccaacg 101
>dbj|AK121963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108C09, full insert sequence Length = 3120 Score = 234 bits (118), Expect = 2e-58 Identities = 191/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacgatctgtcggaggaggacctggcgctcaagg 288 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 160 ggaagaagaaggacgagaagaaggatgacgatctgtcggaggaggatttggcgctcaagg 219 Query: 289 agcagctcgaactctacgtcgtgcgggcgcaggacgtggatcccggcgtgcagaggctcg 348 |||||||||| |||||||| || ||||||||||||| ||||||||||||||||| ||||| Sbjct: 220 agcagctcgagctctacgtggttcgggcgcaggacgcggatcccggcgtgcagaagctcg 279 Query: 349 ccctcgagagcatgaggcaggaggttcgttcagctacaagctcgatgacgtctgtcccca 408 | || ||||| |||||||||||| ||||||| || |||||||| ||||| ||||| || | Sbjct: 280 cgcttgagagtatgaggcaggagattcgttccgccacaagctcaatgacatctgtaccaa 339 Query: 409 agcctctgaggttcctccgcccac-ctatggaac 441 |||| |||| |||||||| |||| ||||||||| Sbjct: 340 agccactgaaattcctccggccacactatggaac 373 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 128 agccatgtcgccgcccgagaaccccaacg 156 ||||||| ||||||||||||||||||||| Sbjct: 65 agccatggcgccgcccgagaaccccaacg 93
>dbj|AK119490.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-D03, full insert sequence Length = 1533 Score = 234 bits (118), Expect = 2e-58 Identities = 191/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacgatctgtcggaggaggacctggcgctcaagg 288 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 221 ggaagaagaaggacgagaagaaggatgacgatctgtcggaggaggatttggcgctcaagg 280 Query: 289 agcagctcgaactctacgtcgtgcgggcgcaggacgtggatcccggcgtgcagaggctcg 348 |||||||||| |||||||| || ||||||||||||| ||||||||||||||||| ||||| Sbjct: 281 agcagctcgagctctacgtggttcgggcgcaggacgcggatcccggcgtgcagaagctcg 340 Query: 349 ccctcgagagcatgaggcaggaggttcgttcagctacaagctcgatgacgtctgtcccca 408 | || ||||| |||||||||||| ||||||| || |||||||| ||||| ||||| || | Sbjct: 341 cgcttgagagtatgaggcaggagattcgttccgccacaagctcaatgacatctgtaccaa 400 Query: 409 agcctctgaggttcctccgcccac-ctatggaac 441 |||| |||| |||||||| |||| ||||||||| Sbjct: 401 agccactgaaattcctccggccacactatggaac 434 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 128 agccatgtcgccgcccgagaaccccaacg 156 ||||||| ||||||||||||||||||||| Sbjct: 126 agccatggcgccgcccgagaaccccaacg 154
>dbj|AK105609.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B03, full insert sequence Length = 3169 Score = 234 bits (118), Expect = 2e-58 Identities = 191/214 (89%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacgatctgtcggaggaggacctggcgctcaagg 288 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 168 ggaagaagaaggacgagaagaaggatgacgatctgtcggaggaggatttggcgctcaagg 227 Query: 289 agcagctcgaactctacgtcgtgcgggcgcaggacgtggatcccggcgtgcagaggctcg 348 |||||||||| |||||||| || ||||||||||||| ||||||||||||||||| ||||| Sbjct: 228 agcagctcgagctctacgtggttcgggcgcaggacgcggatcccggcgtgcagaagctcg 287 Query: 349 ccctcgagagcatgaggcaggaggttcgttcagctacaagctcgatgacgtctgtcccca 408 | || ||||| |||||||||||| ||||||| || |||||||| ||||| ||||| || | Sbjct: 288 cgcttgagagtatgaggcaggagattcgttccgccacaagctcaatgacatctgtaccaa 347 Query: 409 agcctctgaggttcctccgcccac-ctatggaac 441 |||| |||| |||||||| |||| ||||||||| Sbjct: 348 agccactgaaattcctccggccacactatggaac 381 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 128 agccatgtcgccgcccgagaaccccaacg 156 ||||||| ||||||||||||||||||||| Sbjct: 73 agccatggcgccgcccgagaaccccaacg 101
>ref|XM_450542.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3092 Score = 220 bits (111), Expect = 3e-54 Identities = 168/187 (89%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacgatctgtcggaggaggacctggcgctcaagg 288 ||||||||||||| ||||| ||||||||||| |||||||||||||||| ||||||||||| Sbjct: 210 ggaagaagaaggatgagaacaaggacgacgacctgtcggaggaggaccaggcgctcaagg 269 Query: 289 agcagctcgaactctacgtcgtgcgggcgcaggacgtggatcccggcgtgcagaggctcg 348 |||||||||| |||||||| ||||||||||||||| ||||||||||| |||| ||||| Sbjct: 270 agcagctcgagctctacgtggtgcgggcgcaggaccccgatcccggcgtccagaagctcg 329 Query: 349 ccctcgagagcatgaggcaggaggttcgttcagctacaagctcgatgacgtctgtcccca 408 ||||||||||||||||||||||| | ||||| || ||||| || ||||| |||||||| | Sbjct: 330 ccctcgagagcatgaggcaggagatccgttctgcgacaagttcaatgacctctgtcccaa 389 Query: 409 agcctct 415 ||||||| Sbjct: 390 agcctct 396
>dbj|AK071400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092J12, full insert sequence Length = 3091 Score = 220 bits (111), Expect = 3e-54 Identities = 168/187 (89%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacgatctgtcggaggaggacctggcgctcaagg 288 ||||||||||||| ||||| ||||||||||| |||||||||||||||| ||||||||||| Sbjct: 209 ggaagaagaaggatgagaacaaggacgacgacctgtcggaggaggaccaggcgctcaagg 268 Query: 289 agcagctcgaactctacgtcgtgcgggcgcaggacgtggatcccggcgtgcagaggctcg 348 |||||||||| |||||||| ||||||||||||||| ||||||||||| |||| ||||| Sbjct: 269 agcagctcgagctctacgtggtgcgggcgcaggaccccgatcccggcgtccagaagctcg 328 Query: 349 ccctcgagagcatgaggcaggaggttcgttcagctacaagctcgatgacgtctgtcccca 408 ||||||||||||||||||||||| | ||||| || ||||| || ||||| |||||||| | Sbjct: 329 ccctcgagagcatgaggcaggagatccgttctgcgacaagttcaatgacctctgtcccaa 388 Query: 409 agcctct 415 ||||||| Sbjct: 389 agcctct 395
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 141 bits (71), Expect = 2e-30 Identities = 95/103 (92%) Strand = Plus / Plus Query: 263 gtcggaggaggacctggcgctcaaggagcagctcgaactctacgtcgtgcgggcgcagga 322 |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 9567848 gtcggaggaggaccaggcgctcaaggagcagctcgagctctacgtggtgcgggcgcagga 9567907 Query: 323 cgtggatcccggcgtgcagaggctcgccctcgagagcatgagg 365 | ||||||||||| |||| |||||||||||||||||||||| Sbjct: 9567908 ccccgatcccggcgtccagaagctcgccctcgagagcatgagg 9567950 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacga 259 ||||||||||||| ||||| ||||||||||| Sbjct: 9567732 ggaagaagaaggatgagaacaaggacgacga 9567762
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 141 bits (71), Expect = 2e-30 Identities = 95/103 (92%) Strand = Plus / Minus Query: 263 gtcggaggaggacctggcgctcaaggagcagctcgaactctacgtcgtgcgggcgcagga 322 |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 28915268 gtcggaggaggaccaggcgctcaaggagcagctcgagctctacgtggtgcgggcgcagga 28915209 Query: 323 cgtggatcccggcgtgcagaggctcgccctcgagagcatgagg 365 | ||||||||||| |||| |||||||||||||||||||||| Sbjct: 28915208 caccgatcccggcgtccagaagctcgccctcgagagcatgagg 28915166 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 229 ggaagaagaaggacgagaagaaggacgacga 259 ||||||||||||| ||||||||||||||||| Sbjct: 28915388 ggaagaagaaggatgagaagaaggacgacga 28915358
>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468G03 Length = 143918 Score = 141 bits (71), Expect = 2e-30 Identities = 95/103 (92%) Strand = Plus / Minus Query: 263 gtcggaggaggacctggcgctcaaggagcagctcgaactctacgtcgtgcgggcgcagga 322 |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 65312 gtcggaggaggaccaggcgctcaaggagcagctcgagctctacgtggtgcgggcgcagga 65253 Query: 323 cgtggatcccggcgtgcagaggctcgccctcgagagcatgagg 365 | ||||||||||| |||| |||||||||||||||||||||| Sbjct: 65252 caccgatcccggcgtccagaagctcgccctcgagagcatgagg 65210 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 229 ggaagaagaaggacgagaagaaggacgacga 259 ||||||||||||| ||||||||||||||||| Sbjct: 65432 ggaagaagaaggatgagaagaaggacgacga 65402
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 141 bits (71), Expect = 2e-30 Identities = 95/103 (92%) Strand = Plus / Plus Query: 263 gtcggaggaggacctggcgctcaaggagcagctcgaactctacgtcgtgcgggcgcagga 322 |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 7945 gtcggaggaggaccaggcgctcaaggagcagctcgagctctacgtggtgcgggcgcagga 8004 Query: 323 cgtggatcccggcgtgcagaggctcgccctcgagagcatgagg 365 | ||||||||||| |||| |||||||||||||||||||||| Sbjct: 8005 ccccgatcccggcgtccagaagctcgccctcgagagcatgagg 8047 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacga 259 ||||||||||||| ||||| ||||||||||| Sbjct: 7829 ggaagaagaaggatgagaacaaggacgacga 7859
>dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0692F07 Length = 141544 Score = 141 bits (71), Expect = 2e-30 Identities = 95/103 (92%) Strand = Plus / Plus Query: 263 gtcggaggaggacctggcgctcaaggagcagctcgaactctacgtcgtgcgggcgcagga 322 |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 131484 gtcggaggaggaccaggcgctcaaggagcagctcgagctctacgtggtgcgggcgcagga 131543 Query: 323 cgtggatcccggcgtgcagaggctcgccctcgagagcatgagg 365 | ||||||||||| |||| |||||||||||||||||||||| Sbjct: 131544 ccccgatcccggcgtccagaagctcgccctcgagagcatgagg 131586 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacga 259 ||||||||||||| ||||| ||||||||||| Sbjct: 131368 ggaagaagaaggatgagaacaaggacgacga 131398
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 263 gtcggaggaggacctggcgctcaaggagcagctcgaactctacgtcgtgcgggcgcagga 322 |||||||||||| |||||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 2564030 gtcggaggaggatttggcgctcaaggagcagctcgagctctacgtggttcgggcgcagga 2564089 Query: 323 cgtggatcccggcgtgcagaggctcgccctcgagagcatgagg 365 || ||||||||||||||||| |||||| || ||||| |||||| Sbjct: 2564090 cgcggatcccggcgtgcagaagctcgcgcttgagagtatgagg 2564132 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacgatctg 263 ||||||||||||||||||||||||| ||||||||| Sbjct: 2563864 ggaagaagaaggacgagaagaaggatgacgatctg 2563898 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 128 agccatgtcgccgcccgagaaccccaacg 156 ||||||| ||||||||||||||||||||| Sbjct: 2563769 agccatggcgccgcccgagaaccccaacg 2563797
>dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_C03 Length = 103297 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 263 gtcggaggaggacctggcgctcaaggagcagctcgaactctacgtcgtgcgggcgcagga 322 |||||||||||| |||||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 42813 gtcggaggaggatttggcgctcaaggagcagctcgagctctacgtggttcgggcgcagga 42872 Query: 323 cgtggatcccggcgtgcagaggctcgccctcgagagcatgagg 365 || ||||||||||||||||| |||||| || ||||| |||||| Sbjct: 42873 cgcggatcccggcgtgcagaagctcgcgcttgagagtatgagg 42915 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacgatctg 263 ||||||||||||||||||||||||| ||||||||| Sbjct: 42647 ggaagaagaaggacgagaagaaggatgacgatctg 42681 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 128 agccatgtcgccgcccgagaaccccaacg 156 ||||||| ||||||||||||||||||||| Sbjct: 42552 agccatggcgccgcccgagaaccccaacg 42580
>ref|XM_955705.1| Neurospora crassa OR74A hypothetical protein (NCU08931.1) partial mRNA Length = 1479 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1406 agaagaaggacgagaagaaggacga 1430 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1394 agaagaaggacgagaagaaggacga 1418 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1382 agaagaaggacgagaagaaggacga 1406 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1370 agaagaaggacgagaagaaggacga 1394 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1358 agaagaaggacgagaagaaggacga 1382 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1346 agaagaaggacgagaagaaggacga 1370 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1334 agaagaaggacgagaagaaggacga 1358 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1322 agaagaaggacgagaagaaggacga 1346 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1310 agaagaaggacgagaagaaggacga 1334 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1298 agaagaaggacgagaagaaggacga 1322 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1286 agaagaaggacgagaagaaggacga 1310 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1274 agaagaaggacgagaagaaggacga 1298 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1262 agaagaaggacgagaagaaggacga 1286 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1250 agaagaaggacgagaagaaggacga 1274 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggacga 256 ||||||||||||||||||||||| Sbjct: 1240 aagaaggacgagaagaaggacga 1262
>ref|XM_331322.1| Neurospora crassa OR74A hypothetical protein (NCU08931.1) partial mRNA Length = 1479 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1406 agaagaaggacgagaagaaggacga 1430 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1394 agaagaaggacgagaagaaggacga 1418 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1382 agaagaaggacgagaagaaggacga 1406 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1370 agaagaaggacgagaagaaggacga 1394 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1358 agaagaaggacgagaagaaggacga 1382 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1346 agaagaaggacgagaagaaggacga 1370 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1334 agaagaaggacgagaagaaggacga 1358 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1322 agaagaaggacgagaagaaggacga 1346 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1310 agaagaaggacgagaagaaggacga 1334 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1298 agaagaaggacgagaagaaggacga 1322 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1286 agaagaaggacgagaagaaggacga 1310 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1274 agaagaaggacgagaagaaggacga 1298 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1262 agaagaaggacgagaagaaggacga 1286 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1250 agaagaaggacgagaagaaggacga 1274 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggacga 256 ||||||||||||||||||||||| Sbjct: 1240 aagaaggacgagaagaaggacga 1262
>gb|AC163095.6| Mus musculus chromosome 18, clone RP23-208G10, complete sequence Length = 181707 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||||||| ||||||| Sbjct: 170852 aagaggaagaagaaggacgaggagaagga 170824
>ref|XM_734059.1| Plasmodium chabaudi chabaudi ran binding protein 1 (PC301359.00.0) partial mRNA Length = 795 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 446 agaagaaggacgagaagaaggacga 470 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaagga 253 |||||||||||||||||||||| Sbjct: 458 agaagaaggacgagaagaagga 479
>emb|BX294024.1|NC20H10 Neurospora crassa DNA linkage group V Cosmid contig 20H10 Length = 96283 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29333 agaagaaggacgagaagaaggacga 29357 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29321 agaagaaggacgagaagaaggacga 29345 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29309 agaagaaggacgagaagaaggacga 29333 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29297 agaagaaggacgagaagaaggacga 29321 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29285 agaagaaggacgagaagaaggacga 29309 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29273 agaagaaggacgagaagaaggacga 29297 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29261 agaagaaggacgagaagaaggacga 29285 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29249 agaagaaggacgagaagaaggacga 29273 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29237 agaagaaggacgagaagaaggacga 29261 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29225 agaagaaggacgagaagaaggacga 29249 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29213 agaagaaggacgagaagaaggacga 29237 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29201 agaagaaggacgagaagaaggacga 29225 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29189 agaagaaggacgagaagaaggacga 29213 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29177 agaagaaggacgagaagaaggacga 29201 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggacga 256 ||||||||||||||||||||||| Sbjct: 29167 aagaaggacgagaagaaggacga 29189
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaaggacgacga 259 |||| |||||||||||||||||||||||| Sbjct: 69857 aagacgaaggacgagaagaaggacgacga 69885
>gb|AC121263.8| Mus musculus chromosome 18, clone RP24-219I3, complete sequence Length = 169528 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||||||| ||||||| Sbjct: 82187 aagaggaagaagaaggacgaggagaagga 82159
>dbj|AB046415.1| Oryza sativa eIF4A-2 gene for eukaryotic initiation factor 4A, complete cds Length = 6767 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 325 tggatcccggcgtgcagaggctcgccctcgagagcatgagg 365 |||||||||||||||||| |||||| || ||||| |||||| Sbjct: 6487 tggatcccggcgtgcagaagctcgcgcttgagagtatgagg 6527
>ref|XM_656176.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3664.2), mRNA Length = 1551 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaaggacga 256 |||||||||||| |||||||||||||| Sbjct: 1203 gaagaagaaggaagagaagaaggacga 1229 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||| ||||||||| Sbjct: 1217 agaagaaggacgagaggaaggacga 1241
>gb|AC024838.1| Caenorhabditis elegans cosmid Y59E9AL, complete sequence Length = 24330 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 234 aagaaggacgagaagaaggacgacgat 260 ||||||||||| ||||||||||||||| Sbjct: 18420 aagaaggacgaaaagaaggacgacgat 18394 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 aagaaggacgagaagaaggacgac 257 ||||||||||| |||||||||||| Sbjct: 14799 aagaaggacgacaagaaggacgac 14776
>emb|Z81048.1|CEC41G7 Caenorhabditis elegans Cosmid C41G7, complete sequence Length = 29021 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 234 aagaaggacgagaagaaggacga 256 ||||||||||||||||||||||| Sbjct: 18106 aagaaggacgagaagaaggacga 18084 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 aagaaggacgagaagaaggacgac 257 ||||||||||| |||||||||||| Sbjct: 18040 aagaaggacgacaagaaggacgac 18017
>emb|AL035443.4|HS137H15 Human DNA sequence from clone RP1-137H15 on chromosome Xq26.2-27.2 Contains a novel gene, the ZIC3 gene for Zic family member 3 heterotaxy (odd-paired homolog, Drosophila) and four CpG islands, complete sequence Length = 109339 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaag 251 ||||||||||||||||| ||||||||| Sbjct: 99287 aagaggaagaagaaggaggagaagaag 99261
>ref|NM_068344.2| Caenorhabditis elegans Y59E9AL.6 (Y59E9AL.6) mRNA, complete cds Length = 695 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggacgacgat 260 ||||||||||| ||||||||||||||| Sbjct: 378 aagaaggacgaaaagaaggacgacgat 404
>ref|NM_060130.2| Caenorhabditis elegans C41G7.6 (C41G7.6) mRNA, complete cds Length = 768 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggacga 256 ||||||||||||||||||||||| Sbjct: 313 aagaaggacgagaagaaggacga 335 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggacgac 257 ||||||||||| |||||||||||| Sbjct: 379 aagaaggacgacaagaaggacgac 402
>ref|XM_324199.1| Neurospora crassa OR74A predicted protein (NCU04843.1) partial mRNA Length = 972 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaagga 253 |||||||||||||||||||||| Sbjct: 425 agaagaaggacgagaagaagga 446
>ref|XM_955309.1| Neurospora crassa OR74A hypothetical protein (NCU04843.1) partial mRNA Length = 972 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaagga 253 |||||||||||||||||||||| Sbjct: 425 agaagaaggacgagaagaagga 446
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 agaaggacgagaagaaggacga 256 |||||||||||||||||||||| Sbjct: 73068 agaaggacgagaagaaggacga 73089
>ref|XM_774922.1| PREDICTED: Strongylocentrotus purpuratus similar to 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein homolog), transcript variant 1 (LOC575334), mRNA Length = 1057 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaagga 253 |||||||||||||||||||||| Sbjct: 942 agaagaaggacgagaagaagga 963 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaaggacga 256 ||||||||||| |||||||||||||| Sbjct: 929 aagaagaaggaggagaagaaggacga 954
>ref|XM_796612.1| PREDICTED: Strongylocentrotus purpuratus similar to 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein homolog), transcript variant 2 (LOC575334), mRNA Length = 1027 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaagga 253 |||||||||||||||||||||| Sbjct: 912 agaagaaggacgagaagaagga 933 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaaggacga 256 ||||||||||| |||||||||||||| Sbjct: 899 aagaagaaggaggagaagaaggacga 924
>emb|AL132909.1|ATT14K23 Arabidopsis thaliana DNA chromosome 3, BAC clone T14K23 Length = 101786 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 226 agaggaagaagaaggacgagaagaag 251 |||||||||||||||| ||||||||| Sbjct: 72669 agaggaagaagaaggatgagaagaag 72644
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 agaaggacgagaagaaggacga 256 |||||||||||||||||||||| Sbjct: 73440 agaaggacgagaagaaggacga 73461
>gb|AC156949.9| Mus musculus 10 BAC RP24-347J14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 149183 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 227 gaggaagaagaaggacgagaagaagg 252 ||||||||||||||| |||||||||| Sbjct: 124334 gaggaagaagaaggaggagaagaagg 124359
>gb|AY122623.1| Diplonema papillatum strain ATCC 50162 heat shock protein 90 (HSP-90) gene, partial cds Length = 1948 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggacgacga 259 |||||||||||||||||||| ||||| Sbjct: 605 aagaaggacgagaagaaggaagacga 630
>emb|BX323086.4| Zebrafish DNA sequence from clone DKEY-170I11 in linkage group 20, complete sequence Length = 183026 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 aggaagaagaaggacgagaagaagga 253 ||||||||||||||| |||||||||| Sbjct: 135502 aggaagaagaaggacaagaagaagga 135477
>emb|CR854846.8| Zebrafish DNA sequence from clone DKEY-228N9 in linkage group 11, complete sequence Length = 202364 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 aggaagaagaaggacgagaagaagga 253 ||||||||||||||| |||||||||| Sbjct: 173303 aggaagaagaaggacaagaagaagga 173278
>gb|AC153979.3| Mus musculus 10 BAC RP24-502B23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173683 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 227 gaggaagaagaaggacgagaagaagg 252 ||||||||||||||| |||||||||| Sbjct: 408 gaggaagaagaaggaggagaagaagg 433
>ref|NM_102584.2| Arabidopsis thaliana unknown protein AT1G28190 mRNA, complete cds Length = 1040 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 623 aagaggaagaagaaggaggaggagaagga 651
>ref|NM_127618.2| Arabidopsis thaliana unknown protein AT2G20580 mRNA, complete cds Length = 3043 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaaggacgacgatctgtcggaggaggac 275 ||||||||||||||||| ||||| || ||| |||| || |||||| Sbjct: 286 aagaagaaggacgagaaaaaggatgaggatttgtctgaagaggac 330
>gb|AC121832.3| Mus musculus chromosome 10 clone RP24-67D23, complete sequence Length = 172348 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||| ||||||||| ||||||||||| Sbjct: 64650 aagaggaggaagaaggaagagaagaagga 64622
>gb|AC161534.5| Mus musculus chromosome 1, clone RP24-127D13, complete sequence Length = 137652 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 63428 aagaggaagaagaaggaagaggagaagga 63456
>gb|AC125255.15| Mus musculus chromosome 5, clone RP24-332C17, complete sequence Length = 173258 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 gaggaagaagaaggacgagaagaag 251 ||||||||||||||| ||||||||| Sbjct: 156623 gaggaagaagaaggaggagaagaag 156599
>gb|AY550907.1| Mus musculus embryonic stem cell-related protein mRNA, complete cds Length = 1616 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 608 aagaggaagaagaaggaggaggagaagga 636
>ref|XM_960457.1| Neurospora crassa OR74A hypothetical protein (NCU01919.1) partial mRNA Length = 1647 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaag 251 ||||||||||||||||||||| Sbjct: 1198 aagaagaaggacgagaagaag 1218
>gb|AY230828.1| Arabidopsis thaliana 26S proteasome subunit RPN1a (RPN1a) mRNA, complete cds Length = 2891 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaaggacgacgatctgtcggaggaggac 275 ||||||||||||||||| ||||| || ||| |||| || |||||| Sbjct: 169 aagaagaaggacgagaaaaaggatgaggatttgtctgaagaggac 213
>gb|AC110816.7| Mus musculus BAC clone RP23-20P15 from chromosome 12, complete sequence Length = 216095 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaagga 253 ||||||||||||| ||||||||||| Sbjct: 47413 ggaagaagaaggaggagaagaagga 47437
>gb|AC140247.3| Mus musculus BAC clone RP23-469I15 from chromosome 9, complete sequence Length = 189336 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 114882 aagaggaagaagaaggaggaggagaagga 114910
>gb|AC116595.4| Mus musculus BAC clone RP24-127G9 from chromosome 18, complete sequence Length = 158788 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 99139 aagaggaagaagaaggaggaggagaagga 99111
>ref|XM_956737.1| Neurospora crassa OR74A hypothetical protein (NCU05265.1) partial mRNA Length = 2910 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 ggcgtgcagaggctcgccctcgaga 357 |||| |||||||||||||||||||| Sbjct: 1671 ggcgagcagaggctcgccctcgaga 1647
>ref|XM_324621.1| Neurospora crassa OR74A hypothetical protein (NCU05265.1) partial mRNA Length = 2910 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 ggcgtgcagaggctcgccctcgaga 357 |||| |||||||||||||||||||| Sbjct: 1671 ggcgagcagaggctcgccctcgaga 1647
>ref|XM_329108.1| Neurospora crassa OR74A hypothetical protein (NCU01919.1) partial mRNA Length = 1647 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaag 251 ||||||||||||||||||||| Sbjct: 1198 aagaagaaggacgagaagaag 1218
>ref|NM_026560.2| Mus musculus cell division cycle associated 8 (Cdca8), mRNA Length = 1616 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 608 aagaggaagaagaaggaggaggagaagga 636
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gaggaagaagaaggacgagaa 247 ||||||||||||||||||||| Sbjct: 3656789 gaggaagaagaaggacgagaa 3656809 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gaggaagaagaaggacgagaa 247 ||||||||||||||||||||| Sbjct: 2310882 gaggaagaagaaggacgagaa 2310902 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 gaggaagaagaaggacgagaa 247 ||||||||||||||||||||| Sbjct: 376418 gaggaagaagaaggacgagaa 376398
>gb|AC122283.3| Mus musculus BAC clone RP23-242G6 from chromosome 10, complete sequence Length = 184346 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||| ||||||| ||||||||||| Sbjct: 166234 aagaggaaggagaaggaggagaagaagga 166262
>gb|AC121151.11| Mus musculus chromosome 17, clone RP24-342C2, complete sequence Length = 205467 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaagga 253 ||||||||||||| ||||||||||| Sbjct: 116794 ggaagaagaaggaggagaagaagga 116818
>gb|AC119894.5| Mus musculus chromosome 10, clone RP24-225G11, complete sequence Length = 227319 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||| ||||||||| ||||||||||| Sbjct: 126 aagaggaggaagaaggaagagaagaagga 98
>gb|AC141882.3| Mus musculus BAC clone RP24-177O3 from chromosome 17, complete sequence Length = 173120 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||||||| Sbjct: 94198 aagaggaagaagaaggagaagaagaagga 94170
>gb|AC122418.4| Mus musculus BAC clone RP24-159E6 from chromosome 13, complete sequence Length = 221980 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 74347 aagaggaagaagaaggaggaggagaagga 74375
>gb|AC092424.4| Homo sapiens BAC clone RP13-572K6 from 7, complete sequence Length = 82435 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||||||| Sbjct: 44268 aagaggaagaagaaggagaagaagaagga 44296
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 |||||||||||||||| |||||||| Sbjct: 74198 agaagaaggacgagaaaaaggacga 74222
>gb|AC140265.2| Mus musculus BAC clone RP23-318B18 from chromosome 6, complete sequence Length = 178580 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||||||| Sbjct: 7715 aagaggaagaagaaggagaagaagaagga 7687
>ref|XM_569003.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNB01270) partial mRNA Length = 2730 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||| | ||||||||||| Sbjct: 1325 aagaggaagaagaagaaggagaagaagga 1353
>gb|AC021044.5| Arabidopsis thaliana chromosome I BAC F3H9 genomic sequence, complete sequence Length = 121720 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 97767 aagaggaagaagaaggaggaggagaagga 97795
>gb|AC122056.4| Mus musculus BAC clone RP24-466A3 from chromosome 14, complete sequence Length = 179685 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 3086 aagaagaagaagaaggaggagaagaagga 3114
>gb|AC124713.5| Mus musculus BAC clone RP24-116N2 from chromosome 8, complete sequence Length = 184855 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||| |||| Sbjct: 52449 aagaggaagaagaaggaggagaaggagga 52421
>gb|AC091092.3| Papio anubis clone RP41-191D8, complete sequence Length = 167732 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||| ||||| ||||||||||||| Sbjct: 27507 aagaggaaggagaagaacgagaagaagga 27479
>gb|AC121797.3| Mus musculus BAC clone RP23-424C23 from chromosome 3, complete sequence Length = 177109 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 55797 aagaggaagaagaaggaggaggagaagga 55769
>gb|AC114918.4| Mus musculus BAC clone RP23-86N20 from 5, complete sequence Length = 165767 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 |||||| |||||||||| ||||||||||| Sbjct: 101903 aagaggcagaagaaggaggagaagaagga 101931
>gb|AC121903.2| Mus musculus BAC clone RP24-174G24 from 18, complete sequence Length = 172114 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 9461 aagaggaagaagaaggaggaggagaagga 9433
>ref|XM_724171.1| Plasmodium yoelii yoelii str. 17XNL ATP-dependent RNA helicase (PY01492) partial mRNA Length = 2604 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||| | ||||||||||| Sbjct: 140 aagaggaagaagaagaaggagaagaagga 168
>gb|AC093693.4| Homo sapiens BAC clone RP11-761E14 from 7, complete sequence Length = 47886 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||| |||| Sbjct: 1954 aagaggaagaagaaggaggagaaggagga 1982
>gb|AC104688.2| Homo sapiens BAC clone RP11-123O1 from 7, complete sequence Length = 47088 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||| |||| Sbjct: 47042 aagaggaagaagaaggaggagaaggagga 47070
>emb|BX664730.2| Human DNA sequence from clone RP11-118H15 on chromosome 9 Contains a novel gene, complete sequence Length = 171251 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 gaggaagaagaaggacgagaagaag 251 ||||||||||||||| ||||||||| Sbjct: 470 gaggaagaagaaggaggagaagaag 446
>emb|AL772284.5| Human DNA sequence from clone RP13-347D8 on chromosome X Contains a pseudogene similar to part of KIAA0633 protein (COBL), the RNF127 gene for ring finger protein 127 (FLJ40322, FLJ34458, FLJ22612), gene KIAA1210 and three CpG islands, complete sequence Length = 186148 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||| | ||||||||||| Sbjct: 7115 aagaggaagaagaagaaggagaagaagga 7143
>emb|AL606500.8| Human DNA sequence from clone RP11-274N19 on chromosome 1 Contains the 3' end of the KCNN3 gene for potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, a novel gene and the 5' end of the ADAR gene for adenosine deaminase, RNA-specific, complete sequence Length = 173014 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 gaggaagaagaaggacgagaagaag 251 ||||||||||||||| ||||||||| Sbjct: 169503 gaggaagaagaaggaggagaagaag 169527 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 gaggaagaagaaggacgagaagaag 251 ||||||||||||||| ||||||||| Sbjct: 169252 gaggaagaagaaggaggagaagaag 169276
>emb|AL158214.33| Human DNA sequence from clone RP11-543E8 on chromosome 1q42.2-43 Contains a novel gene, a ribosomal protein S24 (RPS24) pseudogene, the COG2 gene for component of oligomeric golgi complex 2, the 3' end of the AGT gene for angiotensinogen (serine (or cysteine) proteinase inhibitor,clade A (alpha-1 antiproteinase, antitrypsin), member 8) and a CpG island, complete sequence Length = 181175 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||||||| Sbjct: 55466 aagaggaagaagaaggagaagaagaagga 55438
>emb|AL121991.50|HSDJ675E8 Human DNA sequence from clone RP4-675E8 on chromosome 1p34.1-35.3 Contains the 3' end of EIF3S2 gene for eukaryotic translation initiation factor 3, subunit 2 beta, the LCK gene for lymphocyte-specific protein tyrosine kinase, a novel gene, a novel gene (MGC10820) and two CpG islands, complete sequence Length = 61515 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 41412 aagaggaagaagaaggaggaggagaagga 41384
>emb|BX053478.1|CNS09DFE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC31AF05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 912 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 agaaggacgagaagaaggacgacga 259 ||||||| ||||||||||||||||| Sbjct: 756 agaaggaggagaagaaggacgacga 732
>emb|BX015293.1|CNS08JYP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23AA05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 943 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 agaaggacgagaagaaggacgacga 259 ||||||| ||||||||||||||||| Sbjct: 877 agaaggaggagaagaaggacgacga 901
>emb|BX009540.1|CNS08FIW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA15BG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 938 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 agaaggacgagaagaaggacgacga 259 ||||||| ||||||||||||||||| Sbjct: 382 agaaggaggagaagaaggacgacga 358
>gb|AY040061.1| Arabidopsis thaliana putative 26S proteasome regulatory subunit S2 (At2g20580) mRNA, complete cds Length = 2676 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaaggacgacgatctgtcggaggaggac 275 ||||||||||||||||| ||||| || ||| |||| || |||||| Sbjct: 85 aagaagaaggacgagaaaaaggatgaggatttgtctgaagaggac 129
>gb|AF360216.1| Arabidopsis thaliana putative 26S proteasome regulatory subunit S2 (At2g20580) mRNA, complete cds Length = 3041 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaaggacgacgatctgtcggaggaggac 275 ||||||||||||||||| ||||| || ||| |||| || |||||| Sbjct: 286 aagaagaaggacgagaaaaaggatgaggatttgtctgaagaggac 330
>gb|AC158365.2| Mus musculus BAC clone RP23-182N12 from chromosome 12, complete sequence Length = 220129 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 |||| ||||||||||||||||||| |||| Sbjct: 83973 aagaagaagaagaaggacgagaaggagga 83945
>emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 267509 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 9015 aagaagaagaagaaggaggagaagaagga 8987 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 8982 aagaagaagaagaaggaggagaagaagga 8954
>emb|AL590445.1|CNS07EGC chromosome V of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 211018 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 208845 aagaagaagaagaaggaggagaagaagga 208873 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 208812 aagaagaagaagaaggaggagaagaagga 208840
>gb|AC164311.4| Mus musculus BAC clone RP23-144H18 from chromosome 8, complete sequence Length = 190693 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||| |||| Sbjct: 142989 aagaggaagaagaaggaggagaaggagga 142961
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||| | ||||||||||| Sbjct: 387412 aagaggaagaagaagaaggagaagaagga 387440
>gb|AC105299.44| Mus musculus strain C57BL/6J clone rp23-27h12 map 17, complete sequence Length = 221749 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 |||||||||| |||||||||||||| Sbjct: 166306 agaagaaggaggagaagaaggacga 166330
>gb|AC114777.4| Homo sapiens BAC clone RP11-496D24 from 4, complete sequence Length = 52417 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 gaggaagaagaaggacgagaagaag 251 ||||||||||||||| ||||||||| Sbjct: 42992 gaggaagaagaaggaagagaagaag 43016
>gb|AC108048.6| Homo sapiens BAC clone RP11-323K3 from 4, complete sequence Length = 220568 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaaga 249 ||||||||||||||||| ||||||| Sbjct: 168054 aagaggaagaagaaggaggagaaga 168030
>dbj|AB077114.1| Prunus persica mRNA, microsatellite marker M11c Length = 535 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 |||| ||||||||||||| |||||||||| Sbjct: 207 aagaagaagaagaaggacaagaagaagga 235
>gb|AC104445.2| Homo sapiens chromosome 3 clone RP11-444P10, complete sequence Length = 201218 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||| |||| Sbjct: 118668 aagaggaagaagaaggatgagaaggagga 118640
>gb|AC095048.3| Homo sapiens BAC clone RP11-239A9 from 4, complete sequence Length = 123661 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||| |||| Sbjct: 65988 aagaggaagaagaaggaggagaaggagga 66016
>gb|AC064805.13| Homo sapiens chromosome 17, clone CTD-2006K23, complete sequence Length = 87833 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 gaggaagaagaaggacgagaagaag 251 ||||||||||||||||||| ||||| Sbjct: 38705 gaggaagaagaaggacgaggagaag 38729
>ref|XM_691923.1| PREDICTED: Danio rerio similar to Cep164 protein (LOC568587), mRNA Length = 519 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 334 aagaagaagaagaaggaggagaagaagga 362
>gb|AC096777.1| Mus musculus clone RP23-106L19, complete sequence Length = 209671 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||||||| Sbjct: 44767 aagaggaagaagaaggagaagaagaagga 44739
>gb|AC124915.5| Homo sapiens chromosome 3 clone RP11-717N7, complete sequence Length = 183748 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||| |||| Sbjct: 24541 aagaggaagaagaaggatgagaaggagga 24513
>gb|AC133897.15| Mus musculus chromosome 5, clone RP24-357G2, complete sequence Length = 177013 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||| |||| Sbjct: 34872 aagaggaagaagaaggaagagaaggagga 34844
>gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-activated potassium channel (KCNN3) gene, complete cds Length = 163217 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 gaggaagaagaaggacgagaagaag 251 ||||||||||||||| ||||||||| Sbjct: 115228 gaggaagaagaaggaggagaagaag 115204 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 gaggaagaagaaggacgagaagaag 251 ||||||||||||||| ||||||||| Sbjct: 114862 gaggaagaagaaggaggagaagaag 114838 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 gaggaagaagaaggacgagaagaag 251 ||||||||||||||| ||||||||| Sbjct: 114611 gaggaagaagaaggaggagaagaag 114587
>dbj|AK076422.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4831429J16 product:hypothetical protein, full insert sequence Length = 1603 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 608 aagaggaagaagaaggaggaggagaagga 636
>gb|AC154014.4| Mus musculus 6 BAC RP24-409C18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 161963 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||| ||||||| ||||||||||| Sbjct: 147122 aagaggaaggagaaggaggagaagaagga 147094
>gb|AC004806.2| Homo sapiens 12 BAC RP11-360E11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131027 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||| |||| Sbjct: 76251 aagaggaagaagaaggaggagaaggagga 76279
>gb|AC154017.7| Mus musculus 6 BAC RP24-156H18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 193116 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||| ||||||| ||||||||||| Sbjct: 126236 aagaggaaggagaaggaggagaagaagga 126264
>gb|AC019102.13| Homo sapiens BAC clone RP11-457A20 from 2, complete sequence Length = 158242 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||||||| Sbjct: 80349 aagaggaagaagaaggagaagaagaagga 80321
>gb|AC139724.1| Homo sapiens BAC clone RP11-1H20 from 4, complete sequence Length = 155873 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||| |||| Sbjct: 126426 aagaggaagaagaaggaggagaaggagga 126454
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggac 254 ||||||||||||||||||||| Sbjct: 1569800 aagaaggacgagaagaaggac 1569820
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 aagaagaaggacgagaagaaggacg 255 ||||||||||||| ||||||||||| Sbjct: 2532680 aagaagaaggacgggaagaaggacg 2532656
>dbj|BS000193.1| Pan troglodytes chromosome 22 clone:PTB-117K17, map 22, partial sequences, complete sequence Length = 124920 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||| |||| Sbjct: 86936 aagaggaagaagaaggaggagaaggagga 86908
>gb|AC114558.18| Mus musculus chromosome 8, clone RP23-47G19, complete sequence Length = 262311 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaaga 249 ||||||||||||||||| ||||||| Sbjct: 92618 aagaggaagaagaaggaggagaaga 92642
>dbj|AK118888.1| Arabidopsis thaliana At1g28190 mRNA for unknown protein, complete cds, clone: RAFL21-22-F21 Length = 1038 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 623 aagaggaagaagaaggaggaggagaagga 651
>emb|AL929149.8| Mouse DNA sequence from clone RP23-93B24 on chromosome 2, complete sequence Length = 153962 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| || |||||||| Sbjct: 58398 aagaggaagaagaaggaggaaaagaagga 58426
>gb|AC005386.1|AC005386 citb_57_l_21, complete sequence Length = 196361 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||||||| Sbjct: 148514 aagaggaagaagaaggagaagaagaagga 148486
>gb|AC117205.3| Mus musculus BAC clone RP23-257K20 from 10, complete sequence Length = 177430 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 gccctcgagagcatgaggcaggagg 372 ||||||||||| ||||||||||||| Sbjct: 118247 gccctcgagagaatgaggcaggagg 118271
>gb|AC099692.4| Mus musculus chromosome 13, clone RP23-198N22, complete sequence Length = 216362 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 134991 aagaggaagaagaaggaggaggagaagga 135019
>dbj|AB081564.1| Paralichthys olivaceus TCRJd-Cd2-S gene for T cell receptor delta chain (J-C region), partial cds Length = 3764 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 3190 aagaagaagaagaaggaggagaagaagga 3162
>dbj|AB081563.1| Paralichthys olivaceus TCRJd-Cd2-L gene for T cell receptor delta chain (J-C region), partial cds Length = 3980 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 3507 aagaagaagaagaaggaggagaagaagga 3479 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 3429 aagaagaagaagaaggaggagaagaagga 3401
>dbj|AB081562.1| Paralichthys olivaceus TCRJd-Cd1 gene for T cell receptor delta chain (J-C region), partial cds Length = 4892 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 4539 aagaagaagaagaaggaggagaagaagga 4511
>gb|AC078897.20| Mus musculus strain C57BL/6J chromosome 3 clone rp23-105k2, complete sequence Length = 200088 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||| | ||||||||||| Sbjct: 37640 aagaggaagaagaagaaggagaagaagga 37612
>gb|AC100386.29| Mus musculus chromosome 10, clone RP23-132J19, complete sequence Length = 216928 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 64589 aagaggaagaagaaggaggaggagaagga 64617
>gb|AC132383.5| Mus musculus BAC clone RP23-434M19 from 10, complete sequence Length = 212242 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||| ||||||| ||||||||||| Sbjct: 6714 aagaggaaggagaaggaggagaagaagga 6742
>gb|AC168209.7| Mus musculus chromosome 5, clone RP24-392C11, complete sequence Length = 140911 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaaga 249 ||||||||||||||||| ||||||| Sbjct: 45771 aagaggaagaagaaggaggagaaga 45747
>gb|AC159189.2| Mus musculus BAC clone RP24-159L17 from chromosome 6, complete sequence Length = 160884 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagga 253 ||||||||||||||||| |||||||||| Sbjct: 148150 aagaggaagaagaaggagaagaagaagga 148122
>gb|AC152891.2| Pan troglodytes chromosome X clone RP43-038O03 map human ortholog Xq23, complete sequence Length = 197819 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 226 agaggaagaagaaggacgagaagaagga 253 |||||||| ||||||| ||||||||||| Sbjct: 14473 agaggaaggagaaggaggagaagaagga 14500
>gb|AC167012.3| Mus musculus BAC clone RP23-416A5 from chromosome 13, complete sequence Length = 193916 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 16893 gaagaagaaggaggagaagaagga 16916
>gb|AC164549.4| Mus musculus BAC clone RP24-273K1 from chromosome 16, complete sequence Length = 182658 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 10892 gaagaagaaggaggagaagaagga 10869
>gb|AC160992.2| Mus musculus BAC clone RP23-147I23 from chromosome 9, complete sequence Length = 215980 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 95453 gaagaagaaggaggagaagaagga 95476
>ref|NM_197514.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0053C23.18), mRNA Length = 540 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacg 255 |||||||||| ||||||||||||| Sbjct: 224 agaagaaggaggagaagaaggacg 247
>ref|NM_183840.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 336 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 gaggaagaagaaggacgaga 246 |||||||||||||||||||| Sbjct: 231 gaggaagaagaaggacgaga 250
>gb|AY713945.1| Gasterosteus aculeatus MHC class II antigen gene cluster, complete sequence Length = 99318 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacga 244 |||||||||||||||||||| Sbjct: 95536 aagaggaagaagaaggacga 95517
>gb|AF491966.1| Pegoscapus hoffmeyeri A microsatellite Pe3 sequence Length = 584 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 58 gaagaagaaggatgagaagaagga 81
>gb|AC119986.7| Mus musculus chromosome 14, clone RP24-502B4, complete sequence Length = 170418 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaaggac 254 |||||||||||| ||||||||||| Sbjct: 140619 aagaagaaggacaagaagaaggac 140642
>gb|AY660960.1| Vaccinium corymbosum dehydrin COR11 (bbdhn7) mRNA, complete cds Length = 549 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaaggacga 256 |||| ||||||||||||| |||||||| |||| Sbjct: 253 aagaagaagaagaaggacaagaagaagcacga 284
>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence Length = 130146 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 aggacgagaagaaggacgac 257 |||||||||||||||||||| Sbjct: 82557 aggacgagaagaaggacgac 82576
>gb|AC118206.11| Mus musculus chromosome 3, clone RP24-159J16, complete sequence Length = 255036 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaag 248 ||||||||||||||||| |||||| Sbjct: 57026 aagaggaagaagaaggaggagaag 57003
>gb|AC131039.7| Mus musculus chromosome 1, clone RP23-274I23, complete sequence Length = 187304 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 aggaagaagaaggacgagaagaag 251 |||||||||||||| ||||||||| Sbjct: 15489 aggaagaagaaggaggagaagaag 15466
>gb|AC140298.3| Mus musculus BAC clone RP24-319I6 from chromosome 18, complete sequence Length = 148703 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 gaggaagaagaaggacgagaagaa 250 ||||||||||||||| |||||||| Sbjct: 4335 gaggaagaagaaggaggagaagaa 4312
>gb|AC122442.4| Mus musculus BAC clone RP24-230D14 from chromosome 19, complete sequence Length = 180516 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 agaggaagaagaaggacgagaaga 249 |||||||||||||||| ||||||| Sbjct: 32107 agaggaagaagaaggaggagaaga 32130
>gb|AC131705.4| Mus musculus BAC clone RP24-130N16 from chromosome 18, complete sequence Length = 122446 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 gaggaagaagaaggacgagaagaa 250 ||||||||||||||| |||||||| Sbjct: 114844 gaggaagaagaaggaggagaagaa 114821
>gb|AC125400.4| Mus musculus BAC clone RP24-380E10 from chromosome 10, complete sequence Length = 154681 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 84322 gaagaagaaggaggagaagaagga 84345 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 84153 gaagaagaaggaggagaagaagga 84176
>gb|AC122929.4| Mus musculus BAC clone RP23-12A18 from chromosome 6, complete sequence Length = 252503 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 172742 gaagaagaaggaggagaagaagga 172765
>gb|AC125185.3| Mus musculus BAC clone RP23-301L11 from chromosome 19, complete sequence Length = 168526 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 226 agaggaagaagaaggacgagaagaagga 253 ||||| |||||||||| ||||||||||| Sbjct: 88404 agagggagaagaaggaggagaagaagga 88377
>gb|AC124178.3| Mus musculus BAC clone RP23-193J15 from 18, complete sequence Length = 206833 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaag 248 ||||||||||||||||| |||||| Sbjct: 172182 aagaggaagaagaaggaggagaag 172159
>gb|AC126457.3| Mus musculus BAC clone RP23-68E6 from 16, complete sequence Length = 147585 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 83403 gaagaagaaggaggagaagaagga 83380
>gb|AC115751.6| Mus musculus chromosome 1, clone RP23-16I21, complete sequence Length = 256998 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 aggaagaagaaggacgagaagaag 251 |||||||||||||| ||||||||| Sbjct: 72763 aggaagaagaaggaggagaagaag 72786
>gb|DQ249181.1| Homo sapiens isolate 541CLS37 haplotype HLA-B070201/HLA-Cw07020103 genomic sequence Length = 341361 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 60045 agagcctgaggcaggaggttccttcagc 60072
>gb|DQ249177.1| Homo sapiens isolate 218CLS60 haplotype HLA-B15010101/HLA-Cw030401 genomic sequence Length = 351341 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 76133 agagcctgaggcaggaggttccttcagc 76160
>gb|DQ249176.1| Homo sapiens isolate 218CLS51 haplotype HLA-B140201/HLA-Cw0802 genomic sequence Length = 363675 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 75782 agagcctgaggcaggaggttccttcagc 75809
>gb|DQ249174.1| Homo sapiens isolate 144CLS49 haplotype HLA-B080101/HLA-Cw070101 genomic sequence Length = 338544 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 72249 agagcctgaggcaggaggttccttcagc 72276
>gb|DQ249173.1| Homo sapiens isolate 135CLS51 haplotype HLA-B140201/HLA-Cw0802 genomic sequence Length = 336776 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 54884 agagcctgaggcaggaggttccttcagc 54911
>gb|DQ249172.1| Homo sapiens isolate 135CLS49 haplotype HLA-B080101/HLA-Cw070101 genomic sequence Length = 342745 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 52857 agagcctgaggcaggaggttccttcagc 52884
>gb|AC147635.4| Mus musculus BAC clone RP23-290C4 from chromosome 3, complete sequence Length = 213637 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaagg 252 ||||||||||||||||| ||| |||||| Sbjct: 49509 aagaggaagaagaaggaggaggagaagg 49482
>gb|U50312.2| Caenorhabditis elegans cosmid B0222, complete sequence Length = 40535 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cggagatcctccagaaaata 30 |||||||||||||||||||| Sbjct: 21694 cggagatcctccagaaaata 21675
>gb|AC121125.9| Mus musculus chromosome 5, clone RP23-10F17, complete sequence Length = 264205 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 226 agaggaagaagaaggacgagaagaagga 253 |||||||||||||||| ||| ||||||| Sbjct: 113466 agaggaagaagaaggaggaggagaagga 113493
>gb|AF368526.4| Lyngbya majuscula CCAP 1446/4 HypB (hypB), HypA (hypA), HypE (hypE), hypothetical protein, 4-oxalocrotonate tautomerase, HypD (hypD), hypothetical protein, HypC (hypC), HypF (hypF), hypothetical proteins, and HupS (hupS) genes, complete cds; hupS-hupL intergenic spacer, complete sequence; HupL (hupL), hypothetical protein, and HupW (hupW) genes, complete cds; and hypothetical protein gene, partial cds Length = 21201 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggacgac 257 ||||||||||| |||||||||||| Sbjct: 8546 aagaaggacgacaagaaggacgac 8569
>ref|NG_002397.2| Homo sapiens major histocompatibility complex, class I, BC (HLA-BC) on chromosome 6 Length = 89417 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 47994 agagcctgaggcaggaggttccttcagc 47967
>emb|Z82215.1|HS68O2 Human DNA sequence from clone RP1-68O2 on chromosome 22 Contains the 5' end of the APOL2 gene for apolipoprotein L 2, the APOL gene for apolipoprotein L, the MYH9 gene for nonmuscle type myosin heavy chain 9. ESTs, STSs and GSSs, complete sequence Length = 139389 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 cggagatcctccagaaaataaacc 34 |||| ||||||||||||||||||| Sbjct: 3903 cggaaatcctccagaaaataaacc 3926
>emb|BX248310.3| Human DNA sequence from clone DASS-311G1 on chromosome 6, complete sequence Length = 116320 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 53239 agagcctgaggcaggaggttccttcagc 53212
>emb|AL845443.3| Human DNA sequence from clone DAQB-48K1 on chromosome 6 Contains the USP8P pseudogene for ubiquitin specific protease 8, the RPL3P2 pseudogene for ribosomal protein L3 pseudogene 2, the WASF5P pseudogene for WAS protein family, member 5, the HLA-B gene for major histocompatibility complex, class I, B, the DHFRP2 pseudogene for dihydrofolate reductase 2, the FGFR3P pseudogene for fibroblast growth factor receptor 3, the HLA-S gene for major histocompatibility complex, class I, S, the MICA gene for MHC class I polypeptide-related sequence A and 3 CpG islands, complete sequence Length = 148076 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 44667 agagcctgaggcaggaggttccttcagc 44640
>emb|AL845556.2| Human DNA sequence from clone XXbac-426A24 on chromosome 6, complete sequence Length = 43003 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 9000 agagcctgaggcaggaggttccttcagc 8973
>emb|AL671883.3| Human DNA sequence from clone XXbac-248L24 on chromosome 6 contains the HLA-C gene for major histocompatibility complex, class I, C, a ubiquitin specific protease 8 (USP8) pseudogene, a ribosomal protein L3 (RPL3) pseudogene, a WAS protein family, member 3 (WASF3) pseudogene, the HLA-B gene for major histocompatibility complex, class I, B, a dihydrofolate reductase pseudogene, a fibroblast growth factor receptor 3 (FGFR3) pseudogene and two CpG islands, complete sequence Length = 120197 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 51441 agagcctgaggcaggaggttccttcagc 51414
>ref|XM_505790.1| Yarrowia lipolytica CLIB122, YALI0F23485g predicted mRNA Length = 2049 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 1995 gaagaagaaggaggagaagaagga 2018
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 agccagcccgccagcgccgtcgcc 108 ||||||||||||||||| |||||| Sbjct: 893140 agccagcccgccagcgcggtcgcc 893117
>ref|XM_795475.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC589829 (LOC589829), partial mRNA Length = 2201 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 agaaggacgagaagaaggac 254 |||||||||||||||||||| Sbjct: 1964 agaaggacgagaagaaggac 1983
>emb|AL118496.22|HSJ136J15 Human DNA sequence from clone RP1-136J15 on chromosome Xq23-24 Contains a mitofusin 1 (MFN1) pseudogene, the KCNE1L gene for potassium voltage-gated channel, Isk-related family, member 1-like, the 3' end of the FACL4 gene for fatty-acid-Coenzyme A ligase long-chain 4, a novel gene and two CpG islands, complete sequence Length = 125465 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 226 agaggaagaagaaggacgagaagaagga 253 |||||||| ||||||| ||||||||||| Sbjct: 44719 agaggaaggagaaggaggagaagaagga 44746
>gb|AC108699.3| Homo sapiens 3q BAC RP11-13I12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 151580 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaag 248 ||||||||||||||||| |||||| Sbjct: 140799 aagaggaagaagaaggaggagaag 140822
>ref|XM_969777.1| PREDICTED: Tribolium castaneum similar to mindbomb homolog 1 (LOC663742), mRNA Length = 3081 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 ggacgagaagaaggacgacg 258 |||||||||||||||||||| Sbjct: 1926 ggacgagaagaaggacgacg 1945
>ref|XM_794661.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC575147 (LOC575147), mRNA Length = 2412 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 agaaggacgagaagaaggac 254 |||||||||||||||||||| Sbjct: 2147 agaaggacgagaagaaggac 2166
>ref|XM_779518.1| PREDICTED: Strongylocentrotus purpuratus similar to Double-stranded RNA-binding protein Staufen homolog (LOC579398), mRNA Length = 2624 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaagga 253 |||||||||||||||||||| Sbjct: 1456 aagaaggacgagaagaagga 1475
>gb|AE008752.1| Salmonella typhimurium LT2, section 56 of 220 of the complete genome Length = 20097 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 ccagcccgccagcgccgtcgccga 110 ||||||||||||||||| |||||| Sbjct: 17267 ccagcccgccagcgccgccgccga 17244
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 agaaggacgagaagaaggacgacg 258 |||||| ||||||||||||||||| Sbjct: 143263 agaaggccgagaagaaggacgacg 143286
>emb|BX927178.8| Human DNA sequence from clone DAMA-387C9 on chromosome 6, complete sequence Length = 106199 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 55446 agagcctgaggcaggaggttccttcagc 55419
>emb|CR759828.5| Human DNA sequence from clone DAMC-153L10 on chromosome 6, complete sequence Length = 102821 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 54892 agagcctgaggcaggaggttccttcagc 54865
>emb|AL929442.9| Mouse DNA sequence from clone RP23-95M20 on chromosome 4, complete sequence Length = 176578 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 4731 gaagaagaaggaggagaagaagga 4708
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 agaagaaggacgagaagaaggacg 255 |||||||||| ||||||||||||| Sbjct: 61322 agaagaaggaggagaagaaggacg 61299
>gb|AF192304.6| Homo sapiens chromosome 8 clone CTC-458A3 map 8q24.3, complete sequence Length = 177028 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 226 agaggaagaagaaggacgagaagaagga 253 ||||||||||||| || ||||||||||| Sbjct: 64608 agaggaagaagaaagaagagaagaagga 64581
>gb|AC146469.23| Pan troglodytes clone rp43-45g24, complete sequence Length = 191684 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 cggagatcctccagaaaataaacc 34 |||| ||||||||||||||||||| Sbjct: 3980 cggaaatcctccagaaaataaacc 3957
>gb|AC069066.22| Homo sapiens 3 BAC RP11-261E7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146446 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaag 248 ||||||||||||||||| |||||| Sbjct: 75150 aagaggaagaagaaggaggagaag 75173
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 aaggagcagctcgaactctacgtc 308 ||||||||||||||||||| |||| Sbjct: 479522 aaggagcagctcgaactcttcgtc 479499
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 agcccgccagcgccgtcgccgaac 112 ||||||||| |||||||||||||| Sbjct: 1752669 agcccgccatcgccgtcgccgaac 1752646
>gb|AC140372.3| Mus musculus BAC clone RP23-185B17 from chromosome 3, complete sequence Length = 180084 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaag 248 ||||||||||||||||| |||||| Sbjct: 112870 aagaggaagaagaaggaggagaag 112847
>gb|AC154805.2| Mus musculus BAC clone RP24-511O23 from chromosome 14, complete sequence Length = 151445 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 17286 gaagaagaaggaggagaagaagga 17309
>dbj|AK080322.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630053J03 product:unclassifiable, full insert sequence Length = 1125 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 82 gaagaagaaggaggagaagaagga 59
>gb|AF289054.1|AF289054 Lymantria xylina nucleopolyhedrovirus helicase-like gene sequence Length = 3646 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gaagaaggacgacgatctgt 264 |||||||||||||||||||| Sbjct: 2099 gaagaaggacgacgatctgt 2080
>ref|NM_072972.2| Caenorhabditis elegans B0222.5 (B0222.5) mRNA, complete cds Length = 1519 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cggagatcctccagaaaata 30 |||||||||||||||||||| Sbjct: 291 cggagatcctccagaaaata 310
>gb|AC009077.7|AC009077 Homo sapiens chromosome 16 clone RP11-331B16, complete sequence Length = 185167 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaag 248 ||||||||||||||||| |||||| Sbjct: 91538 aagaggaagaagaaggaggagaag 91515
>gb|AC158679.8| Mus musculus 6 BAC RP23-345O17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192748 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 aggaagaagaaggacgagaagaag 251 |||||||||||||| ||||||||| Sbjct: 98970 aggaagaagaaggaggagaagaag 98993
>dbj|AK006887.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700065B14 product:stimulated by retinoic acid gene 8, full insert sequence Length = 1796 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagg 252 ||||||||||||||||| ||||||||| Sbjct: 897 aagaggaagaagaaggagtagaagaagg 924
>gb|AC020971.3|AC020971 Mus musculus chromosome 18 clone RP23-56B11, complete sequence Length = 236350 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 190262 gaagaagaaggaggagaagaagga 190239
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 aggaagaagaaggacgagaa 247 |||||||||||||||||||| Sbjct: 24506887 aggaagaagaaggacgagaa 24506906
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 agaagaaggacgagaagaaggacg 255 |||||||||| ||||||||||||| Sbjct: 20183587 agaagaaggaggagaagaaggacg 20183564
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 gaggaagaagaaggacgaga 246 |||||||||||||||||||| Sbjct: 12649009 gaggaagaagaaggacgaga 12649028
>gb|AC040162.5| Homo sapiens chromosome 16 clone CTC-479C5, complete sequence Length = 217470 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaag 248 ||||||||||||||||| |||||| Sbjct: 2842 aagaggaagaagaaggaggagaag 2819
>gb|AC097474.3| Homo sapiens BAC clone RP11-93I21 from 4, complete sequence Length = 156568 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 aggaagaagaaggacgagaagaag 251 |||||||||||||| ||||||||| Sbjct: 117800 aggaagaagaaggaagagaagaag 117823
>gb|AC130462.3| Homo sapiens chromosome 16 clone CTA-67A1, complete sequence Length = 191594 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaag 248 ||||||||||||||||| |||||| Sbjct: 4510 aagaggaagaagaaggaggagaag 4533
>gb|AC092835.4| Homo sapiens BAC clone RP11-11P22 from 2, complete sequence Length = 158404 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 aggaagaagaaggacgagaagaag 251 |||||||||||||| ||||||||| Sbjct: 47244 aggaagaagaaggaggagaagaag 47267
>gb|AC018755.3|AC018755 Homo sapiens chromosome 19, BAC BC330783 (CIT-HSPC_470E3), complete sequence Length = 229155 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 ||||||||||||| |||||||||| Sbjct: 90716 gaagaagaaggacaagaagaagga 90693
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 627372 agagcctgaggcaggaggttccttcagc 627399
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region Length = 1750601 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 177361 agagcctgaggcaggaggttccttcagc 177388
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 gaggaagaagaaggacgaga 246 |||||||||||||||||||| Sbjct: 16038 gaggaagaagaaggacgaga 16057
>gb|AC116118.16| Mus musculus chromosome 16, clone RP23-73P19, complete sequence Length = 128851 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 gaggaagaagaaggacgagaagaa 250 ||||||||||||||| |||||||| Sbjct: 58813 gaggaagaagaaggaggagaagaa 58790
>gb|AC090977.48| Mus musculus strain C57BL/6J clone rp23-213m14 map 16, complete sequence Length = 208412 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 190862 gaagaagaaggaggagaagaagga 190839
>ref|XM_318699.2| Anopheles gambiae str. PEST ENSANGP00000010280 (ENSANGG00000007791), partial mRNA Length = 2127 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaagg 252 |||| |||||||||||||||||| |||| Sbjct: 1288 aagaagaagaagaaggacgagaaaaagg 1315
>gb|AC008109.6|AC008109 Homo sapiens chromosome 18, clone RP11-476K15, complete sequence Length = 166819 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 150694 gaagaagaaggaggagaagaagga 150717
>emb|AL845536.8| Mouse DNA sequence from clone RP23-311G5 on chromosome 2, complete sequence Length = 179612 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 agaggaagaagaaggacgag 245 |||||||||||||||||||| Sbjct: 5537 agaggaagaagaaggacgag 5518
>dbj|AK069934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035E16, full insert sequence Length = 935 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacg 255 |||||||||| ||||||||||||| Sbjct: 368 agaagaaggaggagaagaaggacg 391
>gb|AF034101.2|AF034101 Streptomyces coelicolor ribosomal protein S2 (rpsB) and elongation factor Ts (tsf) genes, complete cds Length = 2162 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 agaaggacgagaagaaggacgacg 258 |||||| ||||||||||||||||| Sbjct: 961 agaaggccgagaagaaggacgacg 984
>gb|AC151896.3| Mus musculus BAC clone RP24-501F15 from 18, complete sequence Length = 189528 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 54722 gaagaagaaggaggagaagaagga 54699
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 ccagcccgccagcgccgtcgccga 110 ||||||||||||||||| |||||| Sbjct: 1777010 ccagcccgccagcgccgccgccga 1777033
>gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, complete genome Length = 161046 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gaagaaggacgacgatctgt 264 |||||||||||||||||||| Sbjct: 96011 gaagaaggacgacgatctgt 95992
>emb|BX544889.5| Mouse DNA sequence from clone RP23-216C16 on chromosome 4, complete sequence Length = 93737 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 67421 gaagaagaaggaggagaagaagga 67398
>gb|AC109616.9| Mus musculus chromosome 19, clone RP23-449C1, complete sequence Length = 167801 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 83678 gaagaagaaggaggagaagaagga 83655
>emb|AL596265.12| Mouse DNA sequence from clone RP23-134O19 on chromosome 12, complete sequence Length = 205332 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 84888 gaagaagaaggaggagaagaagga 84911 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 84683 gaagaagaaggaggagaagaagga 84706
>gb|AC004205.1|AC004205 Homo sapiens clone UWGC:y3c071 from 6p21, complete sequence Length = 41506 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 25604 agagcctgaggcaggaggttccttcagc 25631
>gb|U00922.1|U00922 Gallus gallus myosin binding protein C (MyBP-C) mRNA, complete cds Length = 3488 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 63 gaagaagaaggaggagaagaagga 86
>emb|CT030635.8| Mouse DNA sequence from clone RP23-94N7 on chromosome 9, complete sequence Length = 228508 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 220533 gaagaagaaggaggagaagaagga 220556
>emb|CT010490.10| Mouse DNA sequence from clone RP23-148P12 on chromosome 16, complete sequence Length = 206348 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 gaggaagaagaaggacgagaagaa 250 ||||||||||||||| |||||||| Sbjct: 136093 gaggaagaagaaggaggagaagaa 136070
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 agaagaaggacgagaagaaggacg 255 |||||||||| ||||||||||||| Sbjct: 20194863 agaagaaggaggagaagaaggacg 20194840
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 aggaagaagaaggacgagaa 247 |||||||||||||||||||| Sbjct: 24435093 aggaagaagaaggacgagaa 24435112
>gb|AC004210.1|AC004210 Homo sapiens clone UWGC:y5c028 from 6p21, complete sequence Length = 42601 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 29112 agagcctgaggcaggaggttccttcagc 29139
>emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb0049H14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120071 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 aggaagaagaaggacgagaa 247 |||||||||||||||||||| Sbjct: 77918 aggaagaagaaggacgagaa 77937
>gb|U00923.1|GGU00923 Gallus gallus myosin binding protein C (MyBP-C) mRNA, partial cds Length = 784 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 63 gaagaagaaggaggagaagaagga 86
>gb|AC132615.5| Mus musculus BAC clone RP23-301J15 from 9, complete sequence Length = 201718 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 225 aagaggaagaagaaggacgagaagaaggacga 256 |||||||||||||| || |||| ||||||||| Sbjct: 117192 aagaggaagaagaaagaagagatgaaggacga 117161
>gb|AC125066.5| Mus musculus BAC clone RP23-430N17 from 16, complete sequence Length = 197813 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ggagatcctccagaaaataa 31 |||||||||||||||||||| Sbjct: 93159 ggagatcctccagaaaataa 93178
>gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, complete sequence Length = 192355 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaag 248 ||||||||||||||||| |||||| Sbjct: 146788 aagaggaagaagaaggaggagaag 146811
>emb|AL627269.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 5/20 Length = 254050 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 ccagcccgccagcgccgtcgccga 110 ||||||||||||||||| |||||| Sbjct: 151173 ccagcccgccagcgccgccgccga 151150
>emb|AL935327.12| Mouse DNA sequence from clone RP23-259I23 on chromosome 2, complete sequence Length = 127391 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 gaggaagaagaaggacgagaagaa 250 ||||||||||||||||||| |||| Sbjct: 121971 gaggaagaagaaggacgaggagaa 121948
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 3077846 gaagaagaaggaggagaagaagga 3077823
>gb|U19858.1|SAU19858 Streptomyces antibioticus guanosine pentaphosphate synthetase (gpsI) gene, complete cds Length = 2838 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 ggacgagaagaaggacgacg 258 |||||||||||||||||||| Sbjct: 2623 ggacgagaagaaggacgacg 2642
>gb|AC161865.4| Mus musculus chromosome 19, clone RP23-218F7, complete sequence Length = 206019 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 agaggaagaagaaggacgagaaga 249 |||||||||||||||| ||||||| Sbjct: 97283 agaggaagaagaaggaggagaaga 97260
>emb|AL844553.4| Mouse DNA sequence from clone RP23-255J15 on chromosome 2, complete sequence Length = 82080 Score = 40.1 bits (20), Expect = 6.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaaggacgacgat 260 |||| |||||||||| | ||||||||||||||||| Sbjct: 36238 aagaagaagaagaagaagaagaagaaggacgacgat 36273
>emb|AL683879.19| Mouse DNA sequence from clone RP23-36D5 on chromosome 11, complete sequence Length = 202441 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 156534 gaagaagaaggaggagaagaagga 156557
>gb|AC159239.3| Mus musculus BAC clone RP24-496E14 from chromosome 13, complete sequence Length = 206286 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 197707 gaagaagaaggaggagaagaagga 197730
>gb|AC168266.2| Mus musculus BAC clone RP24-245G1 from chromosome 9, complete sequence Length = 188778 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 225 aagaggaagaagaaggacgagaagaaggacga 256 |||||||||||||| || |||| ||||||||| Sbjct: 155786 aagaggaagaagaaagaagagatgaaggacga 155817
>dbj|D84394.1| Homo sapiens genomic DNA, 237 kb segment from 6p21.3 region including HLA genes, complete sequence Length = 236822 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 agagcatgaggcaggaggttcgttcagc 382 ||||| ||||||||||||||| |||||| Sbjct: 98542 agagcctgaggcaggaggttccttcagc 98569
>dbj|AP005119.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-288C17, complete sequences Length = 143259 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 110457 gaagaagaaggaggagaagaagga 110434 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,748,119 Number of Sequences: 3902068 Number of extensions: 3748119 Number of successful extensions: 88016 Number of sequences better than 10.0: 238 Number of HSP's better than 10.0 without gapping: 238 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86782 Number of HSP's gapped (non-prelim): 1232 length of query: 486 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 464 effective length of database: 17,147,199,772 effective search space: 7956300694208 effective search space used: 7956300694208 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)