ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl28a02 |
|---|---|
| Clone Library Name | barley_pub |
>ZEP2_RAT (Q00900) Human immunodeficiency virus type I enhancer-binding| protein 2 homolog (DNA-binding protein AGIE-BP1) (Angiotensinogen gene-inducible enhancer-binding protein 1) (Myc intron-binding protein 1) Length = 2437 Score = 32.0 bits (71), Expect = 0.36 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = +2 Query: 8 PPTPLSLAPRDSKPGSLPPKPYGEFHASLLRILEPQIRAPPLPSDGSR 151 PP PL +A R PGSL G +L I + I PLP++GS+ Sbjct: 299 PPIPLDIASRGGYPGSLEESLGGPMKVPILIIPKSGI---PLPNEGSQ 343
>EBNA2_EBV (P12978) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)| (EBNA-2) Length = 487 Score = 32.0 bits (71), Expect = 0.36 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +2 Query: 8 PPTPLSLAPRDSKPGSLPPKPYGEFHASLLRILEPQIRAPPLPS 139 PP L++ PR ++P +LPP P LL +L+ P PS Sbjct: 207 PPATLTVPPRPTRPTTLPPTP-------LLTVLQRPTELQPTPS 243
>EBNA2_EBVG (Q3KSV2) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)| (EBNA-2) (EBNA2) Length = 451 Score = 32.0 bits (71), Expect = 0.36 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +2 Query: 8 PPTPLSLAPRDSKPGSLPPKPYGEFHASLLRILEPQIRAPPLPS 139 PP L++ PR ++P +LPP P LL +L+ P PS Sbjct: 173 PPATLTVPPRPTRPTTLPPTP-------LLTVLQRPTELQPTPS 209
>LCP2_MOUSE (Q60787) Lymphocyte cytosolic protein 2 (SH2 domain-containing| leucocyte protein of 76 kDa) (SLP-76 tyrosine phosphoprotein) (SLP76) Length = 533 Score = 31.6 bits (70), Expect = 0.47 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = +2 Query: 8 PPTPLSLAPRDSKPGSLPPKP--YGEFHASLLRILEPQIRAPPLPSDGSRCRRRRLVG 175 PP SLAP D +P L KP + A L R P+I+ PPLP R R +G Sbjct: 241 PPLDRSLAPLDREPFILGKKPPFSDKPSAPLGREHLPKIQKPPLPPAMDRHERNERLG 298
>DDEF1_MOUSE (Q9QWY8) 130-kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1| GTPase-activating protein (PIP2-dependent ARF1 GAP) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differe Length = 1147 Score = 30.8 bits (68), Expect = 0.80 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 6/27 (22%) Frame = +2 Query: 8 PPTPLSLAPRDS------KPGSLPPKP 70 PP P+ LAP+ KPG LPPKP Sbjct: 958 PPKPVELAPKPQVGELPPKPGELPPKP 984
>SF3A2_HUMAN (Q15428) Splicing factor 3A subunit 2 (Spliceosome-associated| protein 62) (SAP 62) (SF3a66) Length = 464 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Frame = +2 Query: 2 KNPPTPL--SLAPRDSKPGSLPPKPYGEFHASLLRILEPQIRAPPLP 136 K PP PL L PR P SLPP P G + P PP P Sbjct: 231 KRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGP 277
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2160 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/47 (34%), Positives = 20/47 (42%) Frame = +2 Query: 11 PTPLSLAPRDSKPGSLPPKPYGEFHASLLRILEPQIRAPPLPSDGSR 151 P+PL+ P + PGS PP+ R PP P DG R Sbjct: 1693 PSPLNAVPCEGPPGSEPPR-----------------RPPPAPHDGDR 1722
>DDEF1_HUMAN (Q9ULH1) 130-kDa phosphatidylinositol 4,5-biphosphate-dependent| ARF1 GTPase-activating protein (PIP2-dependent ARF1 GAP) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differe Length = 956 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 6/27 (22%) Frame = +2 Query: 8 PPTPLSLAPRDS------KPGSLPPKP 70 PP P LAP+ KPG LPPKP Sbjct: 767 PPKPTELAPKPQIGDLPPKPGELPPKP 793
>RSP6_CAEEL (Q18409) Probable splicing factor, arginine/serine-rich 6| (RNA-binding protein srp-1) (CeSRp20) Length = 179 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/47 (38%), Positives = 20/47 (42%) Frame = -1 Query: 159 RRQRDPSEGRGGARICGSRIRRSEAWNSP*GLGGREPGFESRGASER 19 R D G+RICG R R + G GGR GF RG R Sbjct: 50 RDAEDAVRALDGSRICGVRARVELSTGQRRGGGGRGGGFGGRGGGGR 96
>CAND2_HUMAN (O75155) Cullin-associated NEDD8-dissociated protein 2| (Cullin-associated and neddylation-dissociated protein 2) (p120 CAND2) Length = 1119 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/36 (47%), Positives = 20/36 (55%) Frame = +2 Query: 68 PYGEFHASLLRILEPQIRAPPLPSDGSRCRRRRLVG 175 P G FHASLL L PQ+ +P L R+R VG Sbjct: 75 PLGAFHASLLHCLLPQLSSPRL------AVRKRAVG 104
>GAR1_ASHGO (Q757V8) H/ACA ribonucleoprotein complex subunit 1 (snoRNP protein| GAR1) Length = 212 Score = 29.6 bits (65), Expect = 1.8 Identities = 20/57 (35%), Positives = 25/57 (43%) Frame = -1 Query: 174 PTSRRRRQRDPSEGRGGARICGSRIRRSEAWNSP*GLGGREPGFESRGASERGVGGF 4 P +R+R + GRGG G R + G GG GF RG + G GGF Sbjct: 133 PKPKRKRAAGGAPGRGGF---GGRGGSRGGFG---GRGGARGGFGGRGGARGGFGGF 183
>SF3A2_MOUSE (Q62203) Splicing factor 3A subunit 2 (Spliceosome-associated| protein 62) (SAP 62) (SF3a66) Length = 475 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Frame = +2 Query: 2 KNPPTPL--SLAPRDSKPGSLPPKPYGEFHASLLRILEPQIRAPPLP 136 K PP PL L PR P +LPP P G + P PP P Sbjct: 221 KRPPPPLMNGLPPRPPLPDALPPPPPGGLPLPPMPPTGPAPSGPPGP 267
>DDEF1_BOVIN (O97902) 130-kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1| GTPase-activating protein (PIP2-dependent ARF1 GAP) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differe Length = 1129 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 6/27 (22%) Frame = +2 Query: 8 PPTPLSLAPRDS------KPGSLPPKP 70 PP P LAP+ KPG LPPKP Sbjct: 946 PPKPTELAPKPPIGDLPPKPGELPPKP 972
>SI1L3_HUMAN (O60292) Signal-induced proliferation-associated 1-like protein 3| (SPA-1-like protein 3) Length = 1781 Score = 29.3 bits (64), Expect = 2.3 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Frame = -1 Query: 174 PTSRRRRQRD-PSEGRGGARICGSRIRRSEAWNSP*GLGGREPGFESRGAS 25 PT + + R P+ G GG S I R + P G GR PG G S Sbjct: 276 PTKEKEKARKKPARGLGGGDTVDSSIFRKLRSSKPEGEAGRSPGEADEGRS 326
>CAND2_MOUSE (Q6ZQ73) Cullin-associated NEDD8-dissociated protein 2| (Cullin-associated and neddylation-dissociated protein 2) (p120 CAND2) (TBP-interacting protein TIP120B) (TBP-interacting protein of 120 kDa B) Length = 1235 Score = 29.3 bits (64), Expect = 2.3 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +2 Query: 68 PYGEFHASLLRILEPQIRAPPL 133 P G FHASLL L PQ+ +P L Sbjct: 168 PLGTFHASLLHCLLPQLSSPRL 189
>CAND2_RAT (Q9R0L4) Cullin-associated NEDD8-dissociated protein 2| (Cullin-associated and neddylation-dissociated protein 2) (p120 CAND2) (TBP-interacting protein TIP120B) (TBP-interacting protein of 120 kDa B) (TBP-interacting protein b) Length = 1273 Score = 29.3 bits (64), Expect = 2.3 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +2 Query: 68 PYGEFHASLLRILEPQIRAPPL 133 P G FHASLL L PQ+ +P L Sbjct: 206 PLGTFHASLLHCLLPQLSSPRL 227
>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein| 1) (NDPP-1) Length = 802 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/45 (40%), Positives = 19/45 (42%) Frame = +2 Query: 11 PTPLSLAPRDSKPGSLPPKPYGEFHASLLRILEPQIRAPPLPSDG 145 PTP L P PP P G +AS L PPLPS G Sbjct: 533 PTPQGLVLGPPAPPPPPPLPSGPAYASALPPPPGPPPPPPLPSTG 577
>ACPS_BORPA (Q7W9J6) Holo-[acyl-carrier-protein] synthase (EC 2.7.8.7)| (Holo-ACP synthase) (4'-phosphopantetheinyl transferase acpS) Length = 153 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = -1 Query: 159 RRQRDPSEGRGGARICGSRIRRSEAWNSP*GLGGREPGFESRGASERGVGG 7 RR+RDP+ G R +R EA++ GLG R P R + +GG Sbjct: 58 RRRRDPARG---VRFLATRFAAKEAFSKAIGLGMRMPMSWRRVQTLNALGG 105
>LCP2_HUMAN (Q13094) Lymphocyte cytosolic protein 2 (SH2 domain-containing| leucocyte protein of 76 kDa) (SLP-76 tyrosine phosphoprotein) (SLP76) Length = 533 Score = 28.5 bits (62), Expect = 4.0 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 5/56 (8%) Frame = +2 Query: 8 PPTPLSLAPRDSKPGSLPPKPYGEFHASL-----LRILEPQIRAPPLPSDGSRCRR 160 PP SLAP D +P +L KP S+ L P+I+ PPLP R R Sbjct: 241 PPLDRSLAPFDREPFTLGKKPPFSDKPSIPAGRSLGEHLPKIQKPPLPPTTERHER 296
>DOCK4_MOUSE (P59764) Dedicator of cytokinesis protein 4| Length = 1978 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Frame = +2 Query: 11 PTPLSLA-PRDSKPGSLPPKPYGEFHASL---LRILEPQIRAPPLP 136 P P SL+ P S+P +LPPKP + L R EP R PLP Sbjct: 1927 PLPHSLSIPVTSEPPALPPKPLAARSSHLENGTRRTEPGPRPRPLP 1972
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 24.3 bits (51), Expect(2) = 4.1 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +3 Query: 126 LPSPPMDPAAAGAG 167 +P PPM P AAG G Sbjct: 261 MPPPPMPPGAAGHG 274 Score = 22.7 bits (47), Expect(2) = 4.1 Identities = 13/42 (30%), Positives = 17/42 (40%) Frame = +2 Query: 11 PTPLSLAPRDSKPGSLPPKPYGEFHASLLRILEPQIRAPPLP 136 P P S P PG+LPP + P + PP+P Sbjct: 238 PPPGSFPPPVPPPGALPPG------------IPPAMPPPPMP 267
>PPB_ESCFE (P21948) Alkaline phosphatase precursor (EC 3.1.3.1) (APase)| Length = 472 Score = 28.1 bits (61), Expect = 5.2 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 8/63 (12%) Frame = -3 Query: 205 TVRRCHASSVSHEPAPAAAGSIGGEG--------RRSDLRLQDPEERGMEFPVGFGWEGT 50 T R+C+ SV+ E P A GG+G R+D+ L + E W+G Sbjct: 187 TSRKCYGPSVTSEKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAGEWQGK 246 Query: 49 WLR 41 LR Sbjct: 247 TLR 249
>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2| Length = 964 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -3 Query: 187 ASSVSHEPAPAAAGSIGGEGRRSDLRLQDPEERG 86 A++ S PAPA GS G+G++ R D ++G Sbjct: 307 AAAPSQPPAPAPGGSRPGKGKKGGERSWDDNKKG 340
>K1949_MOUSE (Q8BQ30) Protein KIAA1949 homolog| Length = 594 Score = 23.9 bits (50), Expect(2) = 6.6 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +2 Query: 8 PPTPLSLAPRDSKPGSLPPKPYGE 79 PPTP L+P S P + P+P G+ Sbjct: 405 PPTPAPLSPPPSAPTA--PQPSGD 426 Score = 22.3 bits (46), Expect(2) = 6.6 Identities = 10/17 (58%), Positives = 14/17 (82%), Gaps = 3/17 (17%) Frame = +3 Query: 129 PSPPMDPA---AAGAGS 170 P+PP++PA AAG+GS Sbjct: 465 PAPPVNPATADAAGSGS 481
>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +2 Query: 8 PPTPLSLAPRDSKPGSLPPKPYGE 79 PP+PLSL S P PP P G+ Sbjct: 239 PPSPLSLPRPRSAPARRPPAPSGD 262
>SM41_HEMPU (Q26264) 41 kDa spicule matrix protein precursor (HSM41) (HPSMC)| Length = 407 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 3/28 (10%) Frame = -1 Query: 81 NSP*GLGGREPGFESR---GASERGVGG 7 N P G+GGR+PGF ++ G + GVGG Sbjct: 288 NQP-GVGGRQPGFGNQPGMGGQQPGVGG 314
>DED1_USTMA (Q4P733) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 27.3 bits (59), Expect = 8.9 Identities = 20/53 (37%), Positives = 24/53 (45%) Frame = -1 Query: 159 RRQRDPSEGRGGARICGSRIRRSEAWNSP*GLGGREPGFESRGASERGVGGFF 1 R R GRGGA G+R R+ N P GGR G G G+GG + Sbjct: 596 RGGRGRGRGRGGASSFGNRDART--MNGPSSGGGRGFGGGYGGGMGGGLGGSY 646
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/46 (32%), Positives = 19/46 (41%) Frame = +2 Query: 14 TPLSLAPRDSKPGSLPPKPYGEFHASLLRILEPQIRAPPLPSDGSR 151 +PL+ P + PGS PP+ R PP P DG R Sbjct: 1691 SPLNAVPCEGPPGSEPPR-----------------RPPPAPHDGDR 1719
>UL34_HCMVA (P16812) Hypothetical protein UL34| Length = 407 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +2 Query: 47 PGSLPPKPYGEFHASLLRILEPQIRAPPLPSD 142 P L P + AS+ L+P +R PP P+D Sbjct: 88 PAELDPHEIQQVTASIRCRLQPSLREPPTPAD 119
>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 493 Score = 27.3 bits (59), Expect = 8.9 Identities = 20/48 (41%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Frame = +2 Query: 8 PPTPLSLAPRDSKPGS--LPPKPYGEFHASLLRILEPQIRAPPLPSDG 145 PP P P S+PG LPP E R L APPLPS G Sbjct: 299 PPPP----PPPSRPGPPPLPPASNDEIPRLPQRNLSLTSSAPPLPSPG 342
>PP16A_MOUSE (Q923M0) Protein phosphatase 1 regulatory subunit 16A (Myosin| phosphatase targeting subunit 3) Length = 524 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Frame = -3 Query: 214 RMSTVRRCHASS--VSHEPAPAAAGSIGGEGRRSD--LRLQDPEERGME 80 R + R+ HA V +P P + + E R++D LRLQ PE+ G E Sbjct: 357 RTNLYRKEHAQEAIVWQQPPPTSPEPLEDEDRQTDAELRLQPPEDDGPE 405
>M4K2_HUMAN (Q12851) Mitogen-activated protein kinase kinase kinase kinase 2| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 2) (MEK kinase kinase 2) (MEKKK 2) (Germinal center kinase) (GC kinase) (Rab8-interacting protein) (B lymphocyte serine/threonine-pro Length = 819 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +2 Query: 8 PPTPLSLAPRDSKPGSLPPKPYGEFHASLL 97 P P + P S PG+LPP P G + LL Sbjct: 411 PTDPPAEEPLSSPPGTLPPPPSGPNSSPLL 440
>ESR1_HUMAN (P03372) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)| Length = 595 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -1 Query: 165 RRRRQRDPSEGRGGARICGSRIRRSEAWNSP 73 + +RQRD EGRG G +R + W SP Sbjct: 266 KHKRQRDDGEGRGEVGSAGD-MRAANLWPSP 295
>4CL2_ORYSA (Q42982) 4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2)| (4-coumaroyl-CoA synthase 2) Length = 569 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -3 Query: 169 EPAPAAAGSIGGEGRRSDLRLQDPE 95 EP PA +GS G R ++L++ DP+ Sbjct: 381 EPTPAKSGSCGTVVRNAELKVVDPD 405
>DOCK4_HUMAN (Q8N1I0) Dedicator of cytokinesis protein 4| Length = 1966 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Frame = +2 Query: 11 PTPLSLA-PRDSKPGSLPPKPYGEFHASL---LRILEPQIRAPPLP 136 P P SL+ P S+P +LPPKP + L R +P R PLP Sbjct: 1915 PLPHSLSIPVTSEPPALPPKPLAARSSHLENGARRTDPGPRPRPLP 1960
>CBLBB_XENLA (Q6NRE7) E3 ubiquitin-protein ligase CBL-B-B (EC 6.3.2.-) (Signal| transduction protein CBL-B-B) (SH3-binding protein CBL-B-B) Length = 764 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/51 (31%), Positives = 21/51 (41%) Frame = +2 Query: 5 NPPTPLSLAPRDSKPGSLPPKPYGEFHASLLRILEPQIRAPPLPSDGSRCR 157 +P + +A + KP PP P E P R PP+P D CR Sbjct: 541 SPKSSPCMARKQDKPLPAPPPPLREPPP-------PPERPPPIPPDSRTCR 584 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,322,230 Number of Sequences: 219361 Number of extensions: 745939 Number of successful extensions: 3035 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 2785 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3022 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
