ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl27h12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187597.1| Oryza sativa (japonica cultivar-group), predic... 111 8e-22
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 111 8e-22
3gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome... 111 8e-22
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 111 8e-22
5gb|AY130970.1| Mycobacterium avium strain A5 glycopeptidolipid b... 44 0.16
6gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 44 0.16
7gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, co... 42 0.61
8gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 0.61
9ref|XM_467555.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.4
10gb|AC144400.2| Lemur catta clone LBNL2-87E20, complete sequence 40 2.4
11emb|AL117344.12|HSJ395C13 Human DNA sequence from clone RP3-395C... 40 2.4
12dbj|AK125637.1| Homo sapiens cDNA FLJ43649 fis, clone SYNOV4001326 40 2.4
13ref|XM_925812.1| PREDICTED: Homo sapiens hypothetical gene suppo... 40 2.4
14gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosom... 40 2.4
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.4
16gb|AC090425.15| Homo sapiens 3 BAC RP11-15L13 (Roswell Park Canc... 40 2.4
17gb|AC073896.41| Homo sapiens 12 BAC RP11-977G19 (Roswell Park Ca... 40 2.4
18ref|NM_001013682.1| Homo sapiens hypothetical gene supported by ... 40 2.4
19dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.4
20dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.4
21emb|AL772319.13| Mouse DNA sequence from clone RP23-397E2 on chr... 40 2.4
22emb|AL954151.8| Mouse DNA sequence from clone RP24-370P7 on chro... 40 2.4
23gb|BT017836.1| Zea mays clone EL01N0509F09.c mRNA sequence 38 9.6
24gb|AF095703.1| Homo sapiens short chain L-3-hydroxyacyl-CoA dehy... 38 9.6
25gb|AC125110.4| Mus musculus BAC clone RP24-235E14 from chromosom... 38 9.6
26gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare str... 38 9.6
27emb|AL109964.20|HS1118M15 Human DNA sequence from clone RP5-1118... 38 9.6
28emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2 38 9.6
29emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 38 9.6
30emb|BX640426.1| Bordetella parapertussis strain 12822, complete ... 38 9.6
31gb|AC122210.5| Mus musculus BAC clone RP23-96G7 from chromosome ... 38 9.6
32gb|AC118062.4| Homo sapiens BAC clone RP11-637E17 from 4, comple... 38 9.6
33gb|AC149292.15| Sus scrofa clone ch242-69g11, complete sequence 38 9.6
34gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete seq... 38 9.6
35gb|AC158670.5| Mus musculus 6 BAC RP23-82N21 (Roswell Park Cance... 38 9.6
36gb|AC158654.3| Mus musculus 6 BAC RP24-375H22 (Roswell Park Canc... 38 9.6
37gb|AC115222.3| Homo sapiens BAC clone RP11-48F23 from 4, complet... 38 9.6
38dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 38 9.6
39emb|AJ334208.1|HSA334208 Homo sapiens genomic sequence surroundi... 38 9.6
40gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F1... 38 9.6
41gb|AC004059.2|AC004059 Homo sapiens chromosome 4 clone B266E3 ma... 38 9.6
42dbj|AP003049.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 38 9.6
43gb|AC139099.2| Homo sapiens chromosome 17, clone G549, complete ... 38 9.6
44emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on ch... 38 9.6 
>ref|NM_187597.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2583

 Score =  111 bits (56), Expect = 8e-22
 Identities = 65/68 (95%)
 Strand = Plus / Plus

                                                                       
Query: 126 tcctactccaacctgcttgacctggccacgggcgcggcggaccaggggccggcgccggcg 185
           ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 13  tcctactccaacctgctggacctggccaccggcgcggcggaccaggcgccggcgccggcg 72

                   
Query: 186 gcgctcgg 193
           ||||||||
Sbjct: 73  gcgctcgg 80
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  111 bits (56), Expect = 8e-22
 Identities = 65/68 (95%)
 Strand = Plus / Minus

                                                                           
Query: 126     tcctactccaacctgcttgacctggccacgggcgcggcggaccaggggccggcgccggcg 185
               ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 6490712 tcctactccaacctgctggacctggccaccggcgcggcggaccaggcgccggcgccggcg 6490653

                       
Query: 186     gcgctcgg 193
               ||||||||
Sbjct: 6490652 gcgctcgg 6490645



 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 170      ggggccggcgccggcggcg 188
                |||||||||||||||||||
Sbjct: 10914380 ggggccggcgccggcggcg 10914398
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>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0081P02, complete sequence
          Length = 162425

 Score =  111 bits (56), Expect = 8e-22
 Identities = 65/68 (95%)
 Strand = Plus / Minus

                                                                         
Query: 126   tcctactccaacctgcttgacctggccacgggcgcggcggaccaggggccggcgccggcg 185
             ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 33474 tcctactccaacctgctggacctggccaccggcgcggcggaccaggcgccggcgccggcg 33415

                     
Query: 186   gcgctcgg 193
             ||||||||
Sbjct: 33414 gcgctcgg 33407
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  111 bits (56), Expect = 8e-22
 Identities = 65/68 (95%)
 Strand = Plus / Minus

                                                                           
Query: 126     tcctactccaacctgcttgacctggccacgggcgcggcggaccaggggccggcgccggcg 185
               ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 6489925 tcctactccaacctgctggacctggccaccggcgcggcggaccaggcgccggcgccggcg 6489866

                       
Query: 186     gcgctcgg 193
               ||||||||
Sbjct: 6489865 gcgctcgg 6489858



 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 170      ggggccggcgccggcggcg 188
                |||||||||||||||||||
Sbjct: 10912481 ggggccggcgccggcggcg 10912499
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>gb|AY130970.1| Mycobacterium avium strain A5 glycopeptidolipid biosynthesis gene
             cluster, partial sequence
          Length = 27516

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 168   caggggccggcgccggcggcgctcgg 193
             |||| |||||||||||||||||||||
Sbjct: 17523 caggtgccggcgccggcggcgctcgg 17498
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 168     caggggccggcgccggcggcgctcgg 193
               |||| |||||||||||||||||||||
Sbjct: 1812745 caggtgccggcgccggcggcgctcgg 1812720



 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 170     ggggccggcgccggcggcgct 190
               |||||||||||||||||||||
Sbjct: 1132440 ggggccggcgccggcggcgct 1132460
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>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence
          Length = 268984

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 169    aggggccggcgccggcggcgc 189
              |||||||||||||||||||||
Sbjct: 189776 aggggccggcgccggcggcgc 189796
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                    
Query: 154     cgggcgcggcggaccaggggccggcgccggcggcgct 190
               ||||||||||||| |||| ||| |||| |||||||||
Sbjct: 3092253 cgggcgcggcggagcaggcgcccgcgctggcggcgct 3092217



 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 170     ggggccggcgccggcggcgc 189
               ||||||||||||||||||||
Sbjct: 3331816 ggggccggcgccggcggcgc 3331835



 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 149     ggccacgggcgcggcggacc 168
               ||||||||||||||||||||
Sbjct: 1839286 ggccacgggcgcggcggacc 1839267



 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 174     ccggcgccggcggcgctcg 192
               |||||||||||||||||||
Sbjct: 2007467 ccggcgccggcggcgctcg 2007485
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>ref|XM_467555.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 840

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 ggccggcgccggcggcgctc 191
           ||||||||||||||||||||
Sbjct: 234 ggccggcgccggcggcgctc 253
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>gb|AC144400.2| Lemur catta clone LBNL2-87E20, complete sequence
          Length = 181705

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    cgggaggaggccatggtgtc 121
              ||||||||||||||||||||
Sbjct: 106586 cgggaggaggccatggtgtc 106567
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>emb|AL117344.12|HSJ395C13 Human DNA sequence from clone RP3-395C13 on chromosome 6q25.2-26
             Contains the 5' end of a novel gene, a hypothetical
             protein PNAS-131 pseudogene and a CpG island, complete
             sequence
          Length = 150336

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     gcgcctcccttcttcctcct 25
             ||||||||||||||||||||
Sbjct: 12867 gcgcctcccttcttcctcct 12848
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>dbj|AK125637.1| Homo sapiens cDNA FLJ43649 fis, clone SYNOV4001326
          Length = 3837

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   gcgcctcccttcttcctcct 25
           ||||||||||||||||||||
Sbjct: 123 gcgcctcccttcttcctcct 142
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>ref|XM_925812.1| PREDICTED: Homo sapiens hypothetical gene supported by AK125637
           (LOC401280), mRNA
          Length = 3823

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   gcgcctcccttcttcctcct 25
           ||||||||||||||||||||
Sbjct: 117 gcgcctcccttcttcctcct 136
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>gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosome unknown, complete
              sequence
          Length = 212960

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 170    ggggccggcgccggcggcgctcgg 193
              |||||||||| |||||||||||||
Sbjct: 165816 ggggccggcggcggcggcgctcgg 165793
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 172      ggccggcgccggcggcgctc 191
                ||||||||||||||||||||
Sbjct: 30136633 ggccggcgccggcggcgctc 30136614
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>gb|AC090425.15| Homo sapiens 3 BAC RP11-15L13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 97868

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     cgcctcccttcttcctcctg 26
             ||||||||||||||||||||
Sbjct: 38628 cgcctcccttcttcctcctg 38609
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>gb|AC073896.41| Homo sapiens 12 BAC RP11-977G19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 174487

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     gcctcccttcttcctcctgg 27
             ||||||||||||||||||||
Sbjct: 85956 gcctcccttcttcctcctgg 85975
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>ref|NM_001013682.1| Homo sapiens hypothetical gene supported by AK125637 (LOC401280),
           mRNA
          Length = 3837

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   gcgcctcccttcttcctcct 25
           ||||||||||||||||||||
Sbjct: 123 gcgcctcccttcttcctcct 142
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>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0685G12
          Length = 149155

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    ggccggcgccggcggcgctc 191
              ||||||||||||||||||||
Sbjct: 116230 ggccggcgccggcggcgctc 116211
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>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1124_G07
          Length = 93240

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 172  ggccggcgccggcggcgctc 191
            ||||||||||||||||||||
Sbjct: 9337 ggccggcgccggcggcgctc 9318
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>emb|AL772319.13| Mouse DNA sequence from clone RP23-397E2 on chromosome 4, complete
           sequence
          Length = 206709

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 12  cccttcttcctcctggactt 31
           ||||||||||||||||||||
Sbjct: 786 cccttcttcctcctggactt 805
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>emb|AL954151.8| Mouse DNA sequence from clone RP24-370P7 on chromosome 4, complete
            sequence
          Length = 3994

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 12   cccttcttcctcctggactt 31
            ||||||||||||||||||||
Sbjct: 2780 cccttcttcctcctggactt 2799
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>gb|BT017836.1| Zea mays clone EL01N0509F09.c mRNA sequence
          Length = 1379

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 163 cggaccaggggccggcgccggcg 185
           |||| ||||||||||||||||||
Sbjct: 464 cggagcaggggccggcgccggcg 442
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>gb|AF095703.1| Homo sapiens short chain L-3-hydroxyacyl-CoA dehydrogenase precursor
             (HADHSC) gene, nuclear gene encoding mitochondrial
             protein, complete cds
          Length = 50748

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 57    tccccaaatccctcccctt 75
             |||||||||||||||||||
Sbjct: 35523 tccccaaatccctcccctt 35505
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>gb|AC125110.4| Mus musculus BAC clone RP24-235E14 from chromosome 18, complete sequence
          Length = 187634

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 14     cttcttcctcctggacttc 32
              |||||||||||||||||||
Sbjct: 149489 cttcttcctcctggacttc 149471
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>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05,
             from chromosome 3, complete sequence
          Length = 127348

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 170   ggggccggcgccggcggcg 188
             |||||||||||||||||||
Sbjct: 66649 ggggccggcgccggcggcg 66631
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>emb|AL109964.20|HS1118M15 Human DNA sequence from clone RP5-1118M15 on chromosome 20 Contains the
             3' end of the CTNNBL1 gene for catenin beta like 1, the
             C20orf102 gene for a novel Immunoglobulin
             domain-containing protein and a CpG Island, complete
             sequence
          Length = 95851

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     cctcccttcttcctcctgg 27
             |||||||||||||||||||
Sbjct: 62691 cctcccttcttcctcctgg 62709
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>emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2
          Length = 223670

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 146   cctggccacgggcgcggcggacc 168
             ||||| |||||||||||||||||
Sbjct: 76495 cctgggcacgggcgcggcggacc 76517
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>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 172    ggccggcgccggcggcgct 190
              |||||||||||||||||||
Sbjct: 304096 ggccggcgccggcggcgct 304114
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>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14
          Length = 348866

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 172   ggccggcgccggcggcgct 190
             |||||||||||||||||||
Sbjct: 67884 ggccggcgccggcggcgct 67902
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>gb|AC122210.5| Mus musculus BAC clone RP23-96G7 from chromosome 10, complete sequence
          Length = 231988

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      gcctcccttcttcctcctg 26
              |||||||||||||||||||
Sbjct: 151045 gcctcccttcttcctcctg 151063
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>gb|AC118062.4| Homo sapiens BAC clone RP11-637E17 from 4, complete sequence
          Length = 107609

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 57    tccccaaatccctcccctt 75
             |||||||||||||||||||
Sbjct: 24156 tccccaaatccctcccctt 24138
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>gb|AC149292.15| Sus scrofa clone ch242-69g11, complete sequence
          Length = 215342

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 48    ccccaattctccccaaatc 66
             |||||||||||||||||||
Sbjct: 10229 ccccaattctccccaaatc 10211
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>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence
          Length = 135209

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 167   ccaggggccggcgccggcggcgc 189
             ||||| |||||||||||||||||
Sbjct: 51312 ccaggcgccggcgccggcggcgc 51290
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>gb|AC158670.5| Mus musculus 6 BAC RP23-82N21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 227520

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 56     ctccccaaatccctcccctttct 78
              ||||||||||| |||||||||||
Sbjct: 166560 ctccccaaatctctcccctttct 166538
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>gb|AC158654.3| Mus musculus 6 BAC RP24-375H22 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 190192

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 56    ctccccaaatccctcccctttct 78
             ||||||||||| |||||||||||
Sbjct: 61131 ctccccaaatctctcccctttct 61109
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>gb|AC115222.3| Homo sapiens BAC clone RP11-48F23 from 4, complete sequence
          Length = 127707

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 54     ttctccccaaatccctccc 72
              |||||||||||||||||||
Sbjct: 109730 ttctccccaaatccctccc 109748
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 175     cggcgccggcggcgctcgg 193
               |||||||||||||||||||
Sbjct: 3647944 cggcgccggcggcgctcgg 3647962
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>emb|AJ334208.1|HSA334208 Homo sapiens genomic sequence surrounding NotI site, clone NB6-252R
          Length = 687

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 170 ggggccggcgccggcggcg 188
           |||||||||||||||||||
Sbjct: 82  ggggccggcgccggcggcg 64
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>gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F19 php20725 region, complete
             sequence
          Length = 70311

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 170   ggggccggcgccggcggcg 188
             |||||||||||||||||||
Sbjct: 25282 ggggccggcgccggcggcg 25300
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>gb|AC004059.2|AC004059 Homo sapiens chromosome 4 clone B266E3 map 4q25, complete sequence
          Length = 65201

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 57    tccccaaatccctcccctt 75
             |||||||||||||||||||
Sbjct: 10978 tccccaaatccctcccctt 10960
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>dbj|AP003049.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-10A7, complete
             sequence
          Length = 117001

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 53    attctccccaaatccctcccctt 75
             |||||||||||||||||| ||||
Sbjct: 48251 attctccccaaatccctctcctt 48273
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>gb|AC139099.2| Homo sapiens chromosome 17, clone G549, complete sequence
          Length = 125104

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 47     gccccaattctccccaaatccct 69
              |||||||||||||||| ||||||
Sbjct: 115165 gccccaattctccccacatccct 115143
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>emb|AL365314.16| Mouse DNA sequence from clone RP23-106N23 on chromosome 1, complete
             sequence
          Length = 182054

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 137   cctgcttgacctggccacgggcg 159
             |||||||||||||||||| ||||
Sbjct: 31580 cctgcttgacctggccactggcg 31558


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,758,305
Number of Sequences: 3902068
Number of extensions: 1758305
Number of successful extensions: 170244
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 167854
Number of HSP's gapped (non-prelim): 2389
length of query: 193
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 171
effective length of database: 17,147,199,772
effective search space: 2932171161012
effective search space used: 2932171161012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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