ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl27h09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue Length = 2682 Score = 799 bits (403), Expect = 0.0 Identities = 411/414 (99%) Strand = Plus / Plus Query: 30 gagtgaagcggccggcgacgatgcgcaagtgggcgctctcctgcgcgctcctcctcgtcc 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28 gagtgaagcggccggcgacgatgcgcaagtgggcgctctcctgcgcgctcctcctcgtcc 87 Query: 90 tcctcctcaccaccctccccgatccagctaagaagctccaagtcaatgccgaggagagca 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 tcctcctcaccaccctccccgatccagctaagaagctccaagtcaatgccgaggagagca 147 Query: 150 gcgacgaggttggcgattttcccaaggtagaggagaagcttggggccgtgccccatggct 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 gcgacgaggttggcgattttcccaaggtagaggagaagcttggggccgtgccccatggct 207 Query: 210 tgtccaccgactccgaggttgtccagagggagtccgagtcgatctcgaggaagaccctca 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 tgtccaccgactccgaggttgtccagagggagtccgagtcgatctcgaggaagaccctca 267 Query: 270 ggaactcggccgagaagtttgagttccaggccgaggtgtccaggctcatggacatcatca 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 ggaactcggccgagaagtttgagttccaggccgaggtgtccaggctcatggacatcatca 327 Query: 330 tcaactcactctacagcaacaaggacatcttcctgagggagctcattttcaatgcatctg 389 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 328 tcaactcactctacagcaacaaggacatcttcctgagggagctcatttccaatgcatctg 387 Query: 390 atgctttggancagattaggttccttgccctcaccgataaggaggttatgggtg 443 |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 atgctttggacaagattaggttccttgccctcaccgataaggaggttatgggtg 441 Score = 63.9 bits (32), Expect = 4e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 2 cactcaccagttttggttgcagcaggcagagt 33 |||||||||||||||||||||||||||||||| Sbjct: 32 cactcaccagttttggttgcagcaggcagagt 1
>dbj|AB037681.1| Oryza sativa HSP90 mRNA for heat shock protein 90, complete cds Length = 2731 Score = 408 bits (206), Expect = e-111 Identities = 348/395 (88%), Gaps = 3/395 (0%) Strand = Plus / Plus Query: 47 acgatgcgcaagtgggcgctctcctgcgcgctcctcctcgtcctcctcctcaccaccctc 106 ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 78 acgatgcgcaagtgggcgctctcctccgcgctcctcctc---ctcctcctcaccacactc 134 Query: 107 cccgatccagctaagaagctccaagtcaatgccgaggagagcagcgacgaggttggcgat 166 |||||||||||||||||||||||||||||||| || || |||| || ||| | | ||| Sbjct: 135 cccgatccagctaagaagctccaagtcaatgctgatgacagcactgatgagttagttgat 194 Query: 167 tttcccaaggtagaggagaagcttggggccgtgccccatggcttgtccaccgactccgag 226 || ||||||||||||||| |||| | || ||||||||| ||||||| ||||| ||| Sbjct: 195 ccgccgaaggtagaggagaagattggtggtgttccccatggcctgtccacggactctgag 254 Query: 227 gttgtccagagggagtccgagtcgatctcgaggaagaccctcaggaactcggccgagaag 286 ||||| ||||||||| | ||||| |||||||||||||||||||||| ||| || ||||| Sbjct: 255 gttgttcagagggaggctgagtcaatctcgaggaagaccctcaggagctcagcggagaaa 314 Query: 287 tttgagttccaggccgaggtgtccaggctcatggacatcatcatcaactcactctacagc 346 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 315 tttgagttccaggctgaggtgtccagactcatggacatcatcatcaactcactctacagc 374 Query: 347 aacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttggancagatt 406 ||||||||||| ||||||||||||||||| | |||||| |||||||||||||| ||||| Sbjct: 375 aacaaggacattttcctgagggagctcatctccaatgcttctgatgctttggacaagatt 434 Query: 407 aggttccttgccctcaccgataaggaggttatggg 441 |||||||| || ||||| |||||||||||| |||| Sbjct: 435 aggttcctggctctcactgataaggaggttttggg 469
>dbj|AK102478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094I10, full insert sequence Length = 2708 Score = 406 bits (205), Expect = e-110 Identities = 350/398 (87%), Gaps = 3/398 (0%) Strand = Plus / Plus Query: 47 acgatgcgcaagtgggcgctctcctgcgcgctcctcctcgtcctcctcctc---accacc 103 ||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||| Sbjct: 78 acgatgcgcaagtgggcgctctcctccgcgctcctcctcctcctcctcctcctcaccaca 137 Query: 104 ctccccgatccagctaagaagctccaagtcaatgccgaggagagcagcgacgaggttggc 163 ||||||||||||||||||||||||||||||||||| || || |||| || ||| | | Sbjct: 138 ctccccgatccagctaagaagctccaagtcaatgctgatgacagcactgatgagttagtt 197 Query: 164 gattttcccaaggtagaggagaagcttggggccgtgccccatggcttgtccaccgactcc 223 ||| || ||||||||||||||| |||| | || ||||||||| ||||||| ||||| Sbjct: 198 gatccgccgaaggtagaggagaagattggtggtgttccccatggcctgtccacggactct 257 Query: 224 gaggttgtccagagggagtccgagtcgatctcgaggaagaccctcaggaactcggccgag 283 |||||||| ||||||||| | ||||| |||||||||||||||||||||| ||| || ||| Sbjct: 258 gaggttgttcagagggaggctgagtcaatctcgaggaagaccctcaggagctcagcggag 317 Query: 284 aagtttgagttccaggccgaggtgtccaggctcatggacatcatcatcaactcactctac 343 || |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 318 aaatttgagttccaggctgaggtgtccagactcatggacatcatcatcaactcactctac 377 Query: 344 agcaacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttggancag 403 |||||||||||||| ||||||||||||||||| | |||||| |||||||||||||| || Sbjct: 378 agcaacaaggacattttcctgagggagctcatctccaatgcttctgatgctttggacaag 437 Query: 404 attaggttccttgccctcaccgataaggaggttatggg 441 ||||||||||| || ||||| |||||||||||| |||| Sbjct: 438 attaggttcctggctctcactgataaggaggttttggg 475
>dbj|AK063385.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-G08, full insert sequence Length = 1577 Score = 406 bits (205), Expect = e-110 Identities = 350/398 (87%), Gaps = 3/398 (0%) Strand = Plus / Plus Query: 47 acgatgcgcaagtgggcgctctcctgcgcgctcctcctcgtcctcctcctc---accacc 103 ||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||| Sbjct: 74 acgatgcgcaagtgggcgctctcctccgcgctcctcctcctcctcctcctcctcaccaca 133 Query: 104 ctccccgatccagctaagaagctccaagtcaatgccgaggagagcagcgacgaggttggc 163 ||||||||||||||||||||||||||||||||||| || || |||| || ||| | | Sbjct: 134 ctccccgatccagctaagaagctccaagtcaatgctgatgacagcactgatgagttagtt 193 Query: 164 gattttcccaaggtagaggagaagcttggggccgtgccccatggcttgtccaccgactcc 223 ||| || ||||||||||||||| |||| | || ||||||||| ||||||| ||||| Sbjct: 194 gatccgccgaaggtagaggagaagattggtggtgttccccatggcctgtccacggactct 253 Query: 224 gaggttgtccagagggagtccgagtcgatctcgaggaagaccctcaggaactcggccgag 283 |||||||| ||||||||| | ||||| |||||||||||||||||||||| ||| || ||| Sbjct: 254 gaggttgttcagagggaggctgagtcaatctcgaggaagaccctcaggagctcagcggag 313 Query: 284 aagtttgagttccaggccgaggtgtccaggctcatggacatcatcatcaactcactctac 343 || |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 314 aaatttgagttccaggctgaggtgtccagactcatggacatcatcatcaactcactctac 373 Query: 344 agcaacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttggancag 403 |||||||||||||| ||||||||||||||||| | |||||| |||||||||||||| || Sbjct: 374 agcaacaaggacattttcctgagggagctcatctccaatgcttctgatgctttggacaag 433 Query: 404 attaggttccttgccctcaccgataaggaggttatggg 441 ||||||||||| || ||||| |||||||||||| |||| Sbjct: 434 attaggttcctggctctcactgataaggaggttttggg 471
>gb|AY103537.1| Zea mays PCO098403 mRNA sequence Length = 2806 Score = 299 bits (151), Expect = 4e-78 Identities = 243/274 (88%) Strand = Plus / Plus Query: 170 cccaaggtagaggagaagcttggggccgtgccccatggcttgtccaccgactccgaggtt 229 ||||||||||||||||||||||| || || || |||||| ||||||||||||| |||||| Sbjct: 196 cccaaggtagaggagaagcttggtgctgtccctcatggcctgtccaccgactctgaggtt 255 Query: 230 gtccagagggagtccgagtcgatctcgaggaagaccctcaggaactcggccgagaagttt 289 | ||||||||| | ||||| ||||| |||||||| ||||||| ||| |||||||||||| Sbjct: 256 gcccagagggaagctgagtctatctctaggaagactctcaggagctcagccgagaagttt 315 Query: 290 gagttccaggccgaggtgtccaggctcatggacatcatcatcaactcactctacagcaac 349 ||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 316 gagttccaggctgaggtttccagactcatggacatcatcatcaactcactctacagcaac 375 Query: 350 aaggacatcttcctgagggagctcattttcaatgcatctgatgctttggancagattagg 409 ||||| |||||||||||||||||||| | |||||| |||||||| ||||| |||| ||| Sbjct: 376 aaggatatcttcctgagggagctcatatccaatgcctctgatgcattggataagatcagg 435 Query: 410 ttccttgccctcaccgataaggaggttatgggtg 443 |||||| |||| || |||||||| ||| |||||| Sbjct: 436 ttcctttcccttactgataaggaagttctgggtg 469 Score = 157 bits (79), Expect = 4e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 43 ggcgacgatgcgcaagtgggcgctctcctgcgcgctcctcctcgtcctcctcctcaccac 102 ||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||| Sbjct: 69 ggcgacgatgcgcaagtgggcgctctcctccgcgctcctccttctcttcctcctcaccac 128 Query: 103 cctccccgatccagctaagaagctccaagtcaatgccgaggagagcagcga 153 ||||||||| |||||||||||||| || || |||||||||||||||||||| Sbjct: 129 cctccccgacccagctaagaagctacaggtgaatgccgaggagagcagcga 179
>gb|BT024056.1| Zea mays clone EL01N0440A11 mRNA sequence Length = 2511 Score = 230 bits (116), Expect = 3e-57 Identities = 202/231 (87%) Strand = Plus / Plus Query: 213 ccaccgactccgaggttgtccagagggagtccgagtcgatctcgaggaagaccctcagga 272 |||||||||| ||||||| ||||||||| | ||||| ||||| |||||||| || |||| Sbjct: 9 ccaccgactctgaggttgcccagagggaagctgagtctatctctaggaagactcttagga 68 Query: 273 actcggccgagaagtttgagttccaggccgaggtgtccaggctcatggacatcatcatca 332 ||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 69 gctccgccgagaagtttgagttccaggctgaggtgtccagactcatggacatcatcatca 128 Query: 333 actcactctacagcaacaaggacatcttcctgagggagctcattttcaatgcatctgatg 392 |||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| Sbjct: 129 actcactctacagcaacaaggatatcttcctgagggagctcgggggcaatgcctctgatg 188 Query: 393 ctttggancagattaggttccttgccctcaccgataaggaggttatgggtg 443 | ||||| |||| ||||||||| |||| || |||||||| ||| |||||| Sbjct: 189 cattggataagatcaggttcctttcccttactgataaggaagttctgggtg 239
>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete sequence Length = 143507 Score = 208 bits (105), Expect = 1e-50 Identities = 144/157 (91%) Strand = Plus / Minus Query: 236 agggagtccgagtcgatctcgaggaagaccctcaggaactcggccgagaagtttgagttc 295 |||||| | ||||| |||||||||||||||||||||| ||| || ||||| ||||||||| Sbjct: 14191 agggaggctgagtcaatctcgaggaagaccctcaggagctcagcggagaaatttgagttc 14132 Query: 296 caggccgaggtgtccaggctcatggacatcatcatcaactcactctacagcaacaaggac 355 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 14131 caggctgaggtgtccagactcatggacatcatcatcaactcactctacagcaacaaggac 14072 Query: 356 atcttcctgagggagctcattttcaatgcatctgatg 392 || ||||||||||||||||| | |||||| ||||||| Sbjct: 14071 attttcctgagggagctcatctccaatgcttctgatg 14035 Score = 93.7 bits (47), Expect = 5e-16 Identities = 67/73 (91%), Gaps = 3/73 (4%) Strand = Plus / Minus Query: 47 acgatgcgcaagtgggcgctctcctgcgcgctcctcctcgt---cctcctcctcaccacc 103 ||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| Sbjct: 15169 acgatgcgcaagtgggcgctctcctccgcgctcctcctcctcctcctcctcctcaccaca 15110 Query: 104 ctccccgatccag 116 ||||||||||||| Sbjct: 15109 ctccccgatccag 15097 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 114 cagctaagaagctccaagtcaatgccgaggagagcagcgacgaggttggcgattttccca 173 ||||||||||||||||||||||||| || || |||| || ||| | | ||| || | Sbjct: 14398 cagctaagaagctccaagtcaatgctgatgacagcactgatgagttagttgatccgccga 14339 Query: 174 aggtagaggagaagcttggggccgtgccccatggcttgtccaccgactccgaggttgtcc 233 |||||||||||||| |||| | || ||||||||| ||||||| ||||| |||||||| | Sbjct: 14338 aggtagaggagaagattggtggtgttccccatggcctgtccacggactctgaggttgttc 14279 Query: 234 agagg 238 ||||| Sbjct: 14278 agagg 14274 Score = 54.0 bits (27), Expect = 4e-04 Identities = 44/50 (88%) Strand = Plus / Minus Query: 392 gctttggancagattaggttccttgccctcaccgataaggaggttatggg 441 |||||||| ||||||||||||| || ||||| |||||||||||| |||| Sbjct: 13490 gctttggacaagattaggttcctggctctcactgataaggaggttttggg 13441 Score = 40.1 bits (20), Expect = 6.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcaccaccctccc 108 ||||||||| ||||||||||| |||||||||| Sbjct: 39240 ctcctcctcctcctcctcctc-ccaccctccc 39210
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 208 bits (105), Expect = 1e-50 Identities = 144/157 (91%) Strand = Plus / Minus Query: 236 agggagtccgagtcgatctcgaggaagaccctcaggaactcggccgagaagtttgagttc 295 |||||| | ||||| |||||||||||||||||||||| ||| || ||||| ||||||||| Sbjct: 29933485 agggaggctgagtcaatctcgaggaagaccctcaggagctcagcggagaaatttgagttc 29933426 Query: 296 caggccgaggtgtccaggctcatggacatcatcatcaactcactctacagcaacaaggac 355 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 29933425 caggctgaggtgtccagactcatggacatcatcatcaactcactctacagcaacaaggac 29933366 Query: 356 atcttcctgagggagctcattttcaatgcatctgatg 392 || ||||||||||||||||| | |||||| ||||||| Sbjct: 29933365 attttcctgagggagctcatctccaatgcttctgatg 29933329 Score = 93.7 bits (47), Expect = 5e-16 Identities = 67/73 (91%), Gaps = 3/73 (4%) Strand = Plus / Minus Query: 47 acgatgcgcaagtgggcgctctcctgcgcgctcctcctcgtcc---tcctcctcaccacc 103 ||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||| Sbjct: 29934463 acgatgcgcaagtgggcgctctcctccgcgctcctcctcctcctcctcctcctcaccaca 29934404 Query: 104 ctccccgatccag 116 ||||||||||||| Sbjct: 29934403 ctccccgatccag 29934391 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 114 cagctaagaagctccaagtcaatgccgaggagagcagcgacgaggttggcgattttccca 173 ||||||||||||||||||||||||| || || |||| || ||| | | ||| || | Sbjct: 29933692 cagctaagaagctccaagtcaatgctgatgacagcactgatgagttagttgatccgccga 29933633 Query: 174 aggtagaggagaagcttggggccgtgccccatggcttgtccaccgactccgaggttgtcc 233 |||||||||||||| |||| | || ||||||||| ||||||| ||||| |||||||| | Sbjct: 29933632 aggtagaggagaagattggtggtgttccccatggcctgtccacggactctgaggttgttc 29933573 Query: 234 agagg 238 ||||| Sbjct: 29933572 agagg 29933568 Score = 54.0 bits (27), Expect = 4e-04 Identities = 44/50 (88%) Strand = Plus / Minus Query: 392 gctttggancagattaggttccttgccctcaccgataaggaggttatggg 441 |||||||| ||||||||||||| || ||||| |||||||||||| |||| Sbjct: 29932784 gctttggacaagattaggttcctggctctcactgataaggaggttttggg 29932735 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgcgctcctcctcgtcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 8803120 cgcgctcctcctcctcctcctcctc 8803144 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 5541312 ctcctcctcgtcctcctcctc 5541332 Score = 40.1 bits (20), Expect = 6.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcaccaccctccc 108 ||||||||| ||||||||||| |||||||||| Sbjct: 29958543 ctcctcctcctcctcctcctc-ccaccctccc 29958513
>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541C02 Length = 150660 Score = 208 bits (105), Expect = 1e-50 Identities = 144/157 (91%) Strand = Plus / Minus Query: 236 agggagtccgagtcgatctcgaggaagaccctcaggaactcggccgagaagtttgagttc 295 |||||| | ||||| |||||||||||||||||||||| ||| || ||||| ||||||||| Sbjct: 9633 agggaggctgagtcaatctcgaggaagaccctcaggagctcagcggagaaatttgagttc 9574 Query: 296 caggccgaggtgtccaggctcatggacatcatcatcaactcactctacagcaacaaggac 355 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9573 caggctgaggtgtccagactcatggacatcatcatcaactcactctacagcaacaaggac 9514 Query: 356 atcttcctgagggagctcattttcaatgcatctgatg 392 || ||||||||||||||||| | |||||| ||||||| Sbjct: 9513 attttcctgagggagctcatctccaatgcttctgatg 9477 Score = 93.7 bits (47), Expect = 5e-16 Identities = 67/73 (91%), Gaps = 3/73 (4%) Strand = Plus / Minus Query: 47 acgatgcgcaagtgggcgctctcctgcgcgctcctcctcgtcc---tcctcctcaccacc 103 ||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||| Sbjct: 10611 acgatgcgcaagtgggcgctctcctccgcgctcctcctcctcctcctcctcctcaccaca 10552 Query: 104 ctccccgatccag 116 ||||||||||||| Sbjct: 10551 ctccccgatccag 10539 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 114 cagctaagaagctccaagtcaatgccgaggagagcagcgacgaggttggcgattttccca 173 ||||||||||||||||||||||||| || || |||| || ||| | | ||| || | Sbjct: 9840 cagctaagaagctccaagtcaatgctgatgacagcactgatgagttagttgatccgccga 9781 Query: 174 aggtagaggagaagcttggggccgtgccccatggcttgtccaccgactccgaggttgtcc 233 |||||||||||||| |||| | || ||||||||| ||||||| ||||| |||||||| | Sbjct: 9780 aggtagaggagaagattggtggtgttccccatggcctgtccacggactctgaggttgttc 9721 Query: 234 agagg 238 ||||| Sbjct: 9720 agagg 9716 Score = 54.0 bits (27), Expect = 4e-04 Identities = 44/50 (88%) Strand = Plus / Minus Query: 392 gctttggancagattaggttccttgccctcaccgataaggaggttatggg 441 |||||||| ||||||||||||| || ||||| |||||||||||| |||| Sbjct: 8932 gctttggacaagattaggttcctggctctcactgataaggaggttttggg 8883 Score = 40.1 bits (20), Expect = 6.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcaccaccctccc 108 ||||||||| ||||||||||| |||||||||| Sbjct: 34691 ctcctcctcctcctcctcctc-ccaccctccc 34661
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 208 bits (105), Expect = 1e-50 Identities = 144/157 (91%) Strand = Plus / Minus Query: 236 agggagtccgagtcgatctcgaggaagaccctcaggaactcggccgagaagtttgagttc 295 |||||| | ||||| |||||||||||||||||||||| ||| || ||||| ||||||||| Sbjct: 128998 agggaggctgagtcaatctcgaggaagaccctcaggagctcagcggagaaatttgagttc 128939 Query: 296 caggccgaggtgtccaggctcatggacatcatcatcaactcactctacagcaacaaggac 355 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 128938 caggctgaggtgtccagactcatggacatcatcatcaactcactctacagcaacaaggac 128879 Query: 356 atcttcctgagggagctcattttcaatgcatctgatg 392 || ||||||||||||||||| | |||||| ||||||| Sbjct: 128878 attttcctgagggagctcatctccaatgcttctgatg 128842 Score = 93.7 bits (47), Expect = 5e-16 Identities = 67/73 (91%), Gaps = 3/73 (4%) Strand = Plus / Minus Query: 47 acgatgcgcaagtgggcgctctcctgcgcgctcctcctcg---tcctcctcctcaccacc 103 ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 129976 acgatgcgcaagtgggcgctctcctccgcgctcctcctcctcctcctcctcctcaccaca 129917 Query: 104 ctccccgatccag 116 ||||||||||||| Sbjct: 129916 ctccccgatccag 129904 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 114 cagctaagaagctccaagtcaatgccgaggagagcagcgacgaggttggcgattttccca 173 ||||||||||||||||||||||||| || || |||| || ||| | | ||| || | Sbjct: 129205 cagctaagaagctccaagtcaatgctgatgacagcactgatgagttagttgatccgccga 129146 Query: 174 aggtagaggagaagcttggggccgtgccccatggcttgtccaccgactccgaggttgtcc 233 |||||||||||||| |||| | || ||||||||| ||||||| ||||| |||||||| | Sbjct: 129145 aggtagaggagaagattggtggtgttccccatggcctgtccacggactctgaggttgttc 129086 Query: 234 agagg 238 ||||| Sbjct: 129085 agagg 129081 Score = 54.0 bits (27), Expect = 4e-04 Identities = 44/50 (88%) Strand = Plus / Minus Query: 392 gctttggancagattaggttccttgccctcaccgataaggaggttatggg 441 |||||||| ||||||||||||| || ||||| |||||||||||| |||| Sbjct: 128297 gctttggacaagattaggttcctggctctcactgataaggaggttttggg 128248 Score = 40.1 bits (20), Expect = 6.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcaccaccctccc 108 ||||||||| ||||||||||| |||||||||| Sbjct: 154056 ctcctcctcctcctcctcctc-ccaccctccc 154026
>gb|AF544993.1| Xerophyta viscosa Grp94 mRNA, complete cds Length = 2947 Score = 121 bits (61), Expect = 2e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 312 ggctcatggacatcatcatcaactcactctacagcaacaaggacatcttcctgagggagc 371 |||| ||||| |||||||||||||| |||||||| |||||||| |||||||| || |||| Sbjct: 275 ggctaatggatatcatcatcaactcgctctacagtaacaaggatatcttccttagagagc 334 Query: 372 tcattttcaatgcatctgatgctttggancagattaggttccttgccctcaccgataagg 431 |||| | |||||| |||||||||||||| |||| ||||||||| |||| || ||||||| Sbjct: 335 tcatctccaatgcgtctgatgctttggataagataaggttcctttcccttactgataagg 394 Query: 432 aggt 435 |||| Sbjct: 395 aggt 398
>ref|NM_118552.2| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein binding AT4G24190 (SHD) transcript variant AT4G24190.1 mRNA, complete cds Length = 2707 Score = 87.7 bits (44), Expect = 3e-14 Identities = 118/143 (82%) Strand = Plus / Plus Query: 281 gagaagtttgagttccaggccgaggtgtccaggctcatggacatcatcatcaactcactc 340 ||||||||||||||||| || ||||| || |||| |||||||| || |||||||| || Sbjct: 283 gagaagtttgagttccaagctgaggtttctcggcttatggacattattatcaactctcta 342 Query: 341 tacagcaacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttggan 400 ||||| ||||||||||| ||| | || ||| | || | |||||| |||||||| ||||| Sbjct: 343 tacagtaacaaggacattttcttaagagagttgatctccaatgcttctgatgccttggac 402 Query: 401 cagattaggttccttgccctcac 423 | |||||||||||||| ||||| Sbjct: 403 aaaattaggttccttgcactcac 425
>ref|NM_202877.1| Arabidopsis thaliana SHD (SHEPHERD); ATP binding / unfolded protein binding AT4G24190 (SHD) transcript variant AT4G24190.2 mRNA, complete cds Length = 2707 Score = 87.7 bits (44), Expect = 3e-14 Identities = 118/143 (82%) Strand = Plus / Plus Query: 281 gagaagtttgagttccaggccgaggtgtccaggctcatggacatcatcatcaactcactc 340 ||||||||||||||||| || ||||| || |||| |||||||| || |||||||| || Sbjct: 283 gagaagtttgagttccaagctgaggtttctcggcttatggacattattatcaactctcta 342 Query: 341 tacagcaacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttggan 400 ||||| ||||||||||| ||| | || ||| | || | |||||| |||||||| ||||| Sbjct: 343 tacagtaacaaggacattttcttaagagagttgatctccaatgcttctgatgccttggac 402 Query: 401 cagattaggttccttgccctcac 423 | |||||||||||||| ||||| Sbjct: 403 aaaattaggttccttgcactcac 425
>dbj|AK221485.1| Arabidopsis thaliana mRNA for HSP90-like protein, partial cds, clone: RAFL07-47-H07 Length = 1038 Score = 87.7 bits (44), Expect = 3e-14 Identities = 118/143 (82%) Strand = Plus / Plus Query: 281 gagaagtttgagttccaggccgaggtgtccaggctcatggacatcatcatcaactcactc 340 ||||||||||||||||| || ||||| || |||| |||||||| || |||||||| || Sbjct: 283 gagaagtttgagttccaagctgaggtttctcggcttatggacattattatcaactctcta 342 Query: 341 tacagcaacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttggan 400 ||||| ||||||||||| ||| | || ||| | || | |||||| |||||||| ||||| Sbjct: 343 tacagtaacaaggacattttcttaagagagttgatctccaatgcttctgatgccttggac 402 Query: 401 cagattaggttccttgccctcac 423 | |||||||||||||| ||||| Sbjct: 403 aaaattaggttccttgcactcac 425
>gb|AY039895.1| Arabidopsis thaliana AT4g24190/T22A6_20 mRNA, complete cds Length = 2702 Score = 87.7 bits (44), Expect = 3e-14 Identities = 118/143 (82%) Strand = Plus / Plus Query: 281 gagaagtttgagttccaggccgaggtgtccaggctcatggacatcatcatcaactcactc 340 ||||||||||||||||| || ||||| || |||| |||||||| || |||||||| || Sbjct: 277 gagaagtttgagttccaagctgaggtttctcggcttatggacattattatcaactctcta 336 Query: 341 tacagcaacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttggan 400 ||||| ||||||||||| ||| | || ||| | || | |||||| |||||||| ||||| Sbjct: 337 tacagtaacaaggacattttcttaagagagttgatctccaatgcttctgatgccttggac 396 Query: 401 cagattaggttccttgccctcac 423 | |||||||||||||| ||||| Sbjct: 397 aaaattaggttccttgcactcac 419
>gb|BT004527.1| Arabidopsis thaliana At4g24190/T22A6_20 gene, complete cds Length = 2472 Score = 87.7 bits (44), Expect = 3e-14 Identities = 118/143 (82%) Strand = Plus / Plus Query: 281 gagaagtttgagttccaggccgaggtgtccaggctcatggacatcatcatcaactcactc 340 ||||||||||||||||| || ||||| || |||| |||||||| || |||||||| || Sbjct: 229 gagaagtttgagttccaagctgaggtttctcggcttatggacattattatcaactctcta 288 Query: 341 tacagcaacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttggan 400 ||||| ||||||||||| ||| | || ||| | || | |||||| |||||||| ||||| Sbjct: 289 tacagtaacaaggacattttcttaagagagttgatctccaatgcttctgatgccttggac 348 Query: 401 cagattaggttccttgccctcac 423 | |||||||||||||| ||||| Sbjct: 349 aaaattaggttccttgcactcac 371
>dbj|AB064528.1| Arabidopsis thaliana SHD mRNA for SHEPHERD, complete cds Length = 2674 Score = 87.7 bits (44), Expect = 3e-14 Identities = 118/143 (82%) Strand = Plus / Plus Query: 281 gagaagtttgagttccaggccgaggtgtccaggctcatggacatcatcatcaactcactc 340 ||||||||||||||||| || ||||| || |||| |||||||| || |||||||| || Sbjct: 269 gagaagtttgagttccaagctgaggtttctcggcttatggacattattatcaactctcta 328 Query: 341 tacagcaacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttggan 400 ||||| ||||||||||| ||| | || ||| | || | |||||| |||||||| ||||| Sbjct: 329 tacagtaacaaggacattttcttaagagagttgatctccaatgcttctgatgccttggac 388 Query: 401 cagattaggttccttgccctcac 423 | |||||||||||||| ||||| Sbjct: 389 aaaattaggttccttgcactcac 411
>dbj|AB196457.1| Oncorhynchus mykiss HSP90BA mRNA for heat shock 90kDa protein 1 beta isoform a, complete cds Length = 2683 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 346 caacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttgga 399 ||||||||| |||||||| |||||| | |||| ||||||||||||||||||||| Sbjct: 156 caacaaggaaatcttcctcagggagttgatttccaatgcatctgatgctttgga 209
>gb|AF135117.1|AF135117 Salmo salar heat shock protein hsp90 beta (hsp90 beta) mRNA, complete cds Length = 2625 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 346 caacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttgga 399 ||||||||| |||||||| |||||| | |||| ||||||||||||||||||||| Sbjct: 184 caacaaggaaatcttcctcagggagttgatttccaatgcatctgatgctttgga 237
>gb|L14594.1|CTRHSP90A Catharanthus roseus heat shock protein 90 mRNA, complete cds Length = 2670 Score = 67.9 bits (34), Expect = 3e-08 Identities = 120/149 (80%) Strand = Plus / Plus Query: 281 gagaagtttgagttccaggccgaggtgtccaggctcatggacatcatcatcaactcactc 340 ||||||||||| |||||||| ||||| || | || ||||| ||||| ||||| || || Sbjct: 237 gagaagtttgaattccaggctgaggtttctcgacttatggatatcattatcaattctctt 296 Query: 341 tacagcaacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttggan 400 ||||| |||||||||||||| |||||||| | || | ||||| || ||||| || || Sbjct: 297 tacagtaacaaggacatctttttgagggagttgatatctaatgcttcggatgcattagac 356 Query: 401 cagattaggttccttgccctcaccgataa 429 ||||||| ||||| |||||||| ||||| Sbjct: 357 aagattagattcctcgccctcactgataa 385
>emb|AL078637.1|ATT22A6 Arabidopsis thaliana DNA chromosome 4, BAC clone T22A6 (ESSA project) Length = 108459 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 281 gagaagtttgagttccaggccgaggtgtccaggctcatggacatcatcatcaactcactc 340 ||||||||||||||||| || ||||| || |||| |||||||| || |||||||| || Sbjct: 6488 gagaagtttgagttccaagctgaggtttctcggcttatggacattattatcaactctcta 6429 Query: 341 tacagcaacaaggacat 357 ||||| ||||||||||| Sbjct: 6428 tacagtaacaaggacat 6412
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61 Length = 198402 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 281 gagaagtttgagttccaggccgaggtgtccaggctcatggacatcatcatcaactcactc 340 ||||||||||||||||| || ||||| || |||| |||||||| || |||||||| || Sbjct: 23145 gagaagtttgagttccaagctgaggtttctcggcttatggacattattatcaactctcta 23086 Query: 341 tacagcaacaaggacat 357 ||||| ||||||||||| Sbjct: 23085 tacagtaacaaggacat 23069
>dbj|AB064527.1| Arabidopsis thaliana SHD gene for SHEPHERD, complete cds Length = 6679 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 281 gagaagtttgagttccaggccgaggtgtccaggctcatggacatcatcatcaactcactc 340 ||||||||||||||||| || ||||| || |||| |||||||| || |||||||| || Sbjct: 2003 gagaagtttgagttccaagctgaggtttctcggcttatggacattattatcaactctcta 2062 Query: 341 tacagcaacaaggacat 357 ||||| ||||||||||| Sbjct: 2063 tacagtaacaaggacat 2079
>gb|AY187547.1| Strongylocentrotus purpuratus heat shock protein gp96 mRNA, complete cds Length = 2497 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 324 tcatcatcaactcactctacagcaacaaggacatcttc 361 |||||||||||||||||||||| |||||||| |||||| Sbjct: 303 tcatcatcaactcactctacaggaacaaggagatcttc 340
>ref|NM_214643.1| Strongylocentrotus purpuratus heat shock protein gp96 (Gp96), mRNA Length = 2497 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 324 tcatcatcaactcactctacagcaacaaggacatcttc 361 |||||||||||||||||||||| |||||||| |||||| Sbjct: 303 tcatcatcaactcactctacaggaacaaggagatcttc 340
>gb|AY226086.1| Ephydatia cooperensis 90-kDa heat-shock protein (hsp90) mRNA, partial cds Length = 891 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 347 aacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttgga 399 |||||||| |||| ||||| |||||||||| |||||||||||| |||||||| Sbjct: 46 aacaaggaagtctttctgagagagctcatttccaatgcatctgacgctttgga 98
>gb|BC060352.1| Xenopus laevis hypothetical protein MGC68448, mRNA (cDNA clone MGC:68448 IMAGE:3396928), complete cds Length = 3042 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgagggagctcattttcaatgca 385 ||||||||||| || |||| ||||| || |||||||| ||||| || |||| ||||||| Sbjct: 322 atcatcaactctctttacaaaaacaaagagatcttcctaagggaacttatttccaatgca 381 Query: 386 tctgatgct 394 ||||||||| Sbjct: 382 tctgatgct 390
>emb|AJ937770.1| Uncultured gamma proteobacterium fosmid clone b3cf1.2.d07 Length = 33938 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 333 actcactctacagcaacaaggacatcttcctgagggagctcattt 377 |||||||||||||||||||||| || |||||| ||||||| |||| Sbjct: 7313 actcactctacagcaacaaggaaatattcctgcgggagctgattt 7357
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 333 actcactctacagcaacaaggacatcttcctgagggagctcat 375 |||| |||||| ||||||||||||||||||| |||||||||| Sbjct: 2620739 actccctctactccaacaaggacatcttcctgcgggagctcat 2620781
>ref|XR_004086.1| PREDICTED: Mus musculus similar to heat shock protein 90kDa alpha (cytosolic), class A member 1 isoform 1 (LOC672982), mRNA Length = 1316 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 346 caacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttgga 399 |||||| || ||||| |||||| ||||||||| |||| ||||||||||| |||| Sbjct: 161 caacaaagagatctttctgaggaagctcatttccaattcatctgatgctctgga 214
>ref|XR_004637.1| PREDICTED: Mus musculus hypothetical LOC622146 (LOC622146), mRNA Length = 1315 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 346 caacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttgga 399 |||||| || ||||| |||||| ||||||||| |||| ||||||||||| |||| Sbjct: 161 caacaaagagatctttctgaggaagctcatttccaattcatctgatgctctgga 214
>gb|AC121854.2| Mus musculus BAC clone RP24-97A15 from 7, complete sequence Length = 185164 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 346 caacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttgga 399 |||||| || ||||| |||||| ||||||||| |||| ||||||||||| |||| Sbjct: 76454 caacaaagagatctttctgaggaagctcatttccaattcatctgatgctctgga 76507
>dbj|AB196458.1| Oncorhynchus mykiss HSP90BB mRNA for heat shock 90kDa protein 1 beta isoform b, complete cds Length = 2694 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 346 caacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttgga 399 ||||||||| |||||||| |||||| | || | |||||| |||||||||||||| Sbjct: 149 caacaaggagatcttccttagggagttgatctccaatgcctctgatgctttgga 202
>gb|AY104718.1| Zea mays PCO153543 mRNA sequence Length = 847 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 324 tcatcatcaactcactctacagcaacaaggacatcttcctgagggagctcattt 377 ||||||||||| | ||||| ||||||||| |||||||| ||||||||||||| Sbjct: 190 tcatcatcaacaccttctactccaacaaggagatcttccttagggagctcattt 243
>gb|AY187545.1| Xenopus laevis heat shock protein gp96 mRNA, complete cds Length = 2552 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgagggagctcattttcaatgca 385 ||||||||||| || |||| ||||| || |||||||| || || || |||| ||||||| Sbjct: 265 atcatcaactctctttacaaaaacaaagagatcttccttagagaactaatttccaatgca 324 Query: 386 tctgatgct 394 ||||||||| Sbjct: 325 tctgatgct 333
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 75 cgctcctcctcgtcctcctcctcaccacc 103 ||||||||||| ||||||||||||||||| Sbjct: 17012707 cgctcctcctcctcctcctcctcaccacc 17012735 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 8140520 ctcctcctcgtcctcctcctc 8140500
>ref|NM_213973.1| Sus scrofa 90-kDa heat shock protein (HSP90), mRNA Length = 2456 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 347 aacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttgga 399 |||||||| ||||| |||||||||||||||| ||| | || ||||||||||| Sbjct: 142 aacaaggagatctttctgagggagctcatttccaactcgtccgatgctttgga 194
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 75 cgctcctcctcgtcctcctcctcaccacc 103 ||||||||||| ||||||||||||||||| Sbjct: 142520 cgctcctcctcctcctcctcctcaccacc 142548
>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0025H07 Length = 145605 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 75 cgctcctcctcgtcctcctcctcaccacc 103 ||||||||||| ||||||||||||||||| Sbjct: 6366 cgctcctcctcctcctcctcctcaccacc 6394
>dbj|AK121117.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074A22, full insert sequence Length = 2175 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 75 cgctcctcctcgtcctcctcctcaccacc 103 ||||||||||| ||||||||||||||||| Sbjct: 171 cgctcctcctcctcctcctcctcaccacc 143
>dbj|AK101045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033005H20, full insert sequence Length = 2170 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 75 cgctcctcctcgtcctcctcctcaccacc 103 ||||||||||| ||||||||||||||||| Sbjct: 166 cgctcctcctcctcctcctcctcaccacc 138
>gb|U94395.1|SSU94395 Sus scrofa 90-kDa heat shock protein (hsp90) mRNA, complete cds Length = 2456 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 347 aacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttgga 399 |||||||| ||||| |||||||||||||||| ||| | || ||||||||||| Sbjct: 142 aacaaggagatctttctgagggagctcatttccaactcgtccgatgctttgga 194
>ref|NM_195736.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0008A05.5), mRNA Length = 330 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcacc 100 |||||||||||||||||||||||| Sbjct: 25 ctcctcctcgtcctcctcctcacc 48
>gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029K08, complete sequence Length = 136687 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 70 ctgcgcgctcctcctcgtcctcctcctc 97 |||| ||||||||||||||||||||||| Sbjct: 69743 ctgcacgctcctcctcgtcctcctcctc 69716
>emb|X70101.1|GGHSP90B G.gallus hsp 90 beta mRNA for heat shock protein 90 beta Length = 2633 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 324 tcatcatcaactcactctacagcaacaaggacatcttcctgagggagctcat 375 ||||||||||| | ||||| ||||||||| ||||||||| |||||||||| Sbjct: 80 tcatcatcaacacgttctactccaacaaggagatcttcctgcgggagctcat 131
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16 Length = 347786 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 333 actcactctacagcaacaaggacatcttcctg 364 |||| ||||||||||||||||| ||||||||| Sbjct: 183762 actctctctacagcaacaaggagatcttcctg 183793
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14 Length = 349146 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 333 actcactctacagcaacaaggacatcttcctg 364 |||| ||||||||||||||||| ||||||||| Sbjct: 181515 actctctctacagcaacaaggagatcttcctg 181546
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 333 actcactctacagcaacaaggacatcttcctg 364 |||| ||||||||||||||||| ||||||||| Sbjct: 71719 actctctctacagcaacaaggagatcttcctg 71750
>emb|AL662815.13| Mouse DNA sequence from clone RP23-361M22 on chromosome 1 Contains part of the gene for ortholog of human amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 19 (ALS2CR19) and a novel gene, complete sequence Length = 155204 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcaccaccc 104 ||||||||||||||||||||| |||||| Sbjct: 151041 ctcctcctcgtcctcctcctccccaccc 151068
>ref|NM_206959.1| Gallus gallus heat shock 90kDa protein 1, beta (HSPCB), mRNA Length = 2633 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 324 tcatcatcaactcactctacagcaacaaggacatcttcctgagggagctcat 375 ||||||||||| | ||||| ||||||||| ||||||||| |||||||||| Sbjct: 80 tcatcatcaacacgttctactccaacaaggagatcttcctgcgggagctcat 131
>gb|AC099774.6| Oryza sativa chromosome 10 BAC OSJNBa0073L20 genomic sequence, complete sequence Length = 147651 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcacc 100 |||||||||||||||||||||||| Sbjct: 142235 ctcctcctcgtcctcctcctcacc 142212
>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence Length = 116601 Score = 48.1 bits (24), Expect = 0.025 Identities = 90/112 (80%) Strand = Plus / Plus Query: 281 gagaagtttgagttccaggccgaggtgtccaggctcatggacatcatcatcaactcactc 340 |||||||||||||| || || || || || ||||| ||||| || |||||||| || || Sbjct: 75976 gagaagtttgagtttcaagctgaagtttcaaggcttatggatattatcatcaattcgctt 76035 Query: 341 tacagcaacaaggacatcttcctgagggagctcattttcaatgcatctgatg 392 ||||| || ||||| || ||||| ||||| || |||| ||||| ||||||| Sbjct: 76036 tacagtaataaggatattttcctcagggaactgatttcaaatgcttctgatg 76087
>gb|AC091749.8| Oryza sativa chromosome 10 BAC OSJNBb0008A05 genomic sequence, complete sequence Length = 150465 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcacc 100 |||||||||||||||||||||||| Sbjct: 6666 ctcctcctcgtcctcctcctcacc 6643
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 70 ctgcgcgctcctcctcgtcctcctcctc 97 |||| ||||||||||||||||||||||| Sbjct: 21411993 ctgcacgctcctcctcgtcctcctcctc 21411966 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 22095328 ctcctcctcgtcctcctcctc 22095348 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 5958052 ctcctcctcgtcctcctcctc 5958072 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcacc 100 ||||||||| |||||||||||||| Sbjct: 24653931 ctcctcctcctcctcctcctcacc 24653954 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcacc 100 ||||||||| |||||||||||||| Sbjct: 21917392 ctcctcctcctcctcctcctcacc 21917415 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcacc 100 ||||||||| |||||||||||||| Sbjct: 8878694 ctcctcctcctcctcctcctcacc 8878671
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcacc 100 |||||||||||||||||||||||| Sbjct: 8751594 ctcctcctcgtcctcctcctcacc 8751571 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 19230156 ctcctcctcgtcctcctcctc 19230176 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgcgctcctcctcgtcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 3479600 cgcgctcctcctcctcctcctcctc 3479624
>gb|AY826920.1| Heterocapsa triquetra clone HTHSP1 heat-shock protein, hsp 90 mRNA, partial cds Length = 570 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 281 gagaagtttgagttccaggccgaggtgtccaggctcatggacatcatcatcaactc 336 ||||| |||||||||||||| ||||| || | |||||||||||||| ||||||| Sbjct: 216 gagaactttgagttccaggctgaggtcggcaaggtcatggacatcatcgtcaactc 271
>dbj|AK110745.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-F12, full insert sequence Length = 2441 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 324 tcatcatcaactcactctacagcaacaaggacatcttcctgagggagctcat 375 ||||||||||| | ||||| ||||||||| ||||||||||| |||||||| Sbjct: 181 tcatcatcaacaccgtctactccaacaaggagatcttcctgagagagctcat 232
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcacc 100 |||||||||||||||||||||||| Sbjct: 8756733 ctcctcctcgtcctcctcctcacc 8756710 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 19241432 ctcctcctcgtcctcctcctc 19241452 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgcgctcctcctcgtcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 3479521 cgcgctcctcctcctcctcctcctc 3479545
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 70 ctgcgcgctcctcctcgtcctcctcctc 97 |||| ||||||||||||||||||||||| Sbjct: 21722192 ctgcacgctcctcctcgtcctcctcctc 21722165 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 22405275 ctcctcctcgtcctcctcctc 22405295 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 6024529 ctcctcctcgtcctcctcctc 6024549 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcacc 100 ||||||||| |||||||||||||| Sbjct: 24965601 ctcctcctcctcctcctcctcacc 24965624 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcacc 100 ||||||||| |||||||||||||| Sbjct: 22227591 ctcctcctcctcctcctcctcacc 22227614 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcacc 100 ||||||||| |||||||||||||| Sbjct: 8950357 ctcctcctcctcctcctcctcacc 8950334
>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence Length = 197719 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcaccacc 103 ||||||||| ||||||||||||||||| Sbjct: 45579 ctcctcctcttcctcctcctcaccacc 45605 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tcctcctcgtcctcctcctc 97 |||||||||||||||||||| Sbjct: 170547 tcctcctcgtcctcctcctc 170566
>gb|AC132617.4| Mus musculus BAC clone RP23-230A6 from chromosome 12, complete sequence Length = 239046 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcaccacc 103 ||||||||| ||||||||||||||||| Sbjct: 58396 ctcctcctcctcctcctcctcaccacc 58422
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 338 ctctacagcaacaaggacatcttcctg 364 ||||||||||||||||| ||||||||| Sbjct: 2792706 ctctacagcaacaaggaaatcttcctg 2792680
>gb|AY617733.1| Sterkiella histriomuscorum clone UGC1O0005_F14_F genomic sequence Length = 614 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Plus Query: 305 gtgtccaggctcatggacatcatcatcaactcact 339 |||||||| || ||||| ||||||||||||||||| Sbjct: 498 gtgtccagacttatggatatcatcatcaactcact 532
>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22, complete sequence Length = 173903 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcaccaccctcc 107 ||||||||| ||||||||||||| ||||||| Sbjct: 97654 ctcctcctcctcctcctcctcactaccctcc 97684
>gb|AC164880.3| Mus musculus BAC clone RP23-321G17 from chromosome 7, complete sequence Length = 210387 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 76 gctcctcctcgtcctcctcctcaccaccctc 106 |||||||||| ||||||| |||||||||||| Sbjct: 167050 gctcctcctcctcctcctgctcaccaccctc 167020 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcaccaccctc 106 ||||||||| ||||||| |||||||||||| Sbjct: 167221 ctcctcctcctcctcctgctcaccaccctc 167192
>gb|AC115904.13| Mus musculus chromosome 16, clone RP24-472P22, complete sequence Length = 167938 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcaccacc 103 ||||||||| ||||||||||||||||| Sbjct: 104170 ctcctcctcctcctcctcctcaccacc 104196
>gb|BT025090.1| Drosophila melanogaster IP13374 full insert cDNA Length = 1631 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctg 364 ||||||||||| || ||| |||||||||| ||||||||| Sbjct: 368 atcatcaactcgctttaccgcaacaaggagatcttcctg 406
>gb|AC160137.2| Mus musculus BAC clone RP23-136A1 from chromosome 9, complete sequence Length = 241917 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcaccacc 103 ||||||||| ||||||||||||||||| Sbjct: 188750 ctcctcctcctcctcctcctcaccacc 188724
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcaccaccctcc 107 ||||||||| ||||||||||||| ||||||| Sbjct: 2651134 ctcctcctcctcctcctcctcactaccctcc 2651164 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 27880596 ctcctcctcgtcctcctcctc 27880616
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcaccaccctcc 107 |||||||||| | |||||||||||||||||| Sbjct: 503445 ctcctcctcgccgtcctcctcaccaccctcc 503415 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 cctcctcgtcctcctcctcac 99 ||||||||||||||||||||| Sbjct: 515930 cctcctcgtcctcctcctcac 515950 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cctcctcctcaccaccctcc 107 |||||||||||||||||||| Sbjct: 1114657 cctcctcctcaccaccctcc 1114638
>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105 Length = 340000 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 cctcctcgtcctcctcctcacca 101 ||||||||||||||||||||||| Sbjct: 66161 cctcctcgtcctcctcctcacca 66183
>gb|AC102255.10| Mus musculus chromosome 18, clone RP24-182H11, complete sequence Length = 195275 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcaccacc 103 ||||||||| ||||||||||||||||| Sbjct: 107519 ctcctcctcttcctcctcctcaccacc 107545
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcaccaccctcc 107 |||||||||| | |||||||||||||||||| Sbjct: 153933 ctcctcctcgccgtcctcctcaccaccctcc 153903 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 cctcctcgtcctcctcctcac 99 ||||||||||||||||||||| Sbjct: 166418 cctcctcgtcctcctcctcac 166438 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cctcctcctcaccaccctcc 107 |||||||||||||||||||| Sbjct: 788016 cctcctcctcaccaccctcc 787997
>emb|CT010511.9| Mouse DNA sequence from clone RP23-222I19 on chromosome 14, complete sequence Length = 181740 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcaccacc 103 ||||||||| ||||||||||||||||| Sbjct: 121034 ctcctcctcctcctcctcctcaccacc 121008
>gb|AC151981.3| Mus musculus BAC clone RP24-66K3 from chromosome 12, complete sequence Length = 185710 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcaccacc 103 ||||||||| ||||||||||||||||| Sbjct: 147771 ctcctcctcctcctcctcctcaccacc 147797
>dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:KB43F12, MX1-D21S171 region, complete sequence Length = 158063 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 cctcctcgtcctcctcctcacca 101 ||||||||||||||||||||||| Sbjct: 66161 cctcctcgtcctcctcctcacca 66183
>gb|AY395632.1| Dicentrarchus labrax HSP-90 mRNA, complete cds Length = 2265 Score = 44.1 bits (22), Expect = 0.38 Identities = 46/54 (85%) Strand = Plus / Plus Query: 346 caacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttgga 399 |||||| || |||||||| |||||| | || | |||||| |||||||||||||| Sbjct: 184 caacaaagagatcttcctcagggagttgatctccaatgcctctgatgctttgga 237
>gb|AY662692.1| Sus scrofa 6A3-5 protein mRNA, complete cds Length = 5685 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 3730 ctcctcctcgtcctcctcctca 3709 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 3742 ctcctcctcgtcctcctcctc 3722
>gb|AC147229.5| Mus musculus BAC clone RP23-236E9 from chromosome 19, complete sequence Length = 162400 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 56769 ctcctcctcgtcctcctcctca 56790
>ref|XM_953965.1| Neurospora crassa OR74A hypothetical protein (NCU07545.1) partial mRNA Length = 1074 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcaccaccctc 106 ||||||||| ||||||||||| |||||||| Sbjct: 688 ctcctcctcctcctcctcctccccaccctc 659
>ref|XM_327830.1| Neurospora crassa OR74A hypothetical protein (NCU07545.1) partial mRNA Length = 1074 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcaccaccctc 106 ||||||||| ||||||||||| |||||||| Sbjct: 688 ctcctcctcctcctcctcctccccaccctc 659
>gb|AY226085.1| Suberites fuscus 90-kDa heat-shock protein (hsp90) mRNA, partial cds Length = 1749 Score = 44.1 bits (22), Expect = 0.38 Identities = 43/50 (86%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgagggagctcat 375 ||||||||| || ||||| |||||| || |||||||| ||||||||||| Sbjct: 25 atcatcaacacattctactccaacaaagagatcttccttagggagctcat 74
>gb|AY226082.1| Proterospongia sp. ATCC 50818 90-kDa heat-shock protein (hsp90) mRNA, partial cds Length = 876 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcct 363 ||||||||| || |||||||||||||||| || ||||| Sbjct: 25 atcatcaacacattctacagcaacaaggagattttcct 62
>ref|XM_994810.1| PREDICTED: Mus musculus WD repeat domain 7 (Wdr7), mRNA Length = 7106 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 2539 ctcctcctcgtcctcctcctca 2518
>ref|XM_915908.2| PREDICTED: Mus musculus WD repeat domain 7, transcript variant 5 (Wdr7), mRNA Length = 7115 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 2539 ctcctcctcgtcctcctcctca 2518
>ref|XM_901912.2| PREDICTED: Mus musculus WD repeat domain 7, transcript variant 3 (Wdr7), mRNA Length = 7013 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 2539 ctcctcctcgtcctcctcctca 2518
>ref|XM_140391.5| PREDICTED: Mus musculus WD repeat domain 7, transcript variant 1 (Wdr7), mRNA Length = 7109 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 2539 ctcctcctcgtcctcctcctca 2518
>ref|XM_977812.1| PREDICTED: Mus musculus gene model 1332, (NCBI) (LOC383766), mRNA Length = 666 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 76 gctcctcctcgtcctcctcctcaccaccctcccc 109 |||||||||| |||||||||||||| ||||||| Sbjct: 121 gctcctcctcttcctcctcctcaccctcctcccc 88
>ref|XR_005106.1| PREDICTED: Mus musculus gene model 1332, (NCBI) (LOC383766), mRNA Length = 666 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 76 gctcctcctcgtcctcctcctcaccaccctcccc 109 |||||||||| |||||||||||||| ||||||| Sbjct: 121 gctcctcctcttcctcctcctcaccctcctcccc 88
>ref|XM_357232.3| PREDICTED: Mus musculus gene model 1332, (NCBI) (LOC383766), mRNA Length = 666 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 76 gctcctcctcgtcctcctcctcaccaccctcccc 109 |||||||||| |||||||||||||| ||||||| Sbjct: 121 gctcctcctcttcctcctcctcaccctcctcccc 88
>ref|XM_389599.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09423.1) partial mRNA Length = 1566 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcaccaccctc 106 ||||||||| || ||||||||||||||||| Sbjct: 1383 ctcctcctcctcttcctcctcaccaccctc 1354
>ref|XM_803267.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511481.20) partial mRNA Length = 966 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 726 ctcctcctcgtcctcctcctca 705
>emb|CR686467.1|CNS0FSMN Tetraodon nigroviridis full-length cDNA Length = 1507 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcaccac 102 ||||||||| |||||||||||||||| Sbjct: 779 ctcctcctcctcctcctcctcaccac 804
>gb|AC102132.3| Mus musculus chromosome 18, clone RP23-231D1, complete sequence Length = 183544 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 51188 ctcctcctcgtcctcctcctca 51167
>ref|XM_785529.1| PREDICTED: Strongylocentrotus purpuratus similar to Hormone-sensitive lipase (HSL) (LOC585712), mRNA Length = 1677 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 78 tcctcctcgtcctcctcctcac 99 |||||||||||||||||||||| Sbjct: 1235 tcctcctcgtcctcctcctcac 1214
>emb|AL121756.14|HSDJ726C3 Human DNA sequence from clone RP4-726C3 on chromosome 20 Contains the C20orf185 gene for the possible ortholog of potential ligand_binding protein RYA3 (Rat), the C20orf186 gene for the possible ortholog of potential ligand_binding protein RY2G5 (Rat), the 5' end of the SPAG4L gene for sperm associated antigen 4-like, a novel gene, a FAM16AX (family with sequence similarity 16, member A, X-linked) pseudogene, the BPIL3 gene for bactericidal/permeability-increasing protein-like 3 and a CpG island, complete sequence Length = 129502 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 112765 ctcctcctcgtcctcctcctca 112744
>gb|AC163635.5| Mus musculus BAC clone RP23-183F13 from chromosome 17, complete sequence Length = 185844 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 78 tcctcctcgtcctcctcctcaccacc 103 |||||||| ||||||||||||||||| Sbjct: 73571 tcctcctcctcctcctcctcaccacc 73596
>emb|AL731866.8| Mouse DNA sequence from clone RP23-37F22 on chromosome 11 Contains the 5' end of a variant of the Ccl1 gene for chemokine (C-C motif) ligand 1, complete sequence Length = 105085 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 78 tcctcctcgtcctcctcctcaccacc 103 |||||||| ||||||||||||||||| Sbjct: 71213 tcctcctcctcctcctcctcaccacc 71188
>gb|AC023712.5| Drosophila melanogaster X BAC RP98-1M22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170129 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 78 tcctcctcgtcctcctcctcaccaccctcc 107 |||||||| ||||||||||||||| ||||| Sbjct: 138189 tcctcctcttcctcctcctcaccagcctcc 138160
>gb|AC104606.6| Drosophila melanogaster X BAC RP98-26L11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 183105 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 158901 ctcctcctcgtcctcctcctca 158922
>ref|NM_167130.1| Drosophila melanogaster cut CG11387-RB, transcript variant B (ct), mRNA Length = 2533 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 876 ctcctcctcgtcctcctcctca 855
>dbj|AB040292.1| Mus musculus Mtch1 gene for mitochondiral carrier homolog 1 isoform a and b, complete cds Length = 21984 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 78 tcctcctcgtcctcctcctcaccacc 103 |||||||| ||||||||||||||||| Sbjct: 19675 tcctcctcctcctcctcctcaccacc 19650
>gb|AY095065.1| Drosophila melanogaster RE08418 full insert cDNA Length = 2532 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 875 ctcctcctcgtcctcctcctca 854
>ref|NM_131987.2| Drosophila melanogaster Sas10 CG4202-RA (Sas10), mRNA Length = 1644 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 78 tcctcctcgtcctcctcctcaccaccctcc 107 |||||||| ||||||||||||||| ||||| Sbjct: 1136 tcctcctcttcctcctcctcaccagcctcc 1107
>ref|NM_080025.1| Drosophila melanogaster cut CG11387-RA, transcript variant A (ct), mRNA Length = 8202 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 1120 ctcctcctcgtcctcctcctca 1099
>gb|AF473560.1| Coturnix japonica heat shock protein 90 alpha mRNA, partial cds Length = 695 Score = 44.1 bits (22), Expect = 0.38 Identities = 46/54 (85%) Strand = Plus / Plus Query: 346 caacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttgga 399 ||||||||| || ||| ||||||| || |||| |||| ||||||||||| |||| Sbjct: 118 caacaaggaaattttcttgagggaactgatttccaattcatctgatgctctgga 171
>dbj|AK154451.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630035B14 product:WD repeat domain 7, full insert sequence Length = 6993 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 2519 ctcctcctcgtcctcctcctca 2498
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 347 aacaaggacatcttcctgagggagct 372 |||||||||||||||||| ||||||| Sbjct: 281349 aacaaggacatcttcctgcgggagct 281374
>gb|AC162182.2| Mus musculus BAC clone RP23-73B23 from chromosome 17, complete sequence Length = 205221 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 78 tcctcctcgtcctcctcctcaccacc 103 |||||||| ||||||||||||||||| Sbjct: 66757 tcctcctcctcctcctcctcaccacc 66732
>gb|AF188124.1|AF188124 Mus musculus TGF-beta resistance-associated protein TRAG (Trag) mRNA, partial cds Length = 4467 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 2301 ctcctcctcgtcctcctcctca 2280
>gb|AF188123.1|AF188123 Mus musculus TGF-beta resistance-associated protein TRAG (Trag) mRNA, partial cds Length = 4371 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 2301 ctcctcctcgtcctcctcctca 2280
>gb|AY047575.1| Drosophila melanogaster GH08670 full length cDNA Length = 1653 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 78 tcctcctcgtcctcctcctcaccaccctcc 107 |||||||| ||||||||||||||| ||||| Sbjct: 1126 tcctcctcttcctcctcctcaccagcctcc 1097
>gb|AY702457.1|AY702457S1 Oxyuranus scutellatus scutellatus clone R37 HSP 90 mRNA, partial cds Length = 636 Score = 44.1 bits (22), Expect = 0.38 Identities = 46/54 (85%) Strand = Plus / Plus Query: 346 caacaaggacatcttcctgagggagctcattttcaatgcatctgatgctttgga 399 ||||||||| ||||| || ||||| | |||| |||||| |||||||||||||| Sbjct: 165 caacaaggaaatctttatgcgggagttaatttccaatgcctctgatgctttgga 218
>gb|BC029723.1| Mus musculus mitochondrial carrier homolog 1 (C. elegans), mRNA (cDNA clone IMAGE:5035572), with apparent retained intron Length = 2298 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 78 tcctcctcgtcctcctcctcaccacc 103 |||||||| ||||||||||||||||| Sbjct: 907 tcctcctcctcctcctcctcaccacc 882
>gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 185470 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 tcctcctcctcaccaccctccc 108 |||||||||||||||||||||| Sbjct: 43961 tcctcctcctcaccaccctccc 43982
>dbj|AK120574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134L11, full insert sequence Length = 2037 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 66 tctcctgcgcgctcctcctcgtcctc 91 |||||||||||||||||||| ||||| Sbjct: 550 tctcctgcgcgctcctcctcctcctc 575
>gb|AC107227.11| Mus musculus chromosome 5, clone RP23-62B24, complete sequence Length = 119621 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 78 tcctcctcgtcctcctcctcaccacc 103 |||||||| ||||||||||||||||| Sbjct: 102152 tcctcctcctcctcctcctcaccacc 102177
>gb|AC007066.4|AC007066 Homo sapiens chromosome 9, clone hRPK.355_O_1, complete sequence Length = 190815 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcaccac 102 ||||||||| |||||||||||||||| Sbjct: 139521 ctcctcctcctcctcctcctcaccac 139496
>gb|AE003441.3| Drosophila melanogaster chromosome X, section 25 of 74 of the complete sequence Length = 285949 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 132947 ctcctcctcgtcctcctcctca 132926
>gb|AE003433.3| Drosophila melanogaster chromosome X, section 17 of 74 of the complete sequence Length = 303602 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 78 tcctcctcgtcctcctcctcaccaccctcc 107 |||||||| ||||||||||||||| ||||| Sbjct: 298890 tcctcctcttcctcctcctcaccagcctcc 298861 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcct 96 |||||||||||||||||||| Sbjct: 60764 ctcctcctcgtcctcctcct 60783
>dbj|AK122435.1| Mus musculus mRNA for mKIAA1076 protein Length = 3973 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 163 ctcctcctcgtcctcctcctca 142
>dbj|AK122304.1| Mus musculus mRNA for mKIAA0541 protein Length = 5905 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 1428 ctcctcctcgtcctcctcctca 1407
>gb|AC163408.4| Mus musculus chromosome 5, clone RP24-300F2, complete sequence Length = 171463 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 78 tcctcctcgtcctcctcctcaccacc 103 |||||||| ||||||||||||||||| Sbjct: 32537 tcctcctcctcctcctcctcaccacc 32562
>emb|AL645723.11| Mouse DNA sequence from clone RP23-423N6 on chromosome 4, complete sequence Length = 220638 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 52783 ctcctcctcgtcctcctcctca 52762
>emb|AL772327.4| Mouse DNA sequence from clone RP23-241B2 on chromosome 4, complete sequence Length = 222631 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcaccaccctc 106 ||||||||| ||||||||||| |||||||| Sbjct: 178764 ctcctcctcctcctcctcctccccaccctc 178735
>emb|AL669828.13| Mouse DNA sequence from clone RP23-163J20 on chromosome 2, complete sequence Length = 248940 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 76 gctcctcctcgtcctcctcctcaccaccctcccc 109 |||||||||| |||||||||||||| ||||||| Sbjct: 6853 gctcctcctcttcctcctcctcaccctcctcccc 6820
>emb|X07985.1|DMCUT Drosophila cut locus mRNA for homeodomain-containing protein Length = 8202 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctca 98 |||||||||||||||||||||| Sbjct: 1120 ctcctcctcgtcctcctcctca 1099
>emb|AL713840.1|CNS07YOU Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 425A1 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 128620 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 78 tcctcctcgtcctcctcctcaccacc 103 |||||||| ||||||||||||||||| Sbjct: 66210 tcctcctcctcctcctcctcaccacc 66235
>gb|AC119804.12| Mus musculus chromosome 7, clone RP23-144D10, complete sequence Length = 208232 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 96171 ctcctcctcgtcctcctcctc 96151
>gb|AC101952.15| Mus musculus chromosome 5, clone RP24-155B4, complete sequence Length = 163118 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 78640 ctcctcctcgtcctcctcctc 78620
>gb|AC137884.9| Mus musculus chromosome 1, clone RP23-152I6, complete sequence Length = 194164 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 172986 ctcctcctcgtcctcctcctc 172966
>gb|AC119870.17| Mus musculus chromosome 3, clone RP24-261K17, complete sequence Length = 144502 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 38752 ctcctcctcgtcctcctcctc 38772
>gb|AY831395.1| Oryza sativa (indica cultivar-group) BTH-induced ERF transcriptional factor 4 (BIERF4) mRNA, complete cds Length = 1214 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 631 ctcctcctcgtcctcctcctc 611
>gb|BC053076.1| Mus musculus SAPS domain family, member 1, mRNA (cDNA clone MGC:62441 IMAGE:5698212), complete cds Length = 3812 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 2513 ctcctcctcgtcctcctcctc 2493 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 2501 ctcctcctcgtcctcctcctc 2481
>gb|AC152957.1| Mus musculus 6 BAC RP23-353I5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 66166 ctcctcctcgtcctcctcctc 66186 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 66151 ctcctcctcgtcctcctcctc 66171 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tcctcctcgtcctcctcctc 97 |||||||||||||||||||| Sbjct: 65944 tcctcctcgtcctcctcctc 65963
>gb|AC137127.11| Mus musculus chromosome 9, clone RP24-264F17, complete sequence Length = 181842 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 174096 ctcctcctcgtcctcctcctc 174076
>gb|AC138604.5| Mus musculus BAC clone RP24-236J11 from chromosome 15, complete sequence Length = 196777 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 96244 ctcctcctcgtcctcctcctc 96264
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 78914 ctcctcctcgtcctcctcctc 78934
>gb|AY459450.1| Eimeria acervulina clone JJ-22 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 801 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 335 atcatcaacacgttctacagcaacaaggagatcttcttgag 375
>gb|AY459449.1| Eimeria acervulina clone JJ-12 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 802 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 336 atcatcaacacgttctacagcaacaaggagatcttcttgag 376
>gb|AY459448.1| Eimeria acervulina clone JJ-10 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 802 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 336 atcatcaacacgttctacagcaacaaggagatcttcttgag 376
>gb|AY459447.1| Eimeria acervulina clone 12-22 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 803 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 337 atcatcaacacgttctacagcaacaaggagatcttcttgag 377
>gb|AY459446.1| Eimeria acervulina clone 12-21 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 803 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 337 atcatcaacacgttctacagcaacaaggagatcttcttgag 377
>gb|AY459445.1| Eimeria acervulina clone 12-20 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 802 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 336 atcatcaacacgttctacagcaacaaggagatcttcttgag 376
>gb|AY459444.1| Eimeria acervulina clone 12-19 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 802 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 336 atcatcaacacgttctacagcaacaaggagatcttcttgag 376
>gb|AY459443.1| Eimeria acervulina clone 12-13 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 803 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 337 atcatcaacacgttctacagcaacaaggagatcttcttgag 377
>gb|AY459442.1| Eimeria acervulina clone 12-10 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 802 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 336 atcatcaacacgttctacagcaacaaggagatcttcttgag 376
>gb|AY459441.1| Eimeria acervulina clone 12-8 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 803 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 337 atcatcaacacgttctacagcaacaaggagatcttcttgag 377
>gb|AY459440.1| Eimeria acervulina clone 12-4 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 802 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 336 atcatcaacacgttctacagcaacaaggagatcttcttgag 376
>gb|AY459439.1| Eimeria acervulina clone 12-2 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 803 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 337 atcatcaacacgttctacagcaacaaggagatcttcttgag 377
>gb|AY459438.1| Eimeria acervulina clone 12-1 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 803 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 337 atcatcaacacgttctacagcaacaaggagatcttcttgag 377
>gb|AY459437.1| Eimeria acervulina clone 1133-22 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 802 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 336 atcatcaacacgttctacagcaacaaggagatcttcttgag 376
>gb|AY459436.1| Eimeria acervulina clone 1133-21 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 802 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 336 atcatcaacacgttctacagcaacaaggagatcttcttgag 376
>gb|AY459435.1| Eimeria acervulina clone 1133-5 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 801 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 335 atcatcaacacgttctacagcaacaaggagatcttcttgag 375
>gb|AY459434.1| Eimeria acervulina clone 1133-4 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 801 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 335 atcatcaacacgttctacagcaacaaggagatcttcttgag 375
>gb|AY459433.1| Eimeria acervulina clone 1133-3 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 801 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 335 atcatcaacacgttctacagcaacaaggagatcttcttgag 375
>gb|AY459432.1| Eimeria acervulina clone 1133-2 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 801 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 335 atcatcaacacgttctacagcaacaaggagatcttcttgag 375
>gb|AY459431.1| Eimeria acervulina clone 1133-1 heat shock protein 90 (Hsp90) gene, exons 1, 2 and partial cds Length = 802 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 336 atcatcaacacgttctacagcaacaaggagatcttcttgag 376
>gb|AY459430.1| Eimeria acervulina isolate 12 heat shock protein 90 (Hsp90) gene, complete cds Length = 3898 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 atcatcaactcactctacagcaacaaggacatcttcctgag 366 ||||||||| | |||||||||||||||| |||||| |||| Sbjct: 362 atcatcaacacgttctacagcaacaaggagatcttcttgag 402
>gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, complete sequence Length = 191726 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 74010 ctcctcctcgtcctcctcctc 74030
>ref|NM_188507.1| Oryza sativa (japonica cultivar-group), Ozsa8176 predicted mRNA Length = 717 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 cgctcctcctcgtcctcctcc 95 ||||||||||||||||||||| Sbjct: 272 cgctcctcctcgtcctcctcc 252
>gb|AC114537.6| Mus musculus chromosome 15, clone RP23-51A16, complete sequence Length = 189760 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 106276 ctcctcctcgtcctcctcctc 106296
>gb|AC165162.4| Mus musculus BAC clone RP23-173L24 from chromosome 3, complete sequence Length = 211699 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcaccaccctcccc 109 ||||||||| ||||||||||| |||||||||| Sbjct: 83714 ctcctcctcctcctcctcctcctcaccctcccc 83682
>gb|AC145600.6| Mus musculus BAC clone RP24-220P24 from chromosome y, complete sequence Length = 171542 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 142434 ctcctcctcgtcctcctcctc 142454 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 142231 ctcctcctcgtcctcctcctc 142251
>gb|AC153148.4| Mus musculus BAC clone RP23-189N11 from chromosome 5, complete sequence Length = 229020 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 200301 ctcctcctcgtcctcctcctc 200321 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 200283 ctcctcctcgtcctcctcctc 200303
>ref|XM_483641.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2212 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 297 ctcctcctcgtcctcctcctc 317
>ref|XM_507320.1| PREDICTED Oryza sativa (japonica cultivar-group), P0544G09.9 mRNA Length = 2218 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 298 ctcctcctcgtcctcctcctc 318
>ref|NM_194931.1| Oryza sativa (japonica cultivar-group) putative receptor-like protein kinase (OSJNBa0004E08.12), mRNA Length = 3468 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgcgctcctcctcgtcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 27 cgcgctcctcctcctcctcctcctc 51
>ref|NM_185037.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2175 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgcgctcctcctcgtcctcctcctc 97 ||||||||||||||||||| ||||| Sbjct: 894 cgcgctcctcctcgtcctcttcctc 918
>ref|XM_468187.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2143 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 231 ctcctcctcgtcctcctcctc 211
>ref|NM_001030582.1| Gallus gallus DEAH (Asp-Glu-Ala-His) box polypeptide 38 (DHX38), mRNA Length = 4145 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 554 ctcctcctcgtcctcctcctc 534
>ref|NM_197318.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0055O03.5), mRNA Length = 486 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 249 ctcctcctcgtcctcctcctc 229
>ref|NM_183696.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2832 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 cgcgctcctcctcgtcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 49 cgcgctcctcctcctcctcctcctc 25
>ref|NM_172894.2| Mus musculus SAPS domain family, member 1 (Saps1), mRNA Length = 3812 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 2513 ctcctcctcgtcctcctcctc 2493 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 2501 ctcctcctcgtcctcctcctc 2481
>ref|NM_193158.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1350 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgcgctcctcctcgtcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 110 cgcgctcctcctcctcctcctcctc 134
>ref|XM_469532.1| Oryza sativa (japonica cultivar-group), mRNA Length = 513 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 222 ctcctcctcgtcctcctcctc 202
>ref|XM_470430.1| Oryza sativa (japonica cultivar-group), mRNA Length = 994 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgcgctcctcctcgtcctcctcctc 97 ||||||| ||||||||||||||||| Sbjct: 30 cgcgctcttcctcgtcctcctcctc 54
>ref|XM_470561.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 990 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 570 ctcctcctcgtcctcctcctc 550
>ref|NM_006751.3| Homo sapiens sperm specific antigen 2 (SSFA2), mRNA Length = 4978 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 283 ctcctcctcgtcctcctcctc 263
>ref|XM_472858.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1182 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 432 ctcctcctcgtcctcctcctc 412
>ref|NM_012330.1| Homo sapiens MYST histone acetyltransferase (monocytic leukemia) 4 (MYST4), mRNA Length = 6537 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 3555 ctcctcctcgtcctcctcctc 3535
>gb|AC133891.13| Mus musculus chromosome 1, clone RP23-287C17, complete sequence Length = 172504 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 153313 ctcctcctcgtcctcctcctc 153333
>gb|U93872.2| Kaposi's sarcoma-associated herpesvirus glycoprotein M, DNA replication protein, glycoprotein, DNA replication protein, FLICE inhibitory protein and v-cyclin genes, complete cds, and tegument protein gene, partial cds Length = 133661 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 126442 ctcctcctcgtcctcctcctc 126462 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 126430 ctcctcctcgtcctcctcctc 126450 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 126418 ctcctcctcgtcctcctcctc 126438 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 126406 ctcctcctcgtcctcctcctc 126426 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tcctcctcgtcctcctcctc 97 |||||||||||||||||||| Sbjct: 126389 tcctcctcgtcctcctcctc 126408
>gb|AC105080.8| Mus musculus chromosome 3, clone RP24-313N2, complete sequence Length = 195212 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 24538 ctcctcctcgtcctcctcctc 24518
>gb|AC121309.10| Mus musculus chromosome 3, clone RP24-303N8, complete sequence Length = 179337 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 90644 ctcctcctcgtcctcctcctc 90624
>gb|AC151955.2| Populus trichocarpa clone Pop1-041G20, complete sequence Length = 129953 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcaccaccctcccc 109 ||||||||| ||||||||||| || |||||||| Sbjct: 23544 ctcctcctcctcctcctcctcccccccctcccc 23576
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 23622 ctcctcctcgtcctcctcctc 23602
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 191487 ctcctcctcgtcctcctcctc 191507 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tcctcctcgtcctcctcctc 97 |||||||||||||||||||| Sbjct: 191464 tcctcctcgtcctcctcctc 191483
>gb|AY023458.1| Oryza sativa microsatellite MRG5783 containing (TCC)X10, genomic sequence Length = 230 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcacca 101 ||||||||| ||||||||||||||| Sbjct: 112 ctcctcctcctcctcctcctcacca 136
>gb|AY023247.1| Oryza sativa microsatellite MRG5572 containing (GGA)X8, closest to marker RM136, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 cgcgctcctcctcgtcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 129 cgcgctcctcctcctcctcctcctc 105
>gb|AY022923.1| Oryza sativa microsatellite MRG5248 containing (CTC)X8, closest to marker RM136, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgcgctcctcctcgtcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 97 cgcgctcctcctcctcctcctcctc 121
>gb|AC166645.4| Mus musculus chromosome 1, clone RP24-355D12, complete sequence Length = 169550 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 66638 ctcctcctcgtcctcctcctc 66618
>gb|AF235098.3| Homo sapiens chromosome X multiple clones map p11.23, complete sequence Length = 81461 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 67247 ctcctcctcgtcctcctcctc 67267
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0004E08, complete sequence Length = 158294 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgcgctcctcctcgtcctcctcctc 97 ||||||||||||| ||||||||||| Sbjct: 70729 cgcgctcctcctcctcctcctcctc 70753
>gb|AC161450.3| Mus musculus BAC clone RP24-75I4 from chromosome 15, complete sequence Length = 198734 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 20574 ctcctcctcgtcctcctcctc 20554 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 20541 ctcctcctcgtcctcctcctc 20521
>gb|AC164430.3| Mus musculus BAC clone RP23-441D9 from chromosome 9, complete sequence Length = 205185 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcacca 101 ||||||||| ||||||||||||||| Sbjct: 79386 ctcctcctcctcctcctcctcacca 79362
>gb|AC123708.17| Mus musculus chromosome 9, clone RP23-366E1, complete sequence Length = 195563 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 73399 ctcctcctcgtcctcctcctc 73379
>gb|U58755.3| Caenorhabditis elegans cosmid C34D4, complete sequence Length = 45313 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 16301 ctcctcctcgtcctcctcctc 16321
>gb|AC104917.9| Mus musculus chromosome 1, clone RP23-329F7, complete sequence Length = 205999 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 197673 ctcctcctcgtcctcctcctc 197693 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tcctcctcgtcctcctcctc 97 |||||||||||||||||||| Sbjct: 197758 tcctcctcgtcctcctcctc 197777 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tcctcctcgtcctcctcctc 97 |||||||||||||||||||| Sbjct: 197716 tcctcctcgtcctcctcctc 197735
>gb|AC103396.8| Mus musculus chromosome 1, clone RP24-142I5, complete sequence Length = 183930 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 127365 ctcctcctcgtcctcctcctc 127345
>gb|AC121511.12| Mus musculus chromosome 18, clone RP24-389K16, complete sequence Length = 151000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 147692 ctcctcctcgtcctcctcctc 147712
>ref|XM_602943.2| PREDICTED: Bos taurus similar to shroom (LOC524614), mRNA Length = 1413 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 338 ctcctcctcgtcctcctcctc 358
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence Length = 175704 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 cctcctcgtcctcctcctcaccacc 103 ||||||| ||||||||||||||||| Sbjct: 90865 cctcctcctcctcctcctcaccacc 90889
>gb|BC072971.1| Xenopus laevis MGC82519 protein, mRNA (cDNA clone MGC:82519 IMAGE:4963852), complete cds Length = 4490 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 75 cgctcctcctcgtcctcctcctcaccacc 103 ||||||||||| |||||||||||| |||| Sbjct: 2543 cgctcctcctcctcctcctcctcatcacc 2515
>ref|XM_617975.2| PREDICTED: Bos taurus similar to AE binding protein 2, transcript variant 1 (LOC537791), mRNA Length = 3295 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 158 ctcctcctcgtcctcctcctc 138
>ref|XM_875665.1| PREDICTED: Bos taurus similar to AE binding protein 2, transcript variant 2 (LOC537791), mRNA Length = 4617 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 138 ctcctcctcgtcctcctcctc 118
>ref|XM_590977.2| PREDICTED: Bos taurus similar to BCL6 co-repressor-like 1 (LOC540023), mRNA Length = 5684 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 3981 ctcctcctcgtcctcctcctc 3961
>ref|XM_881863.1| PREDICTED: Bos taurus similar to F-box and leucine-rich repeat protein 11, transcript variant 7 (LOC540141), mRNA Length = 5175 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 2973 ctcctcctcgtcctcctcctc 2953
>ref|XM_881848.1| PREDICTED: Bos taurus similar to F-box and leucine-rich repeat protein 11, transcript variant 6 (LOC540141), mRNA Length = 5256 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 3054 ctcctcctcgtcctcctcctc 3034
>ref|XM_881838.1| PREDICTED: Bos taurus similar to F-box and leucine-rich repeat protein 11, transcript variant 5 (LOC540141), mRNA Length = 3187 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 985 ctcctcctcgtcctcctcctc 965
>ref|XM_881827.1| PREDICTED: Bos taurus similar to F-box and leucine-rich repeat protein 11, transcript variant 4 (LOC540141), mRNA Length = 4851 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 2532 ctcctcctcgtcctcctcctc 2512
>ref|XM_591785.2| PREDICTED: Bos taurus similar to F-box and leucine-rich repeat protein 11, transcript variant 1 (LOC540141), mRNA Length = 6842 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 3027 ctcctcctcgtcctcctcctc 3007
>ref|XM_423483.1| PREDICTED: Gallus gallus similar to KIAA1754-like (LOC425762), mRNA Length = 1172 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 479 ctcctcctcgtcctcctcctc 459
>ref|XM_364571.1| Magnaporthe grisea 70-15 hypothetical protein (MG09355.4) partial mRNA Length = 6639 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 gctcctcctcgtcctcctcct 96 ||||||||||||||||||||| Sbjct: 6550 gctcctcctcgtcctcctcct 6530
>ref|XM_617059.2| PREDICTED: Bos taurus similar to SNF related kinase (LOC536909), mRNA Length = 2071 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 tcctcctcgtcctcctcctca 98 ||||||||||||||||||||| Sbjct: 1557 tcctcctcgtcctcctcctca 1537
>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence Length = 171861 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 82494 ctcctcctcgtcctcctcctc 82514
>gb|AC182700.2| Populus trichocarpa clone Pop1-73H20, complete sequence Length = 90044 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 22486 ctcctcctcgtcctcctcctc 22466
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 111013 ctcctcctcgtcctcctcctc 111033
>gb|AC116798.11| Mus musculus chromosome 1, clone RP24-329K22, complete sequence Length = 173479 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 41518 ctcctcctcgtcctcctcctc 41498
>gb|AY271265.1| Trichosurus vulpecula MHC class II antigen mRNA, complete cds Length = 2446 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 caggccgaggtgtccaggctc 316 ||||||||||||||||||||| Sbjct: 1545 caggccgaggtgtccaggctc 1565
>gb|AC131190.3| Mus musculus BAC clone RP24-332E15 from chromosome 5, complete sequence Length = 176925 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 23494 ctcctcctcgtcctcctcctc 23514
>gb|AC129775.4| Mus musculus BAC clone RP23-174N20 from chromosome 3, complete sequence Length = 225505 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 51430 ctcctcctcgtcctcctcctc 51450
>ref|NM_205465.1| Gallus gallus prion protein (p27-30) (Creutzfeldt-Jakob disease, Gerstmann-Strausler-Scheinker syndrome, fatal familial insomnia) (PRNP), mRNA Length = 2188 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 tcctcgtcctcctcctcaccaccct 105 ||||| ||||||||||||||||||| Sbjct: 935 tcctcctcctcctcctcaccaccct 959
>ref|XM_951175.1| Neurospora crassa OR74A hypothetical protein ( (AL390189) conserved hypothetical protein [Neurospora crassa OR74A] ) (NCU01646.1) partial mRNA Length = 2235 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 237 ctcctcctcgtcctcctcctc 217
>ref|XM_957204.1| Neurospora crassa OR74A hypothetical protein (NCU07711.1) partial mRNA Length = 1812 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 1296 ctcctcctcgtcctcctcctc 1276
>gb|AY576796.1| Actinoplanes phage phiAsp2, complete genome Length = 58638 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 gcgcgctcctcctcgtcctcc 92 ||||||||||||||||||||| Sbjct: 4491 gcgcgctcctcctcgtcctcc 4471
>gb|AC123507.4| Rattus norvegicus 11 BAC CH230-18C5 (Children's Hospital Oakland Research Institute) complete sequence Length = 166073 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 31767 ctcctcctcgtcctcctcctc 31747
>ref|XM_328084.1| Neurospora crassa OR74A hypothetical protein ( (AL390189) conserved hypothetical protein [Neurospora crassa OR74A] ) (NCU01646.1) partial mRNA Length = 2235 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 237 ctcctcctcgtcctcctcctc 217
>ref|XM_328416.1| Neurospora crassa OR74A hypothetical protein (NCU07711.1) partial mRNA Length = 1812 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 1296 ctcctcctcgtcctcctcctc 1276
>gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-434O14, complete sequence Length = 191358 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 111269 ctcctcctcgtcctcctcctc 111289
>ref|XM_871210.1| PREDICTED: Bos taurus similar to C-jun-amino-terminal kinase interacting protein 2 (JNK-interacting protein 2) (JIP-2) (JNK MAP kinase scaffold protein 2) (Islet-brain-2) (IB-2) (Mitogen-activated protein kinase 8-interacting protein 2) (LOC618893), mRNA Length = 3086 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 303 ctcctcctcgtcctcctcctc 283 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcctcctcgtcctcctcctc 97 |||||||||||||||||||| Sbjct: 317 tcctcctcgtcctcctcctc 298
>ref|XM_868421.1| PREDICTED: Bos taurus similar to Sodium/potassium/calcium exchanger 3 precursor (Na(+)/K(+)/Ca(2+)-exchange protein 3) (LOC616407), partial mRNA Length = 1374 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 945 ctcctcctcgtcctcctcctc 925
>gb|AC161197.9| Mus musculus chromosome 7, clone RP23-179K11, complete sequence Length = 240657 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 134080 ctcctcctcgtcctcctcctc 134060 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 134068 ctcctcctcgtcctcctcctc 134048
>gb|AC149298.1| Populus trichocarpa clone Pop1-021H24, complete sequence Length = 146635 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcaccaccctcccc 109 ||||||||| ||||||||||| || |||||||| Sbjct: 11444 ctcctcctcctcctcctcctcccccccctcccc 11412
>gb|BC070879.1| Rattus norvegicus reticulon 4, mRNA (cDNA clone IMAGE:7096609), complete cds Length = 2410 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 511 ctcctcctcgtcctcctcctc 491
>ref|XM_708744.1| Candida albicans SC5314 hypothetical protein (CaO19.8281), mRNA Length = 735 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 tcatggacatcatcatcaact 335 ||||||||||||||||||||| Sbjct: 439 tcatggacatcatcatcaact 459
>ref|XM_708704.1| Candida albicans SC5314 hypothetical protein (CaO19.664), mRNA Length = 735 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 tcatggacatcatcatcaact 335 ||||||||||||||||||||| Sbjct: 439 tcatggacatcatcatcaact 459
>gb|AC146228.2| Pan troglodytes BAC clone RP43-32P14 from 7, complete sequence Length = 221091 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 113362 ctcctcctcgtcctcctcctc 113342 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 78 tcctcctcgtcctcctcctcaccaccct 105 |||||||| ||||||||||| ||||||| Sbjct: 113340 tcctcctcctcctcctcctccccaccct 113313
>gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosome 1, complete sequence Length = 209820 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 192489 ctcctcctcgtcctcctcctc 192469
>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence Length = 130146 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcacca 101 ||||||||| ||||||||||||||| Sbjct: 53988 ctcctcctcctcctcctcctcacca 54012
>gb|DQ226745.1| Boechera divaricarpa isolate SLW-A-D10 mRNA sequence Length = 392 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 339 tctacagcaacaaggacatcttcct 363 |||||||||||||||| |||||||| Sbjct: 160 tctacagcaacaaggagatcttcct 184
>gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, complete sequence Length = 289751 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 183015 ctcctcctcgtcctcctcctc 183035
>gb|AC138394.7| Mus musculus chromosome 3, clone RP23-333D8, complete sequence Length = 227600 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 191340 ctcctcctcgtcctcctcctc 191320
>gb|AC163608.2| Mus musculus chromosome 1, clone RP24-185M14, complete sequence Length = 161555 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 21285 ctcctcctcgtcctcctcctc 21305
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 cgcgctcctcctcgtcctcctcctc 97 ||||||| ||||||||||||||||| Sbjct: 35592851 cgcgctcttcctcgtcctcctcctc 35592827 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 cgcgctcctcctcgtcctcctcctc 97 ||||||||||||||||||| ||||| Sbjct: 33057041 cgcgctcctcctcgtcctcttcctc 33057065 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 28558467 ctcctcctcgtcctcctcctc 28558487 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 cctcctcgtcctcctcctcaccacc 103 ||||||| ||||||||||||||||| Sbjct: 24544995 cctcctcctcctcctcctcaccacc 24544971 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 14175462 ctcctcctcgtcctcctcctc 14175482 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctcacca 101 ||||||||| ||||||||||||||| Sbjct: 9288231 ctcctcctcctcctcctcctcacca 9288255 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 4354500 ctcctcctcgtcctcctcctc 4354520 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcct 96 |||||||||||||||||||| Sbjct: 13820211 ctcctcctcgtcctcctcct 13820192
>gb|AC153530.9| Mus musculus 10 BAC RP23-202A18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192392 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 65755 ctcctcctcgtcctcctcctc 65735
>gb|AC166256.5| Mus musculus BAC RP23-440F21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 181903 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 148411 ctcctcctcgtcctcctcctc 148391
>gb|AC164972.2| Mus musculus BAC clone RP23-143M15 from chromosome 9, complete sequence Length = 237322 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 189186 ctcctcctcgtcctcctcctc 189166 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 189171 ctcctcctcgtcctcctcctc 189151
>gb|AC158617.9| Mus musculus 10 BAC RP23-283O2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 240410 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctc 97 ||||||||||||||||||||| Sbjct: 240030 ctcctcctcgtcctcctcctc 240010
>gb|AC122282.5| Mus musculus BAC clone RP23-240B12 from chromosome 5, complete sequence Length = 227388 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 ctcctcctcgtcctcctcctcacca 101 ||||||||| ||||||||||||||| Sbjct: 180367 ctcctcctcctcctcctcctcacca 180343 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,615,583 Number of Sequences: 3902068 Number of extensions: 4615583 Number of successful extensions: 324957 Number of sequences better than 10.0: 1218 Number of HSP's better than 10.0 without gapping: 1247 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 309860 Number of HSP's gapped (non-prelim): 14443 length of query: 445 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 423 effective length of database: 17,147,199,772 effective search space: 7253265503556 effective search space used: 7253265503556 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
