>gb|AY105428.1| Zea mays PCO136524 mRNA sequence
          Length = 583

 Score =  125 bits (63), Expect = 1e-25
 Identities = 150/179 (83%)
 Strand = Plus / Plus

                                                                       
Query: 279 tccaaaaagaggactcgtttcaattctgatgatggaaagaggaaacggctaaactacagg 338
           ||||| |||||||| | || |||||||||||| |||||||| |||||| |||||   |||
Sbjct: 191 tccaagaagaggacacattccaattctgatgacggaaagagaaaacggttaaacactagg 250

                                                                       
Query: 339 caggatgacggacctatgtcctctcagccaatagaaaccgtttacaggatattgtgccca 398
           || ||||||  | |||||| |||| ||||||| |||||| | ||||||||||||||||| 
Sbjct: 251 catgatgacacatctatgttctctgagccaattgaaaccatctacaggatattgtgcccg 310

                                                                      
Query: 399 ggaaacaagataggcggtatcttggggagaggtggtcatgttgttaacgcccttagaga 457
           | ||| ||||||||| || ||||||| ||||||||| |  ||||||| |||||||||||
Sbjct: 311 gtaaaaaagataggcagtgtcttgggaagaggtggtgacattgttaaggcccttagaga 369

>ref|NM_197154.1| Oryza sativa (japonica cultivar-group) putative RNA-binding protein
           (OSJNBa0041P03.3), mRNA
          Length = 2650

 Score =  109 bits (55), Expect = 8e-21
 Identities = 142/171 (83%)
 Strand = Plus / Plus

                                                                       
Query: 275 tacttccaaaaagaggactcgtttcaattctgatgatggaaagaggaaacggctaaacta 334
           |||||||| ||| ||| | | ||||||||||||||| |||||||||||||||||||||| 
Sbjct: 36  tacttccagaaaaaggccacatttcaattctgatgacggaaagaggaaacggctaaactc 95

                                                                       
Query: 335 caggcaggatgacggacctatgtcctctcagccaatagaaaccgtttacaggatattgtg 394
            ||||| ||||| ||| | || || ||| |||||||||||||| ||||||||||| ||||
Sbjct: 96  aaggcacgatgatggaaccatatcttctgagccaatagaaaccatttacaggatactgtg 155

                                                              
Query: 395 cccaggaaacaagataggcggtatcttggggagaggtggtcatgttgttaa 445
            || |  || ||||| ||| || ||||||| ||||| ||| || |||||||
Sbjct: 156 tccggttaaaaagattggcagtgtcttgggaagaggcggtgatattgttaa 206

>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete
             sequence
          Length = 139614

 Score =  109 bits (55), Expect = 8e-21
 Identities = 142/171 (83%)
 Strand = Plus / Minus

                                                                         
Query: 275   tacttccaaaaagaggactcgtttcaattctgatgatggaaagaggaaacggctaaacta 334
             |||||||| ||| ||| | | ||||||||||||||| |||||||||||||||||||||| 
Sbjct: 50521 tacttccagaaaaaggccacatttcaattctgatgacggaaagaggaaacggctaaactc 50462

                                                                         
Query: 335   caggcaggatgacggacctatgtcctctcagccaatagaaaccgtttacaggatattgtg 394
              ||||| ||||| ||| | || || ||| |||||||||||||| ||||||||||| ||||
Sbjct: 50461 aaggcacgatgatggaaccatatcttctgagccaatagaaaccatttacaggatactgtg 50402

                                                                
Query: 395   cccaggaaacaagataggcggtatcttggggagaggtggtcatgttgttaa 445
              || |  || ||||| ||| || ||||||| ||||| ||| || |||||||
Sbjct: 50401 tccggttaaaaagattggcagtgtcttgggaagaggcggtgatattgttaa 50351

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  109 bits (55), Expect = 8e-21
 Identities = 142/171 (83%)
 Strand = Plus / Plus

                                                                            
Query: 275      tacttccaaaaagaggactcgtttcaattctgatgatggaaagaggaaacggctaaacta 334
                |||||||| ||| ||| | | ||||||||||||||| |||||||||||||||||||||| 
Sbjct: 18300249 tacttccagaaaaaggccacatttcaattctgatgacggaaagaggaaacggctaaactc 18300308

                                                                            
Query: 335      caggcaggatgacggacctatgtcctctcagccaatagaaaccgtttacaggatattgtg 394
                 ||||| ||||| ||| | || || ||| |||||||||||||| ||||||||||| ||||
Sbjct: 18300309 aaggcacgatgatggaaccatatcttctgagccaatagaaaccatttacaggatactgtg 18300368

                                                                   
Query: 395      cccaggaaacaagataggcggtatcttggggagaggtggtcatgttgttaa 445
                 || |  || ||||| ||| || ||||||| ||||| ||| || |||||||
Sbjct: 18300369 tccggttaaaaagattggcagtgtcttgggaagaggcggtgatattgttaa 18300419

>dbj|AK066573.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072P14, full
           insert sequence
          Length = 2879

 Score =  109 bits (55), Expect = 8e-21
 Identities = 142/171 (83%)
 Strand = Plus / Plus

                                                                       
Query: 275 tacttccaaaaagaggactcgtttcaattctgatgatggaaagaggaaacggctaaacta 334
           |||||||| ||| ||| | | ||||||||||||||| |||||||||||||||||||||| 
Sbjct: 295 tacttccagaaaaaggccacatttcaattctgatgacggaaagaggaaacggctaaactc 354

                                                                       
Query: 335 caggcaggatgacggacctatgtcctctcagccaatagaaaccgtttacaggatattgtg 394
            ||||| ||||| ||| | || || ||| |||||||||||||| ||||||||||| ||||
Sbjct: 355 aaggcacgatgatggaaccatatcttctgagccaatagaaaccatttacaggatactgtg 414

                                                              
Query: 395 cccaggaaacaagataggcggtatcttggggagaggtggtcatgttgttaa 445
            || |  || ||||| ||| || ||||||| ||||| ||| || |||||||
Sbjct: 415 tccggttaaaaagattggcagtgtcttgggaagaggcggtgatattgttaa 465

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  109 bits (55), Expect = 8e-21
 Identities = 142/171 (83%)
 Strand = Plus / Plus

                                                                            
Query: 275      tacttccaaaaagaggactcgtttcaattctgatgatggaaagaggaaacggctaaacta 334
                |||||||| ||| ||| | | ||||||||||||||| |||||||||||||||||||||| 
Sbjct: 18309902 tacttccagaaaaaggccacatttcaattctgatgacggaaagaggaaacggctaaactc 18309961

                                                                            
Query: 335      caggcaggatgacggacctatgtcctctcagccaatagaaaccgtttacaggatattgtg 394
                 ||||| ||||| ||| | || || ||| |||||||||||||| ||||||||||| ||||
Sbjct: 18309962 aaggcacgatgatggaaccatatcttctgagccaatagaaaccatttacaggatactgtg 18310021

                                                                   
Query: 395      cccaggaaacaagataggcggtatcttggggagaggtggtcatgttgttaa 445
                 || |  || ||||| ||| || ||||||| ||||| ||| || |||||||
Sbjct: 18310022 tccggttaaaaagattggcagtgtcttgggaagaggcggtgatattgttaa 18310072

>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22,
              complete sequence
          Length = 177153

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 73     agctgccgccttcccgtggcgc 94
              ||||||||||||||||||||||
Sbjct: 175848 agctgccgccttcccgtggcgc 175869

>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12,
              complete sequence
          Length = 156263

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 73     agctgccgccttcccgtggcgc 94
              ||||||||||||||||||||||
Sbjct: 111997 agctgccgccttcccgtggcgc 112018

>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08,
              complete sequence
          Length = 118049

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 73     agctgccgccttcccgtggcgc 94
              ||||||||||||||||||||||
Sbjct: 113649 agctgccgccttcccgtggcgc 113670

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 73      agctgccgccttcccgtggcgc 94
               ||||||||||||||||||||||
Sbjct: 3546366 agctgccgccttcccgtggcgc 3546387

>dbj|AK062481.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-G04,
          full insert sequence
          Length = 388

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 73 agctgccgccttcccgtggcgc 94
          ||||||||||||||||||||||
Sbjct: 78 agctgccgccttcccgtggcgc 57

>emb|CR724355.2|CNS0GLUX Tetraodon nigroviridis full-length cDNA
          Length = 1052

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 272 aagtacttccaaaaagaggac 292
           |||||||||||||||||||||
Sbjct: 695 aagtacttccaaaaagaggac 715

>gb|AC119985.6| Mus musculus chromosome 5, clone RP24-502C10, complete sequence
          Length = 134739

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   ccccactaccccacccaccc 137
             ||||||||||||||||||||
Sbjct: 10861 ccccactaccccacccaccc 10842

>gb|AC165316.4| Mus musculus chromosome 5, clone RP23-168G13, complete sequence
          Length = 205237

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   ccccactaccccacccaccc 137
             ||||||||||||||||||||
Sbjct: 42333 ccccactaccccacccaccc 42352

>gb|AC135115.5| Mus musculus BAC clone RP24-251K13 from chromosome 10, complete sequence
          Length = 178241

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    gataactctagaagacacaa 268
              ||||||||||||||||||||
Sbjct: 134898 gataactctagaagacacaa 134879

>gb|AC124364.4| Mus musculus BAC clone RP24-538E16 from chromosome 12, complete sequence
          Length = 177697

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    gtacttccaaaaagaggact 293
              ||||||||||||||||||||
Sbjct: 125569 gtacttccaaaaagaggact 125550

>gb|AC122492.3| Mus musculus BAC clone RP24-390N7 from chromosome 5, complete sequence
          Length = 196275

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    tccaagtacttccaaaaaga 288
              ||||||||||||||||||||
Sbjct: 139074 tccaagtacttccaaaaaga 139055

>gb|AC131749.2| Mus musculus BAC clone RP23-26G8 from 9, complete sequence
          Length = 234280

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 417    atcttggggagaggtggtcatgtt 440
              |||||||||||||||||| |||||
Sbjct: 125464 atcttggggagaggtggtgatgtt 125487

>gb|AC123814.3| Mus musculus BAC clone RP24-235M22 from 10, complete sequence
          Length = 159486

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 249    gataactctagaagacacaa 268
              ||||||||||||||||||||
Sbjct: 141881 gataactctagaagacacaa 141900

>gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, complete genome
          Length = 190289

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     cgtggcgccgcccacgcctc 106
              ||||||||||||||||||||
Sbjct: 140852 cgtggcgccgcccacgcctc 140833

>gb|AC162308.2| Mus musculus BAC clone RP23-109E9 from chromosome 5, complete sequence
          Length = 218501

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   tccaagtacttccaaaaaga 288
             ||||||||||||||||||||
Sbjct: 54127 tccaagtacttccaaaaaga 54108

>dbj|AK035253.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
            enriched library, clone:9530005P22 product:hypothetical
            P-loop containing nucleotide triphosphate hydrolases
            structure containing protein, full insert sequence
          Length = 3396

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 274  gtacttccaaaaagaggact 293
            ||||||||||||||||||||
Sbjct: 1112 gtacttccaaaaagaggact 1131

>emb|AL807383.28| Mouse DNA sequence from clone RP23-286N14 on chromosome 4, complete
              sequence
          Length = 210053

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    ccccactaccccacccaccc 137
              ||||||||||||||||||||
Sbjct: 112117 ccccactaccccacccaccc 112136

>gb|AC158656.2| Mus musculus  BAC RP23-408F4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 194657

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     ttgagaaatttcctattctt 48
              ||||||||||||||||||||
Sbjct: 120860 ttgagaaatttcctattctt 120879

>gb|L11707.1|HEVSODMN Hevea brasiliensis Mn-superoxide dismutase (SODMn) gene, complete cds
          Length = 4968

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 306  gatgatggaaagaggaaacg 325
            ||||||||||||||||||||
Sbjct: 1743 gatgatggaaagaggaaacg 1724


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,335,131
Number of Sequences: 3902068
Number of extensions: 3335131
Number of successful extensions: 67769
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67643
Number of HSP's gapped (non-prelim): 126
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)