Clone Name | bastl27g11 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_460750.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F09823g) partial mRNA Length = 3270 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 catctttattctcctcttcac 29 ||||||||||||||||||||| Sbjct: 118 catctttattctcctcttcac 98
>gb|AC155224.3| Rhinolophus ferrumequinum clone VMRC7-156J7, complete sequence Length = 13754 Score = 42.1 bits (21), Expect = 0.81 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 ccctcccatctttattctcctcttc 27 |||||||||||||||||| |||||| Sbjct: 4056 ccctcccatctttattcttctcttc 4032
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 catctttattctcctcttcac 29 ||||||||||||||||||||| Sbjct: 782858 catctttattctcctcttcac 782878
>emb|BX666060.8| Zebrafish DNA sequence from clone CH211-133N22 in linkage group 5, complete sequence Length = 180348 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 tctttattctcctcttcacat 31 ||||||||||||||||||||| Sbjct: 96899 tctttattctcctcttcacat 96879
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 42.1 bits (21), Expect = 0.81 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 ccctcccatctttattctcctcttc 27 |||||||||||||||||| |||||| Sbjct: 411211 ccctcccatctttattcttctcttc 411187
>emb|CR405682.23| Zebrafish DNA sequence from clone DKEYP-67E6 in linkage group 12, complete sequence Length = 192457 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 gccgacctgctgctccgcctc 158 ||||||||||||||||||||| Sbjct: 164642 gccgacctgctgctccgcctc 164662
>emb|AL935064.7| Zebrafish DNA sequence from clone CH211-153K23, complete sequence Length = 157256 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 tctttattctcctcttcacat 31 ||||||||||||||||||||| Sbjct: 153799 tctttattctcctcttcacat 153779
>emb|BX088589.14| Zebrafish DNA sequence from clone DKEY-27E7 in linkage group 12, complete sequence Length = 242558 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ccgacctgctgctccgcctc 158 |||||||||||||||||||| Sbjct: 133762 ccgacctgctgctccgcctc 133781
>emb|BX511311.24| Zebrafish DNA sequence from clone DKEY-278G4 in linkage group 8, complete sequence Length = 242845 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ccgacctgctgctccgcctc 158 |||||||||||||||||||| Sbjct: 3318 ccgacctgctgctccgcctc 3337
>emb|BX293997.14| Zebrafish DNA sequence from clone DKEY-15L7 in linkage group 6, complete sequence Length = 233655 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ccgacctgctgctccgcctc 158 |||||||||||||||||||| Sbjct: 124894 ccgacctgctgctccgcctc 124913
>emb|CR381537.13| Zebrafish DNA sequence from clone DKEYP-9F9 in linkage group 14, complete sequence Length = 184228 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ccgacctgctgctccgcctc 158 |||||||||||||||||||| Sbjct: 175423 ccgacctgctgctccgcctc 175404
>emb|BX548042.7| Zebrafish DNA sequence from clone DKEY-146L4 in linkage group 20 Contains a novel gene and four CpG islands, complete sequence Length = 224072 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ccgacctgctgctccgcctc 158 |||||||||||||||||||| Sbjct: 34346 ccgacctgctgctccgcctc 34365
>emb|AJ781400.1| Cherry chlorotic rusty spot associated chrysovirus ORF4 for hypothetical protein, segment 4, genomic RNA Length = 2499 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ctcctcttcacatgccattg 38 |||||||||||||||||||| Sbjct: 1792 ctcctcttcacatgccattg 1773
>gb|DQ320509.1| Lactobacillus gasseri phage KC5a, complete genome Length = 38239 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 tcccatctttattctcctct 25 |||||||||||||||||||| Sbjct: 15387 tcccatctttattctcctct 15368
>gb|AC091610.3| Homo sapiens chromosome 1 clone RP11-220M1, complete sequence Length = 168506 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 tcccatctttattctcctct 25 |||||||||||||||||||| Sbjct: 36630 tcccatctttattctcctct 36649
>emb|AL953848.17| Zebrafish DNA sequence from clone CH211-244K5 in linkage group 6, complete sequence Length = 201360 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ccgacctgctgctccgcctc 158 |||||||||||||||||||| Sbjct: 150473 ccgacctgctgctccgcctc 150454
>gb|AF055171.1|AF055171 Haemonchus contortus clone IBD-pns65 P-glycoprotein mRNA, partial cds Length = 297 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 gctcgattcacacgaccttc 180 |||||||||||||||||||| Sbjct: 51 gctcgattcacacgaccttc 70
>emb|BX000463.19| Zebrafish DNA sequence from clone CH211-266I2, complete sequence Length = 164682 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ccgacctgctgctccgcctc 158 |||||||||||||||||||| Sbjct: 142694 ccgacctgctgctccgcctc 142675
>emb|AL935186.22| Zebrafish DNA sequence from clone CH211-250M6 in linkage group 4, complete sequence Length = 166476 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ccgacctgctgctccgcctc 158 |||||||||||||||||||| Sbjct: 112332 ccgacctgctgctccgcctc 112313
>emb|CR450709.12| Zebrafish DNA sequence from clone CH211-249J24 in linkage group 11, complete sequence Length = 157745 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ccgacctgctgctccgcctc 158 |||||||||||||||||||| Sbjct: 153710 ccgacctgctgctccgcctc 153691
>emb|BX927341.21| Zebrafish DNA sequence from clone DKEY-56J1 in linkage group 14, complete sequence Length = 203575 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ccgacctgctgctccgcctc 158 |||||||||||||||||||| Sbjct: 187112 ccgacctgctgctccgcctc 187131
>emb|AL772220.7| Mouse DNA sequence from clone RP23-409N18 on chromosome 4, complete sequence Length = 176159 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tctcctcttcacatgccatt 37 |||||||||||||||||||| Sbjct: 76202 tctcctcttcacatgccatt 76183 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,393,417 Number of Sequences: 3902068 Number of extensions: 1393417 Number of successful extensions: 24573 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 24535 Number of HSP's gapped (non-prelim): 38 length of query: 249 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 227 effective length of database: 17,147,199,772 effective search space: 3892414348244 effective search space used: 3892414348244 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)