ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl27g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY111501.1| Zea mays CL31834_1 mRNA sequence 70 6e-09
2ref|XM_464514.1| Oryza sativa (japonica cultivar-group), mRNA 66 9e-08
3ref|XM_464515.1| Oryza sativa (japonica cultivar-group), mRNA 66 9e-08
4dbj|AK067705.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 9e-08
5dbj|AK065056.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 9e-08
6dbj|AK064800.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 9e-08
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
8dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
9gb|AC164110.4| Mus musculus BAC clone RP23-307N19 from chromosom... 46 0.086
10gb|AC134596.3| Mus musculus BAC clone RP23-435C1 from chromosome... 46 0.086
11ref|NM_126047.1| Arabidopsis thaliana unknown protein AT5G66490 ... 42 1.3
12ref|NM_126078.1| Arabidopsis thaliana unknown protein AT5G66800 ... 42 1.3
13gb|AC119813.16| Mus musculus chromosome 14, clone RP23-298L20, c... 42 1.3
14gb|AC154504.2| Mus musculus BAC clone RP24-92H14 from chromosome... 42 1.3
15dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
16gb|AY183459.1| Lupinus angustifolius putative pectin methylester... 42 1.3
17gb|AY209001.1| Lupinus angustifolius pectin methylesterase mRNA,... 42 1.3
18gb|BT004996.1| Arabidopsis thaliana clone U50603 unknown protein... 42 1.3
19gb|AY088729.1| Arabidopsis thaliana clone 93374 mRNA, complete s... 42 1.3
20gb|AY084283.1| Arabidopsis thaliana clone 102248 mRNA, complete ... 42 1.3
21dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
22dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.3
23dbj|AK117559.1| Arabidopsis thaliana At5g66490 mRNA for unknown ... 42 1.3
24dbj|AB010700.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.3
25ref|NM_187376.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.3
26ref|XM_709765.1| Candida albicans SC5314 putative protein kinase... 40 5.3
27ref|XM_709703.1| Candida albicans SC5314 putative protein kinase... 40 5.3
28gb|AC158968.3| Mus musculus chromosome 1, clone RP23-411D16, com... 40 5.3
29emb|AL589765.19| Human DNA sequence from clone RP11-98D18 on chr... 40 5.3
30ref|XM_776502.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.3
31gb|AY702899.1| Tetraodon nigroviridis XK-related protein 2b (XRG... 40 5.3
32gb|AY702898.1| Tetraodon nigroviridis XK-related protein 2a (XRG... 40 5.3
33emb|AL596163.1| Listeria innocua Clip11262 complete genome, segm... 40 5.3
34dbj|AK125876.1| Homo sapiens cDNA FLJ43888 fis, clone TESTI40093... 40 5.3
35gb|AC005396.3| Arabidopsis thaliana chromosome 2 clone T26I20 ma... 40 5.3
36gb|DP000035.1| Oryctolagus cuniculus target 116 genomic scaffold 40 5.3
37dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
38dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
39dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
40dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
41dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
42gb|AC138285.8| Mus musculus chromosome 1, clone RP24-383G22, com... 40 5.3
43gb|U51918.1|PSU51918 Pisum sativum mitochondrial pyruvate dehydr... 40 5.3 
>gb|AY111501.1| Zea mays CL31834_1 mRNA sequence
          Length = 621

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 276 catgcctgcgttccacgcgtacggagatggcgggtgcctcgtctctgccccggccgagct 335
           |||||||||| || |||| |||||||||| ||||||||||||||| || ||||| |||||
Sbjct: 407 catgcctgcgctctacgcttacggagatgacgggtgcctcgtctcggcgccggctgagct 348

                                  
Query: 336 ttccgggatgttctgccgcggcg 358
             ||||  | |||||||||||||
Sbjct: 347 ggccggactcttctgccgcggcg 325
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>ref|XM_464514.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2525

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 297 cggagatggcgggtgcctcgtctctgccccggccgagctttccgggatgttctgccgcgg 356
           ||||||||| ||||| ||||| || || ||||| |||||  |||||||||||||||||||
Sbjct: 219 cggagatggagggtgtctcgtgtcggcgccggcggagctggccgggatgttctgccgcgg 278

                
Query: 357 cggcg 361
           |||||
Sbjct: 279 cggcg 283
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>ref|XM_464515.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2981

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 297 cggagatggcgggtgcctcgtctctgccccggccgagctttccgggatgttctgccgcgg 356
           ||||||||| ||||| ||||| || || ||||| |||||  |||||||||||||||||||
Sbjct: 228 cggagatggagggtgtctcgtgtcggcgccggcggagctggccgggatgttctgccgcgg 287

                
Query: 357 cggcg 361
           |||||
Sbjct: 288 cggcg 292
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>dbj|AK067705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116M10, full
           insert sequence
          Length = 2525

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 297 cggagatggcgggtgcctcgtctctgccccggccgagctttccgggatgttctgccgcgg 356
           ||||||||| ||||| ||||| || || ||||| |||||  |||||||||||||||||||
Sbjct: 219 cggagatggagggtgtctcgtgtcggcgccggcggagctggccgggatgttctgccgcgg 278

                
Query: 357 cggcg 361
           |||||
Sbjct: 279 cggcg 283
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>dbj|AK065056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J06, full
           insert sequence
          Length = 6528

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 297 cggagatggcgggtgcctcgtctctgccccggccgagctttccgggatgttctgccgcgg 356
           ||||||||| ||||| ||||| || || ||||| |||||  |||||||||||||||||||
Sbjct: 225 cggagatggagggtgtctcgtgtcggcgccggcggagctggccgggatgttctgccgcgg 284

                
Query: 357 cggcg 361
           |||||
Sbjct: 285 cggcg 289
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>dbj|AK064800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000D06, full
           insert sequence
          Length = 2981

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 297 cggagatggcgggtgcctcgtctctgccccggccgagctttccgggatgttctgccgcgg 356
           ||||||||| ||||| ||||| || || ||||| |||||  |||||||||||||||||||
Sbjct: 228 cggagatggagggtgtctcgtgtcggcgccggcggagctggccgggatgttctgccgcgg 287

                
Query: 357 cggcg 361
           |||||
Sbjct: 288 cggcg 292
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                           
Query: 300     agatggcgggtgcctcgtctctgccccggccgagctttccgggatgttctgccgcggcgg 359
               |||||| ||||| ||||| || || ||||| |||||  ||||||||||||||||||||||
Sbjct: 5630872 agatggagggtgtctcgtgtcggcgccggcggagctggccgggatgttctgccgcggcgg 5630813

                 
Query: 360     cg 361
               ||
Sbjct: 5630812 cg 5630811
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>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0419A09
          Length = 168064

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                         
Query: 300   agatggcgggtgcctcgtctctgccccggccgagctttccgggatgttctgccgcggcgg 359
             |||||| ||||| ||||| || || ||||| |||||  ||||||||||||||||||||||
Sbjct: 58608 agatggagggtgtctcgtgtcggcgccggcggagctggccgggatgttctgccgcggcgg 58549

               
Query: 360   cg 361
             ||
Sbjct: 58548 cg 58547
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>gb|AC164110.4| Mus musculus BAC clone RP23-307N19 from chromosome 12, complete
             sequence
          Length = 201050

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 74    tctcatcctcctcttttttccct 96
             |||||||||||||||||||||||
Sbjct: 75855 tctcatcctcctcttttttccct 75877
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>gb|AC134596.3| Mus musculus BAC clone RP23-435C1 from chromosome 12, complete sequence
          Length = 193068

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 74    tctcatcctcctcttttttccct 96
             |||||||||||||||||||||||
Sbjct: 32364 tctcatcctcctcttttttccct 32342
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>ref|NM_126047.1| Arabidopsis thaliana unknown protein AT5G66490 mRNA, complete cds
          Length = 542

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 gtcgtgctcttcttcttcttc 244
           |||||||||||||||||||||
Sbjct: 249 gtcgtgctcttcttcttcttc 229
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>ref|NM_126078.1| Arabidopsis thaliana unknown protein AT5G66800 mRNA, complete cds
          Length = 960

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 231 tcttcttcttcttccaaggga 251
           |||||||||||||||||||||
Sbjct: 383 tcttcttcttcttccaaggga 403
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>gb|AC119813.16| Mus musculus chromosome 14, clone RP23-298L20, complete sequence
          Length = 169207

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 79    tcctcctcttttttccctgtc 99
             |||||||||||||||||||||
Sbjct: 22023 tcctcctcttttttccctgtc 22003
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>gb|AC154504.2| Mus musculus BAC clone RP24-92H14 from chromosome 14, complete sequence
          Length = 234665

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 79    tcctcctcttttttccctgtc 99
             |||||||||||||||||||||
Sbjct: 23028 tcctcctcttttttccctgtc 23048
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
              complete sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 231    tcttcttcttcttccaaggga 251
              |||||||||||||||||||||
Sbjct: 361049 tcttcttcttcttccaaggga 361069



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 225     tcgtgctcttcttcttcttc 244
               ||||||||||||||||||||
Sbjct: 7166131 tcgtgctcttcttcttcttc 7166150
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>gb|AY183459.1| Lupinus angustifolius putative pectin methylesterase mRNA, complete
           cds
          Length = 1112

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 242 ttccaagggatcccatccttc 262
           |||||||||||||||||||||
Sbjct: 808 ttccaagggatcccatccttc 788
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>gb|AY209001.1| Lupinus angustifolius pectin methylesterase mRNA, complete cds
          Length = 1111

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 242 ttccaagggatcccatccttc 262
           |||||||||||||||||||||
Sbjct: 808 ttccaagggatcccatccttc 788
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>gb|BT004996.1| Arabidopsis thaliana clone U50603 unknown protein (At5g66490) mRNA,
           complete cds
          Length = 361

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 gtcgtgctcttcttcttcttc 244
           |||||||||||||||||||||
Sbjct: 233 gtcgtgctcttcttcttcttc 213
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>gb|AY088729.1| Arabidopsis thaliana clone 93374 mRNA, complete sequence
          Length = 542

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 gtcgtgctcttcttcttcttc 244
           |||||||||||||||||||||
Sbjct: 249 gtcgtgctcttcttcttcttc 229
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>gb|AY084283.1| Arabidopsis thaliana clone 102248 mRNA, complete sequence
          Length = 960

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 231 tcttcttcttcttccaaggga 251
           |||||||||||||||||||||
Sbjct: 383 tcttcttcttcttccaaggga 403
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>dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0414D03
          Length = 169823

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 231    tcttcttcttcttccaaggga 251
              |||||||||||||||||||||
Sbjct: 109648 tcttcttcttcttccaaggga 109668
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>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13
          Length = 83511

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 224   gtcgtgctcttcttcttcttc 244
             |||||||||||||||||||||
Sbjct: 36436 gtcgtgctcttcttcttcttc 36456
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>dbj|AK117559.1| Arabidopsis thaliana At5g66490 mRNA for unknown protein, complete
           cds, clone: RAFL17-21-B17
          Length = 438

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 224 gtcgtgctcttcttcttcttc 244
           |||||||||||||||||||||
Sbjct: 244 gtcgtgctcttcttcttcttc 224
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>dbj|AB010700.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUD21
          Length = 69850

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 231   tcttcttcttcttccaaggga 251
             |||||||||||||||||||||
Sbjct: 14283 tcttcttcttcttccaaggga 14303
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>ref|NM_187376.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1203

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 339  cgggatgttctgccgcggcggcgg 362
            ||||||||||||| ||||||||||
Sbjct: 1140 cgggatgttctgcggcggcggcgg 1163
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>ref|XM_709765.1| Candida albicans SC5314 putative protein kinase (CaO19.2268), mRNA
          Length = 1770

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 225  tcgtgctcttcttcttcttc 244
            ||||||||||||||||||||
Sbjct: 1589 tcgtgctcttcttcttcttc 1570
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>ref|XM_709703.1| Candida albicans SC5314 putative protein kinase (CaO19.9808), mRNA
          Length = 1770

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 225  tcgtgctcttcttcttcttc 244
            ||||||||||||||||||||
Sbjct: 1589 tcgtgctcttcttcttcttc 1570
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>gb|AC158968.3| Mus musculus chromosome 1, clone RP23-411D16, complete sequence
          Length = 183663

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     ctcatcctcctcttttttcc 94
              ||||||||||||||||||||
Sbjct: 144680 ctcatcctcctcttttttcc 144661
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>emb|AL589765.19| Human DNA sequence from clone RP11-98D18 on chromosome 1 Contains the
             3' end of the SNX27 gene for sorting nexin family member
             27, the TNRC4 gene for trinucleotide repeat containing 4,
             five novel genes, a ribosomal protein S11 (RPS11)
             pseudogene, the MRPL9 gene for mitochondrial ribosomal
             protein L9, the OAZ3 gene for ornithine decarboxylase
             antizyme 3, a novel gene (FLJ36032)  the TDRKH gene for
             tudor and KH domain containing, the RORC gene for
             RAR-related orphan receptor C and four CpG islands,
             complete sequence
          Length = 163389

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   ttccaagggatcccatcctt 261
             ||||||||||||||||||||
Sbjct: 86254 ttccaagggatcccatcctt 86235
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>ref|XM_776502.1| PREDICTED: Strongylocentrotus purpuratus similar to senescence
           downregulated leo1-like (LOC576164), partial mRNA
          Length = 1071

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 225 tcgtgctcttcttcttcttc 244
           ||||||||||||||||||||
Sbjct: 149 tcgtgctcttcttcttcttc 130
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>gb|AY702899.1| Tetraodon nigroviridis XK-related protein 2b (XRG2b) mRNA, complete
           cds
          Length = 2083

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 tgctcttcttcttcttccaa 247
           ||||||||||||||||||||
Sbjct: 897 tgctcttcttcttcttccaa 916
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>gb|AY702898.1| Tetraodon nigroviridis XK-related protein 2a (XRG2a) mRNA, complete
           cds
          Length = 1466

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 228 tgctcttcttcttcttccaa 247
           ||||||||||||||||||||
Sbjct: 868 tgctcttcttcttcttccaa 887
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>emb|AL596163.1| Listeria innocua Clip11262 complete genome, segment 1/12
          Length = 231450

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    tggtcgtgctcttcttcttc 241
              ||||||||||||||||||||
Sbjct: 181404 tggtcgtgctcttcttcttc 181385
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>dbj|AK125876.1| Homo sapiens cDNA FLJ43888 fis, clone TESTI4009306, moderately
           similar to Homo sapiens ornithine decarboxylase antizyme
           3 (OAZ3)
          Length = 3786

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 242 ttccaagggatcccatcctt 261
           ||||||||||||||||||||
Sbjct: 300 ttccaagggatcccatcctt 281
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>gb|AC005396.3| Arabidopsis thaliana chromosome 2 clone T26I20 map mi398, complete
             sequence
          Length = 85214

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   ctcttcttcttcttccaagg 249
             ||||||||||||||||||||
Sbjct: 34713 ctcttcttcttcttccaagg 34694
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>gb|DP000035.1| Oryctolagus cuniculus target 116 genomic scaffold
          Length = 434755

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 74     tctcatcctcctcttttttccctg 97
              ||||||||||||||| ||||||||
Sbjct: 423797 tctcatcctcctcttctttccctg 423774
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 339      cgggatgttctgccgcggcggcgg 362
                ||||||||||||| ||||||||||
Sbjct: 18605239 cgggatgttctgcggcggcggcgg 18605216
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>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1197_D06
          Length = 103844

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 339   cgggatgttctgccgcggcggcgg 362
             ||||||||||||| ||||||||||
Sbjct: 30293 cgggatgttctgcggcggcggcgg 30270
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>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0005E02
          Length = 89380

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 339   cgggatgttctgccgcggcggcgg 362
             ||||||||||||| ||||||||||
Sbjct: 57781 cgggatgttctgcggcggcggcgg 57758
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>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1381_H04
          Length = 130961

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   tcgtgctcttcttcttcttc 244
             ||||||||||||||||||||
Sbjct: 18236 tcgtgctcttcttcttcttc 18255
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>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0592C05
          Length = 150478

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    tcgtgctcttcttcttcttc 244
              ||||||||||||||||||||
Sbjct: 118210 tcgtgctcttcttcttcttc 118229
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>gb|AC138285.8| Mus musculus chromosome 1, clone RP24-383G22, complete sequence
          Length = 216104

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    ctcatcctcctcttttttcc 94
             ||||||||||||||||||||
Sbjct: 47192 ctcatcctcctcttttttcc 47173
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>gb|U51918.1|PSU51918 Pisum sativum mitochondrial pyruvate dehydrogenase E1 alpha subunit
           mRNA, complete cds
          Length = 1630

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 231 tcttcttcttcttccaagggatcc 254
           ||||||||||||||||| ||||||
Sbjct: 251 tcttcttcttcttccaacggatcc 274


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,096,885
Number of Sequences: 3902068
Number of extensions: 3096885
Number of successful extensions: 625095
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 624574
Number of HSP's gapped (non-prelim): 521
length of query: 396
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 374
effective length of database: 17,147,199,772
effective search space: 6413052714728
effective search space used: 6413052714728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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