>ADRB1_CANFA (P79148) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1|
           adrenoreceptor)
          Length = 473

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 18/37 (48%), Positives = 20/37 (54%)
 Frame = -1

Query: 271 PLPAQRPAVRHDPLSRLHDLPRPAAARPVMHGRAGSR 161
           P PA  PA    P S     PRPAAA P+ +GR G R
Sbjct: 275 PPPAPAPAPPPAPGS-----PRPAAAAPLANGRVGRR 306

>IF2_THEFY (Q47RV1) Translation initiation factor IF-2|
          Length = 955

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -1

Query: 301 GXPRALAHGGPLPAQRPAVRHDPLSRLHDLPR-PAAARPVMHGRAG 167
           G P + A G P P  RP  R  P++     P  P  ARP    R+G
Sbjct: 229 GRPGSSAGGPPRPVPRPGPRPSPMNMPASRPTPPGGARPSTSSRSG 274

>5E5_RAT (Q63003) 5E5 antigen|
          Length = 825

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -1

Query: 253 PAVRHDPLSRLHDLPRPAAARPVMHGRAGSRSWLAASRIGG 131
           PA+   P +  H +P P  A   + GR    SW    R GG
Sbjct: 539 PALAGAPTAHAHAVPGPGPAAATLGGRGRRGSWRGGRRGGG 579

>CRF_SHEEP (P01142) Corticoliberin precursor (Corticotropin-releasing factor)|
           (CRF) (Corticotropin-releasing hormone)
           (Endorpholiberin)
          Length = 190

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -1

Query: 292 RALAHGGPLPAQRPAVRH-DPLSRLHDLPRP 203
           RAL   GP+P  R A +H  PLS    LP+P
Sbjct: 23  RALLSRGPIPGARQASQHPQPLSFFQPLPQP 53

>YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear protein ZAP3)|
          Length = 1386

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 102 YPPLSVQPSSPPILLAASQDRLPARPCI 185
           YPP S QP  PP   + S+ +LP  P I
Sbjct: 176 YPPSSAQPYLPPAQPSPSKPQLPPPPSI 203

>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)|
          Length = 825

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 18/61 (29%), Positives = 25/61 (40%)
 Frame = -1

Query: 304 LGXPRALAHGGPLPAQRPAVRHDPLSRLHDLPRPAAARPVMHGRAGSRSWLAASRIGGED 125
           +G   A A G   PA++P    +P   + D P P+  RP   G     S  +A    G  
Sbjct: 338 VGEDAAAAEGRTPPARQPRAAQEPPIVISDSPPPSPRRPAGPGPLSFVSSSSAQVSSGPG 397

Query: 124 G 122
           G
Sbjct: 398 G 398

>RELA_STRAT (O85709) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 841

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
 Frame = -1

Query: 277 GGPL------PAQRPAVRHDPLSRLHDLPRPAAARPVMHGRAGSRSWLAASRI 137
           GGP+      PA +PA R  P     + PRP   R    G+  +RS  +++R+
Sbjct: 31  GGPVEHDRSAPADKPAERTRPKPAPPERPRPPPPRARAAGQPAARSGGSSNRV 83

>TRUD_XANAC (Q8PLR6) tRNA pseudouridine synthase D (EC 5.4.99.-) (tRNA-uridine|
           isomerase D) (tRNA pseudouridylate synthase D)
          Length = 369

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = -1

Query: 271 PLPAQRPAVRHDPLSRLHDLPRPAAARPVMHGRAGSRSW 155
           P P  R  +RHD  S L    R A    V+  R    SW
Sbjct: 192 PAPTSRRRLRHDQRSMLLSAARSALFNRVLGARVAQGSW 230


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.120    0.340 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,467,314
Number of Sequences: 219361
Number of extensions: 438495
Number of successful extensions: 1247
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)