Clone Name | bastl27f12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SURE_HALSA (Q9HQB2) 5'-nucleotidase surE (EC 3.1.3.5) (Nucleosid... | 28 | 9.1 | 2 | PKNA_MYCTU (P65726) Probable serine/threonine-protein kinase pkn... | 28 | 9.1 | 3 | PKNA_MYCBO (P65727) Probable serine/threonine-protein kinase pkn... | 28 | 9.1 |
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>SURE_HALSA (Q9HQB2) 5'-nucleotidase surE (EC 3.1.3.5) (Nucleoside| 5'-monophosphate phosphohydrolase) Length = 258 Score = 27.7 bits (60), Expect = 9.1 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +1 Query: 49 SPASFPDATGESKVSRRSHALDLT 120 +P DATGE V+R SHA D+T Sbjct: 172 APHPDADATGEMVVTRPSHAYDMT 195
>PKNA_MYCTU (P65726) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 431 Score = 27.7 bits (60), Expect = 9.1 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 9/40 (22%) Frame = +1 Query: 10 PPIPSQKP*TDRPSPASFPDAT---------GESKVSRRS 102 PP PSQ P R +PA+ P T G + SRRS Sbjct: 280 PPRPSQTPPPGRAAPAAIPSGTTARVAANSAGRTAASRRS 319
>PKNA_MYCBO (P65727) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 431 Score = 27.7 bits (60), Expect = 9.1 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 9/40 (22%) Frame = +1 Query: 10 PPIPSQKP*TDRPSPASFPDAT---------GESKVSRRS 102 PP PSQ P R +PA+ P T G + SRRS Sbjct: 280 PPRPSQTPPPGRAAPAAIPSGTTARVAANSAGRTAASRRS 319 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,199,783 Number of Sequences: 219361 Number of extensions: 306863 Number of successful extensions: 1307 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1244 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1306 length of database: 80,573,946 effective HSP length: 23 effective length of database: 75,528,643 effective search space used: 1812687432 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)