ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl27f06 |
|---|---|
| Clone Library Name | barley_pub |
>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1| Length = 1051 Score = 120 bits (300), Expect = 2e-27 Identities = 68/93 (73%), Positives = 69/93 (74%), Gaps = 5/93 (5%) Frame = +3 Query: 198 MLPPKREIVASEVENQQKKARPXXXXXX-----XXXXGRPTEIDEDLHSRQLAVYGRETM 362 MLP KREIVA EVE+ QKK R GR EIDEDLHSRQLAVYGRETM Sbjct: 1 MLPRKREIVAGEVEDLQKKTRAGEGEVTREEGDAAMAGRGNEIDEDLHSRQLAVYGRETM 60 Query: 363 KRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVT 461 KRLF SNVLVSGLQGLGAEIA NLVLAGVKSVT Sbjct: 61 KRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 93
>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2| Length = 1051 Score = 117 bits (294), Expect = 1e-26 Identities = 67/93 (72%), Positives = 68/93 (73%), Gaps = 5/93 (5%) Frame = +3 Query: 198 MLPPKREIVASEVENQQKKARPXXXXXX-----XXXXGRPTEIDEDLHSRQLAVYGRETM 362 MLP KREIVA EVE+ QKK R GR EIDEDLHSRQLAVYGRETM Sbjct: 1 MLPRKREIVAGEVEDLQKKTRAGEGEATREEGDAAMAGRGNEIDEDLHSRQLAVYGRETM 60 Query: 363 KRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVT 461 K LF SNVLVSGLQGLGAEIA NLVLAGVKSVT Sbjct: 61 KPLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 93
>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3| Length = 1053 Score = 94.7 bits (234), Expect = 1e-19 Identities = 55/96 (57%), Positives = 60/96 (62%), Gaps = 8/96 (8%) Frame = +3 Query: 198 MLPPKREIVASEVENQQK--------KARPXXXXXXXXXXGRPTEIDEDLHSRQLAVYGR 353 MLP KR A+ + + R P EIDEDLHSRQLAVYGR Sbjct: 1 MLPSKRPSDAAAGDENGRGGDARGPGSGRRRARAAAGAVTAAPQEIDEDLHSRQLAVYGR 60 Query: 354 ETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVT 461 ETM+RLFAS+VLVSGL GLGAEIA NL LAGVKSVT Sbjct: 61 ETMRRLFASDVLVSGLNGLGAEIAKNLALAGVKSVT 96
>UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1| Length = 1058 Score = 70.9 bits (172), Expect = 2e-12 Identities = 36/56 (64%), Positives = 43/56 (76%) Frame = +3 Query: 294 GRPTEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVT 461 G +IDE L+SRQL V G E MKRL S+VLVSGL+GLG EIA N++L GVK+VT Sbjct: 45 GSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIILGGVKAVT 100
>UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)| Length = 1058 Score = 70.9 bits (172), Expect = 2e-12 Identities = 36/56 (64%), Positives = 43/56 (76%) Frame = +3 Query: 294 GRPTEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVT 461 G +IDE L+SRQL V G E MKRL S+VLVSGL+GLG EIA N++L GVK+VT Sbjct: 45 GSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIILGGVKAVT 100
>UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1| Length = 1058 Score = 68.9 bits (167), Expect = 6e-12 Identities = 35/56 (62%), Positives = 42/56 (75%) Frame = +3 Query: 294 GRPTEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVT 461 G +IDE L+SRQL V G E MK L S+VLVSGL+GLG EIA N++L GVK+VT Sbjct: 45 GSEADIDESLYSRQLYVLGHEAMKMLQTSSVLVSGLRGLGVEIAKNIILGGVKAVT 100
>UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1| Length = 1024 Score = 67.8 bits (164), Expect = 1e-11 Identities = 34/52 (65%), Positives = 42/52 (80%) Frame = +3 Query: 306 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVT 461 EIDE L+SRQL V G+E M ++ SNVL+ GL+GLG EIA N+VLAGVKS+T Sbjct: 13 EIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMT 64
>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA transport| protein 3) Length = 1012 Score = 64.3 bits (155), Expect = 2e-10 Identities = 33/51 (64%), Positives = 39/51 (76%) Frame = +3 Query: 309 IDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVT 461 IDE L+SRQL V G E MK++ SNVL+ G +GLG EIA N+ LAGVKSVT Sbjct: 15 IDEGLYSRQLYVLGHEAMKQMSQSNVLIIGCKGLGVEIAKNVCLAGVKSVT 65
>UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)| Length = 1011 Score = 63.2 bits (152), Expect = 3e-10 Identities = 32/51 (62%), Positives = 40/51 (78%) Frame = +3 Query: 309 IDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVT 461 +DE+L+SRQL V G M+R+ + VLVSGLQGLGAE+A NLVL GV S+T Sbjct: 10 LDEELYSRQLYVLGSPAMQRIQGARVLVSGLQGLGAEVAKNLVLMGVGSLT 60
>ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating| enzyme subunit 1) Length = 346 Score = 57.8 bits (138), Expect = 1e-08 Identities = 30/58 (51%), Positives = 41/58 (70%) Frame = +3 Query: 294 GRPTEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVTCM 467 G +E + + RQ+ ++G E KRL AS VL+ GL+GLGAEIA NL+LAGVK +T + Sbjct: 9 GGISEEEAAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTML 66
>ULE1A_MOUSE (Q9R1T2) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating| enzyme subunit 1) Length = 350 Score = 57.8 bits (138), Expect = 1e-08 Identities = 29/58 (50%), Positives = 41/58 (70%) Frame = +3 Query: 294 GRPTEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVTCM 467 G +E + + RQ+ ++G E KRL AS VL+ G++GLGAEIA NL+LAGVK +T + Sbjct: 13 GGISEEEAAQYDRQIRLWGLEAQKRLRASRVLIVGMKGLGAEIAKNLILAGVKGLTML 70
>HESA1_ANAVT (P46049) Protein hesA, heterocyst| Length = 267 Score = 38.5 bits (88), Expect = 0.009 Identities = 20/50 (40%), Positives = 28/50 (56%) Frame = +3 Query: 300 PTEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGV 449 PTE++ L +G KRL ++ VLV+G+ GLG A L +AGV Sbjct: 6 PTELERYSRQMMLPNFGEAAQKRLKSATVLVTGVGGLGGTAALYLAVAGV 55
>UBA3_SCHPO (Q09765) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme E1 3) Length = 444 Score = 35.8 bits (81), Expect = 0.059 Identities = 16/40 (40%), Positives = 26/40 (65%) Frame = +3 Query: 354 ETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVTCMMM 473 ET+K F+S +L+ G GLG EI +L L+G + ++ + M Sbjct: 37 ETLKSAFSSKILIIGAGGLGCEILKDLALSGFRDLSVIDM 76
>HESA2_ANAVT (P46048) Protein hesA, vegetative| Length = 265 Score = 35.4 bits (80), Expect = 0.077 Identities = 19/49 (38%), Positives = 29/49 (59%) Frame = +3 Query: 303 TEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGV 449 TE++ L +G+E +RL ++ VLV+G+ GLG A L +AGV Sbjct: 7 TELERYRRQIILPGFGQEAQQRLKSATVLVTGVGGLGGTAALYLAIAGV 55
>ULA1_CHICK (Q5ZIE6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (APP-BP1) Length = 535 Score = 33.5 bits (75), Expect = 0.29 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = +3 Query: 309 IDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVT 461 + E + RQL ++G + L +++V V G EI NLVL G+ S T Sbjct: 9 LKEQRYDRQLRLWGDHGQEALESAHVCVINATATGTEILKNLVLPGIGSFT 59
>RHC31_YEAST (Q06624) DNA damage tolerance protein RHC31 (RAD31 homolog)| Length = 347 Score = 33.5 bits (75), Expect = 0.29 Identities = 14/49 (28%), Positives = 30/49 (61%) Frame = +3 Query: 321 LHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVTCM 467 L+ RQ+ ++G + ++ VL+ L +G+EI ++VL+G+ +T + Sbjct: 15 LYDRQIRLWGMTAQANMRSAKVLLINLGAIGSEITKSIVLSGIGHLTIL 63
>HESA_PLEBO (P46037) Protein hesA| Length = 277 Score = 32.7 bits (73), Expect = 0.50 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +3 Query: 300 PTEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGV 449 PTE++ L + + +RL + LV+G+ GLG A L +AG+ Sbjct: 6 PTELERYRRQMMLPGFDEDAQRRLKSFTALVTGVGGLGGTAALYLAVAGI 55
>HESA_ANASP (P18500) Protein hesA| Length = 252 Score = 32.7 bits (73), Expect = 0.50 Identities = 16/35 (45%), Positives = 22/35 (62%) Frame = +3 Query: 345 YGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGV 449 +G KRL ++ VLV+G+ GLG A L +AGV Sbjct: 6 FGEAAQKRLKSATVLVTGVGGLGGTAALYLAVAGV 40
>ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 534 Score = 32.3 bits (72), Expect = 0.65 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = +3 Query: 309 IDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVT 461 + E + RQL ++G + L +++V + G EI NLVL G+ S T Sbjct: 8 LKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFT 58
>ULA1_MOUSE (Q8VBW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 534 Score = 32.3 bits (72), Expect = 0.65 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = +3 Query: 309 IDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVT 461 + E + RQL ++G + L +++V + G EI NLVL G+ S T Sbjct: 8 LKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFT 58
>ULA1_HUMAN (Q13564) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) (Protooncogene protein 1) (HPP1) Length = 534 Score = 32.3 bits (72), Expect = 0.65 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = +3 Query: 309 IDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVT 461 + E + RQL ++G + L +++V + G EI NLVL G+ S T Sbjct: 8 LKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFT 58
>ULA1_CAEEL (Q18217) NEDD8-activating enzyme E1 regulatory subunit| (Ubiquitin-like activation protein 1) Length = 541 Score = 32.3 bits (72), Expect = 0.65 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = +3 Query: 324 HSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKS 455 + RQ+ ++G E + +++ V G L EI +LVLAGV+S Sbjct: 10 YDRQVRLWGEEGQASIGSTSACVLGSDSLATEILKSLVLAGVQS 53
>ULA1_MACFA (Q4R3L6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 510 Score = 32.3 bits (72), Expect = 0.65 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = +3 Query: 309 IDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVT 461 + E + RQL ++G + L +++V + G EI NLVL G+ S T Sbjct: 8 LKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFT 58
>RAD31_SCHPO (P79064) DNA damage tolerance protein rad31| Length = 307 Score = 32.0 bits (71), Expect = 0.85 Identities = 17/43 (39%), Positives = 25/43 (58%) Frame = +3 Query: 321 LHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGV 449 L+ RQ+ ++G + L S VL+ L EIA NLVL+G+ Sbjct: 13 LYDRQIRLWGFNAQQALKQSRVLLITASPLANEIAKNLVLSGI 55
>ULA1_XENLA (Q6NTW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (APP-BP1) Length = 533 Score = 30.8 bits (68), Expect = 1.9 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = +3 Query: 309 IDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGV 449 I E + RQL ++G + L +++V + G EI NLVL G+ Sbjct: 7 IKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGI 53
>ULA1_BRARE (Q7SXP2) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (APP-BP1) Length = 533 Score = 30.0 bits (66), Expect = 3.2 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +3 Query: 300 PTEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVT 461 P E + RQL ++G + L ++V + G EI NLVL G+ + T Sbjct: 4 PKTSKEQRYDRQLRLWGDHGQEALENAHVCLINATASGTEILKNLVLPGIGAFT 57
>ULA1_ARATH (P42744) NEDD8-activating enzyme E1 regulatory subunit| (Auxin-resistance protein AXR1) Length = 540 Score = 29.6 bits (65), Expect = 4.2 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = +3 Query: 300 PTEID-EDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSVT 461 PT ++ + + RQL ++G L +++ + G+E NLVL GV S+T Sbjct: 15 PTMVEPKTKYDRQLRIWGEVGQAALEEASICLLNCGPTGSEALKNLVLGGVGSIT 69
>TTLL7_HUMAN (Q6ZT98) Tubulin--tyrosine ligase-like protein 7 (Protein NYD-SP30)| Length = 887 Score = 29.3 bits (64), Expect = 5.5 Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -3 Query: 424 AISAPRPWSPDTRTLEAKRRFIVSRPYTA--SWRLWRSSSISVGLP 293 +ISA P S DTR A++ VSRP +A S L R+SS LP Sbjct: 607 SISAQSPSSGDTRPFSAQQMISVSRPTSASRSHSLNRASSYMRHLP 652
>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 640 Score = 29.3 bits (64), Expect = 5.5 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +3 Query: 351 RETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSV 458 RE + + VLV G G+G E+ NLVL G + Sbjct: 9 RELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHI 44
>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating| enzyme subunit 2) (Anthracycline-associated resistance ARX) Length = 638 Score = 29.3 bits (64), Expect = 5.5 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +3 Query: 351 RETMKRLFASNVLVSGLQGLGAEIAXNLVLAGVKSV 458 RE + + VLV G G+G E+ NLVL G + Sbjct: 9 RELAEAVSGGRVLVVGAGGIGCELLKNLVLTGFSHI 44
>IWS1_ASPFU (Q4WSM6) Transcription factor iws1| Length = 460 Score = 28.5 bits (62), Expect = 9.4 Identities = 16/61 (26%), Positives = 26/61 (42%) Frame = +3 Query: 213 REIVASEVENQQKKARPXXXXXXXXXXGRPTEIDEDLHSRQLAVYGRETMKRLFASNVLV 392 RE++ + N +ARP RPT + E +R L G + +R+ A + Sbjct: 398 RELLPPRLAN---RARPEITHTSYTIVPRPTVVQESKFARPLGASGEDRFRRMRARQIAA 454 Query: 393 S 395 S Sbjct: 455 S 455 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,761,681 Number of Sequences: 219361 Number of extensions: 623772 Number of successful extensions: 2840 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 2823 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2838 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
