>gb|AC162690.2| Mus musculus chromosome 5, clone RP24-170F2, complete sequence
          Length = 180370

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 118    caccccaagctcggctctcttcctcc 143
              ||||| ||||||||||||||||||||
Sbjct: 108485 cacccaaagctcggctctcttcctcc 108460

>ref|XM_765837.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_608_38568_37117)
            partial mRNA
          Length = 1452

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 273  aaagccgaccttggagaggaag 294
            ||||||||||||||||||||||
Sbjct: 1158 aaagccgaccttggagaggaag 1137

>dbj|AK141536.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched
            library, clone:C630015E03 product:unclassifiable, full
            insert sequence
          Length = 4087

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 118  caccccaagctcggctctcttcctcc 143
            ||||| ||||||||||||||||||||
Sbjct: 2565 cacccaaagctcggctctcttcctcc 2540

>gb|AF109906.1|MMHC310M6 Mus musculus MHC class III region RD gene, partial cds; Bf, C2, G9A,
             NG22, G9, HSP70, HSP70, HSC70t, and smRNP genes, complete
             cds; G7A gene, partial cds; and unknown genes
          Length = 158405

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 249   atgaagatcaggaagaggaca 269
             |||||||||||||||||||||
Sbjct: 66680 atgaagatcaggaagaggaca 66660

>gb|BC010808.1| Mus musculus solute carrier family 44, member 4, mRNA (cDNA clone
           MGC:18903 IMAGE:4240658), complete cds
          Length = 2317

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 249 atgaagatcaggaagaggaca 269
           |||||||||||||||||||||
Sbjct: 147 atgaagatcaggaagaggaca 127

>gb|AC145908.3| Pan troglodytes BAC clone RP43-40K18 from 7, complete sequence
          Length = 209731

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 340   atccaggacaggaggtagttt 360
             |||||||||||||||||||||
Sbjct: 92964 atccaggacaggaggtagttt 92944

>ref|NM_023557.2| Mus musculus solute carrier family 44, member 4 (Slc44a4), mRNA
          Length = 2317

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 249 atgaagatcaggaagaggaca 269
           |||||||||||||||||||||
Sbjct: 147 atgaagatcaggaagaggaca 127

>gb|BC052652.1| Mus musculus solute carrier family 44, member 4, mRNA (cDNA clone
           MGC:60462 IMAGE:30034507), complete cds
          Length = 2275

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 249 atgaagatcaggaagaggaca 269
           |||||||||||||||||||||
Sbjct: 147 atgaagatcaggaagaggaca 127

>emb|AL050342.42|HSDJ655K7 Human DNA sequence from clone RP4-655K7 on chromosome 1p35.3-36.13
             Contains part of a gene encoding a novel protein,,
             complete sequence
          Length = 116857

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 282   cttggagaggaagaatgggga 302
             |||||||||||||||||||||
Sbjct: 82232 cttggagaggaagaatgggga 82212

>gb|AC087117.9| Mus Musculus Strain C57BL6/J chromosome 17 BAC, RP23-349B4, Complete
             Sequence, complete sequence
          Length = 221899

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 249   atgaagatcaggaagaggaca 269
             |||||||||||||||||||||
Sbjct: 25979 atgaagatcaggaagaggaca 25959

>gb|AC009245.11| Homo sapiens chromosome 7 clone RP11-351B12, complete sequence
          Length = 197659

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 340   atccaggacaggaggtagttt 360
             |||||||||||||||||||||
Sbjct: 93408 atccaggacaggaggtagttt 93388

>dbj|AK145621.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
           library, clone:I1C0023H20 product:hypothetical
           Cysteine-rich region profile containing protein, full
           insert sequence
          Length = 2255

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 249 atgaagatcaggaagaggaca 269
           |||||||||||||||||||||
Sbjct: 141 atgaagatcaggaagaggaca 121

>dbj|AK164684.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
           library, clone:D630001H16 product:NG22 homolog [Homo
           sapiens], full insert sequence
          Length = 3057

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 249 atgaagatcaggaagaggaca 269
           |||||||||||||||||||||
Sbjct: 150 atgaagatcaggaagaggaca 130

>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib
          Length = 2013089

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 120    ccccaagctcggctctcttcctcca 144
              ||||||||||||||||| |||||||
Sbjct: 101890 ccccaagctcggctctcctcctcca 101914

>emb|AL837508.21| Mouse DNA sequence from clone RP23-256C7 on chromosome 4, complete
             sequence
          Length = 158009

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 122   ccaagctcggctctcttcctc 142
             |||||||||||||||||||||
Sbjct: 57605 ccaagctcggctctcttcctc 57585

>emb|CT025759.14| Mouse DNA sequence from clone RP24-317H19 on chromosome 17, complete
              sequence
          Length = 171682

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 249    atgaagatcaggaagaggaca 269
              |||||||||||||||||||||
Sbjct: 145390 atgaagatcaggaagaggaca 145370

>ref|XM_464087.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1527

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 34  gctcgccggcagccttggcc 53
           ||||||||||||||||||||
Sbjct: 529 gctcgccggcagccttggcc 510

>gb|AC164155.2| Mus musculus BAC clone RP24-548I6 from chromosome 14, complete sequence
          Length = 215419

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   gaccttggagaggaagaatg 298
             ||||||||||||||||||||
Sbjct: 54607 gaccttggagaggaagaatg 54626

>gb|AY221085.1| Solanum tuberosum UDP-Glc-4-epimerase (StUGE51) mRNA, complete cds
          Length = 1286

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 189  accgagctccttctcagctt 208
            ||||||||||||||||||||
Sbjct: 1095 accgagctccttctcagctt 1076

>gb|BC083577.1| Rattus norvegicus zinc finger and BTB domain containing 17, mRNA
           (cDNA clone MGC:93950 IMAGE:7113925), complete cds
          Length = 2795

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 agctcggctctcttcctcca 144
           ||||||||||||||||||||
Sbjct: 197 agctcggctctcttcctcca 178

>ref|NM_001012105.1| Rattus norvegicus zinc finger and BTB domain containing 17
           (Zbtb17), mRNA
          Length = 2795

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 agctcggctctcttcctcca 144
           ||||||||||||||||||||
Sbjct: 197 agctcggctctcttcctcca 178

>gb|BC014231.2| Homo sapiens cDNA clone IMAGE:4544718, partial cds
          Length = 1120

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 114 gatccaccccaagctcggctctct 137
           |||||| |||||||||||||||||
Sbjct: 560 gatccatcccaagctcggctctct 537

>emb|BX901885.7| Human DNA sequence from clone WI2-81939E3 on chromosome X Contains
           the 5' end of the IL3RA gene for interleukin 3 receptor
           alpha (low affinity), complete sequence
          Length = 34516

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 114 gatccaccccaagctcggctctct 137
           |||||| |||||||||||||||||
Sbjct: 852 gatccatcccaagctcggctctct 829

>emb|BX649553.6| Human DNA sequence from clone RP4-674K6 on chromosome X, complete
             sequence
          Length = 86882

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   gatccaccccaagctcggctctct 137
             |||||| |||||||||||||||||
Sbjct: 85734 gatccatcccaagctcggctctct 85711

>gb|AC161460.5| Mus musculus BAC clone RP23-125A3 from chromosome 14, complete sequence
          Length = 208571

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    gaccttggagaggaagaatg 298
              ||||||||||||||||||||
Sbjct: 129925 gaccttggagaggaagaatg 129944

>gb|AC091714.3| Papio anubis clone RP41-93A16, complete sequence
          Length = 135851

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    gaggaagaatggggaatggg 307
              ||||||||||||||||||||
Sbjct: 106910 gaggaagaatggggaatggg 106891

>gb|AC117399.2| Homo sapiens 3 BAC RP11-179B14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 94000

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   cagatccaggacaggaggta 356
             ||||||||||||||||||||
Sbjct: 51211 cagatccaggacaggaggta 51192

>gb|AC097714.3| Homo sapiens BAC clone RP11-324H7 from 4, complete sequence
          Length = 181756

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    agaggaagaatggggaatgg 306
              ||||||||||||||||||||
Sbjct: 115021 agaggaagaatggggaatgg 115040

>ref|XM_575944.1| PREDICTED: Rattus norvegicus zinc finger protein 100 (predicted)
           (Zfp100_predicted), mRNA
          Length = 2777

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 agctcggctctcttcctcca 144
           ||||||||||||||||||||
Sbjct: 148 agctcggctctcttcctcca 129

>dbj|AK121266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D18, full
           insert sequence
          Length = 2121

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 34  gctcgccggcagccttggcc 53
           ||||||||||||||||||||
Sbjct: 817 gctcgccggcagccttggcc 798

>emb|AL137100.4|CNS01DWC Human chromosome 14 DNA sequence BAC R-108M12 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 166486

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   tgaagatcaggaagaggaca 269
             ||||||||||||||||||||
Sbjct: 20121 tgaagatcaggaagaggaca 20102

>emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1077A2 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 208102

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   tgaagatcaggaagaggaca 269
             ||||||||||||||||||||
Sbjct: 22239 tgaagatcaggaagaggaca 22258


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,560,034
Number of Sequences: 3902068
Number of extensions: 3560034
Number of successful extensions: 63511
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63457
Number of HSP's gapped (non-prelim): 54
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)