>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 63      tcatcccctacctctcgctctc 84
               ||||||||||||||||||||||
Sbjct: 4578330 tcatcccctacctctcgctctc 4578309

>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1297_C09
          Length = 163378

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 63     tcatcccctacctctcgctctc 84
              ||||||||||||||||||||||
Sbjct: 113709 tcatcccctacctctcgctctc 113688

>gb|AC090033.2| Felis catus clone RP86-523H23, complete sequence
          Length = 125267

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    agggttcccagcagccgccg 42
             ||||||||||||||||||||
Sbjct: 20944 agggttcccagcagccgccg 20925

>gb|AC087731.2| Felis catus clone RP86-459O8, complete sequence
          Length = 125661

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     agggttcccagcagccgccg 42
              ||||||||||||||||||||
Sbjct: 115261 agggttcccagcagccgccg 115242

>gb|AY389808.1| Rattus norvegicus Nhn1A mRNA, complete cds
          Length = 3228

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 74   ctctcgctctcgccccctctctcg 97
            ||||||||||||| ||||||||||
Sbjct: 1218 ctctcgctctcgctccctctctcg 1195

>gb|AY389807.1| Rattus norvegicus Nhn1B mRNA, complete cds
          Length = 3300

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 74   ctctcgctctcgccccctctctcg 97
            ||||||||||||| ||||||||||
Sbjct: 1290 ctctcgctctcgctccctctctcg 1267

>emb|CR387978.12| Zebrafish DNA sequence from clone DKEY-33M5 in linkage group 1, complete
              sequence
          Length = 208746

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    tgctcatttgcgttttcctc 151
              ||||||||||||||||||||
Sbjct: 204734 tgctcatttgcgttttcctc 204753

>gb|AC122043.4| Mus musculus BAC clone RP24-448C16 from chromosome 5, complete sequence
          Length = 187106

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 188    catctttgcgaggaggggat 207
              ||||||||||||||||||||
Sbjct: 152299 catctttgcgaggaggggat 152280

>emb|BX470266.10| Zebrafish DNA sequence from clone DKEYP-9D4 in linkage group 1, complete
              sequence
          Length = 194021

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    tgctcatttgcgttttcctc 151
              ||||||||||||||||||||
Sbjct: 130528 tgctcatttgcgttttcctc 130547

>ref|NM_201416.1| Rattus norvegicus conserved nuclear protein Nhn1 (Nhn1), mRNA
          Length = 3300

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 74   ctctcgctctcgccccctctctcg 97
            ||||||||||||| ||||||||||
Sbjct: 1290 ctctcgctctcgctccctctctcg 1267

>emb|AL079302.7|CNS00M8S Human chromosome 14 DNA sequence BAC R-1089B7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 204230

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 73    cctctcgctctcgccccctctctc 96
             |||||| |||||||||||||||||
Sbjct: 87584 cctctctctctcgccccctctctc 87607

>gb|AC099713.5| Mus musculus chromosome 15, clone RP23-447B6, complete sequence
          Length = 199130

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 74     ctctcgctctcgccccctctctcg 97
              ||||||||||||| ||||||||||
Sbjct: 129073 ctctcgctctcgctccctctctcg 129050

>emb|AL954727.4| Mouse DNA sequence from clone RP23-388H7 on chromosome X, complete
             sequence
          Length = 48764

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   cttttctccccttgatctat 129
             ||||||||||||||||||||
Sbjct: 21150 cttttctccccttgatctat 21131

>gb|U15663.1|OMU15663 Oncorhynchus mykiss recombination activating protein (RAG-1) gene,
            complete cds
          Length = 3888

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 74   ctctcgctctcgccccctctctcg 97
            ||||||||||| ||||||||||||
Sbjct: 1700 ctctcgctctcaccccctctctcg 1723


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,477,380
Number of Sequences: 3902068
Number of extensions: 1477380
Number of successful extensions: 107565
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107486
Number of HSP's gapped (non-prelim): 79
length of query: 209
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 187
effective length of database: 17,147,199,772
effective search space: 3206526357364
effective search space used: 3206526357364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)