>gb|AC119670.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007H22, complete sequence
          Length = 160938

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 381   tctgnaaaggttactaatctgaaggaattgcc 412
             |||| |||| ||||||||||||||||||||||
Sbjct: 82744 tctgaaaagattactaatctgaaggaattgcc 82713

>gb|AC119071.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0044D15 BAC genomic
              sequence, complete sequence
          Length = 144544

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 381    tctgnaaaggttactaatctgaaggaattgcc 412
              |||| |||| ||||||||||||||||||||||
Sbjct: 134955 tctgaaaagattactaatctgaaggaattgcc 134986

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 381     tctgnaaaggttactaatctgaaggaattgcc 412
               |||| |||| ||||||||||||||||||||||
Sbjct: 6804107 tctgaaaagattactaatctgaaggaattgcc 6804138



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 55/65 (84%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                           
Query: 381     tctgnaaaggttactaatctgaaggaattgccagctaaagttgaggaaataaag-agcaa 439
               |||| ||||||||||||| |||||||  ||||||  || || |||||||||| | |||||
Sbjct: 6556760 tctgaaaaggttactaatttgaaggagatgccagagaaggtcgaggaaataaggaagcaa 6556701

                    
Query: 440     ctgac 444
               |||||
Sbjct: 6556700 ctgac 6556696

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 381     tctgnaaaggttactaatctgaaggaattgcc 412
               |||| |||| ||||||||||||||||||||||
Sbjct: 6870574 tctgaaaagattactaatctgaaggaattgcc 6870605



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 55/65 (84%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                           
Query: 381     tctgnaaaggttactaatctgaaggaattgccagctaaagttgaggaaataaag-agcaa 439
               |||| ||||||||||||| |||||||  ||||||  || || |||||||||| | |||||
Sbjct: 6623227 tctgaaaaggttactaatttgaaggagatgccagagaaggtcgaggaaataaggaagcaa 6623168

                    
Query: 440     ctgac 444
               |||||
Sbjct: 6623167 ctgac 6623163

>gb|AF456245.1| Oryza sativa (japonica cultivar-group) NBS-LRR-like protein (YR5)
           mRNA, complete cds
          Length = 3134

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 55/65 (84%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                       
Query: 381 tctgnaaaggttactaatctgaaggaattgccagctaaagttgaggaaataaag-agcaa 439
           |||| ||||||||||||| |||||||  ||||||  || || |||||||||| | |||||
Sbjct: 247 tctgaaaaggttactaatttgaaggagatgccagagaaggtcgaggaaataaggaagcaa 306

                
Query: 440 ctgac 444
           |||||
Sbjct: 307 ctgac 311

>gb|AC119073.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0082N20 BAC genomic
             sequence, complete sequence
          Length = 138826

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 55/65 (84%), Gaps = 1/65 (1%)
 Strand = Plus / Minus

                                                                         
Query: 381   tctgnaaaggttactaatctgaaggaattgccagctaaagttgaggaaataaag-agcaa 439
             |||| ||||||||||||| |||||||  ||||||  || || |||||||||| | |||||
Sbjct: 15970 tctgaaaaggttactaatttgaaggagatgccagagaaggtcgaggaaataaggaagcaa 15911

                  
Query: 440   ctgac 444
             |||||
Sbjct: 15910 ctgac 15906

>gb|AY340168.1| Acanthophis pyrrhus isolate 1133 NADH dehydrogenase subunit 4 (ND4)
           gene, partial cds; mitochondrial gene for mitochondrial
           product
          Length = 648

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 70  aatcgccgcaatatccatcca 90
           |||||||||||||||||||||
Sbjct: 174 aatcgccgcaatatccatcca 194

>gb|AY340167.1| Acanthophis cf. laevis isolate 276 NADH dehydrogenase subunit 4
           (ND4) gene, partial cds; mitochondrial gene for
           mitochondrial product
          Length = 648

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 70  aatcgccgcaatatccatcca 90
           |||||||||||||||||||||
Sbjct: 174 aatcgccgcaatatccatcca 194

>gb|AY340166.1| Acanthophis cf. laevis isolate 1252 NADH dehydrogenase subunit 4
           (ND4) gene, partial cds; mitochondrial gene for
           mitochondrial product
          Length = 648

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 70  aatcgccgcaatatccatcca 90
           |||||||||||||||||||||
Sbjct: 174 aatcgccgcaatatccatcca 194

>gb|AY340165.1| Acanthophis cf. laevis isolate 1140 NADH dehydrogenase subunit 4
           (ND4) gene, partial cds; mitochondrial gene for
           mitochondrial product
          Length = 598

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 70  aatcgccgcaatatccatcca 90
           |||||||||||||||||||||
Sbjct: 125 aatcgccgcaatatccatcca 145

>gb|AY340163.1| Acanthophis antarcticus isolate 1192 NADH dehydrogenase subunit 4
           (ND4) gene, partial cds; mitochondrial gene for
           mitochondrial product
          Length = 638

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 70  aatcgccgcaatatccatcca 90
           |||||||||||||||||||||
Sbjct: 164 aatcgccgcaatatccatcca 184

>gb|AY340162.1| Acanthophis antarcticus isolate 1137 NADH dehydrogenase subunit 4
           (ND4) gene, partial cds; mitochondrial gene for
           mitochondrial product
          Length = 648

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 70  aatcgccgcaatatccatcca 90
           |||||||||||||||||||||
Sbjct: 174 aatcgccgcaatatccatcca 194


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,119,302
Number of Sequences: 3902068
Number of extensions: 3119302
Number of successful extensions: 49762
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49694
Number of HSP's gapped (non-prelim): 68
length of query: 444
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 422
effective length of database: 17,147,199,772
effective search space: 7236118303784
effective search space used: 7236118303784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)