>FUSC3_FUSCU (Q8J1X7) Allergen Fus c 3|
          Length = 450

 Score = 24.6 bits (52), Expect(2) = 1.5
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +1

Query: 85  HHPSHPLRIWTTTDHSQRHIRHHIYSRSPLHSTLSAS 195
           H PSHP  +     H Q H   H   R   HS  S++
Sbjct: 101 HAPSHPSHLSHGAPHEQEHA--HEIQRHRAHSAQSSA 135



 Score = 23.9 bits (50), Expect(2) = 1.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 25  PRRDAGDSARRPSVHSIFLYHHPSHP 102
           P R + ++  RP    I  +HH +HP
Sbjct: 39  PNRTSRNTPLRPESTEIETHHHANHP 64

>EXBD_SYNY3 (P72942) Putative biopolymer transport exbD protein|
          Length = 269

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +1

Query: 46  SARRPSVHSIFL-YHHPSHPLRIWTTTDHSQRHIRHHI 156
           S + P  H  F   +HP+ PL +W    H Q  +R  I
Sbjct: 4   SPKAPKSHRKFQSIYHPTRPLSLWQDNQHDQGEVRIEI 41

>SUVR3_ARATH (Q9SRV2) Histone-lysine N-methyltransferase SUVR3 (EC 2.1.1.43)|
           (Suppressor of variegation 3-9-related protein 3)
           (Su(var)3-9-related protein 3) (Protein SET DOMAIN GROUP
           20)
          Length = 338

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 214 RCLGFLDWRRVWSEVASGCRCGAVC 140
           +CL F     + +E  SGC CG+ C
Sbjct: 156 KCLAFAGMEEIANECGSGCGCGSDC 180

>ODP2_NEUCR (P20285) Dihydrolipoyllysine-residue acetyltransferase component of|
           pyruvate dehydrogenase complex, mitochondrial precursor
           (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase
           component of pyruvate dehydrogenase complex) (PDC-E2)
           (MRP3)
          Length = 458

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 325 PVVAPRRAQGGQGTWTARPGDR 390
           P ++P    GG G W  +PGD+
Sbjct: 40  PALSPTMTSGGIGAWQKKPGDK 61

>DYHC_SCHPO (O13290) Dynein heavy chain, cytosolic (DYHC)|
          Length = 4196

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +1

Query: 55   RPSVHSIFLYHHPSHPLRIWTTTDHSQRHIR--HHIYSRSPLHSTLSAS 195
            RP + S++   + SHP       D +  HI   H I + S +H+ L  S
Sbjct: 2813 RPKLESLYKKFYSSHPNNTLVFVDETITHILRFHRILNNSGMHALLQGS 2861

>YNB2_SCHPO (Q9USS8) Hypothetical protein C4.02c in chromosome II|
          Length = 456

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 122 VVVQMRRGWDGWWYKKM 72
           V V+ +R W+GWW +K+
Sbjct: 100 VEVEEKRAWEGWWNEKI 116

>YHP6_SCHPO (Q9USP7) Protein C902.06 in chromosome II|
          Length = 397

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
 Frame = +1

Query: 25  PRRDAGDSARRPSVH------SIFLYHH--PSHPLRIWTTTDHSQRHIRHHIYSRSPLHS 180
           P+R A DS  RPS+H      S+ L  +    H +R    +D S+ H + H +S  P   
Sbjct: 277 PQRMASDSYGRPSLHLNDPFPSVDLQSNELSHHNVRTTLFSDDSRFHSKIHTHSTPPSQM 336

Query: 181 TLSAS 195
             +AS
Sbjct: 337 YSAAS 341


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,267,775
Number of Sequences: 219361
Number of extensions: 540728
Number of successful extensions: 2039
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2031
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)