ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl27e04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK073769.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 2e-64
2ref|XM_462853.1| Oryza sativa (japonica cultivar-group), predic... 121 2e-24
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
4dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
5dbj|AP002881.2| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
6gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome... 60 8e-06
7gb|AC104281.2| Oryza sativa (japonica cultivar-group) chromosome... 60 8e-06
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
9gb|AC124475.3| Mus musculus BAC clone RP24-92F8 from chromosome ... 42 1.8
10emb|BX663614.24| Zebrafish DNA sequence from clone DKEY-148L2 in... 42 1.8
11emb|AL845433.4| Human DNA sequence from clone RP11-674N8 on chro... 42 1.8
12gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.8
13gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 1.8
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
15dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
16dbj|AP005501.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
17ref|XM_477714.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.0
18gb|BC017700.2| Homo sapiens zinc finger and BTB domain containin... 40 7.0
19ref|XM_616848.2| PREDICTED: Bos taurus similar to ecotropic vira... 40 7.0
20gb|AC137942.6| Mus musculus chromosome 10, clone RP24-502K6, com... 40 7.0
21gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 7.0
22gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequ... 40 7.0
23gb|AC091170.15| Homo sapiens chromosome 18, clone RP11-879D5, co... 40 7.0
24gb|AF378292.1| Schizophyllum commune mating pheromone receptor B... 40 7.0
25gb|AY394467.1| Streptomyces sp. MA5969 clone ASA2 ketosynthase a... 40 7.0
26gb|AC158212.3| Mus musculus chromosome 7, clone RP24-288P9, comp... 40 7.0
27gb|AC160535.3| Mus musculus chromosome 7, clone RP24-298A23, com... 40 7.0
28gb|AF165097.1| Homo sapiens FANCC-interacting protein (FAZF) mRN... 40 7.0
29emb|AJ494748.2|SSC494748 Sus scrofa C3 gene for complement C3 pr... 40 7.0
30emb|AL929183.14| Zebrafish DNA sequence from clone CH211-142M8 i... 40 7.0
31gb|AD000671.1| Homo sapiens DNA from chromosome 19-cosmid f24109... 40 7.0
32gb|AC111051.26| Mus musculus chromosome 7, clone RP24-163C20, co... 40 7.0
33dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
34gb|AC152455.1| Pan troglodytes BAC clone RP43-4I15 from chromoso... 40 7.0
35emb|BX005464.7| Zebrafish DNA sequence from clone DKEY-24J21, co... 40 7.0
36dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
37dbj|AP004349.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
38gb|AF148501.1|AF148501 Schizophyllum commune B beta2 mating-type... 40 7.0
39gb|AF130255.1|AF130255 Homo sapiens testis zinc finger protein m... 40 7.0
40emb|BX664720.7| Zebrafish DNA sequence from clone DKEYP-4H4 in l... 40 7.0
41dbj|AP002791.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.0
42ref|NM_014383.1| Homo sapiens zinc finger and BTB domain contain... 40 7.0
43gb|AC153964.3| Mus musculus 10 BAC RP24-399H20 (Roswell Park Can... 40 7.0 
>dbj|AK073769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067N09, full
           insert sequence
          Length = 3758

 Score =  254 bits (128), Expect = 2e-64
 Identities = 240/276 (86%), Gaps = 1/276 (0%)
 Strand = Plus / Plus

                                                                       
Query: 240 gatgtcggcggcggtcgaggagcagatggtagtgaaagcgatccgggaggagtgcccgtg 299
           |||| ||||| |||| |||||||||||||| || || || ||||||||||||||||| ||
Sbjct: 245 gatggcggcgacggtggaggagcagatggtggtcaaggccatccgggaggagtgcccatg 304

                                                                       
Query: 300 ggagtccctccccaagcgtctccagtccactctccacaacaaggacaagtggcaccgcag 359
           |||||| ||||||||||| ||||||||||| ||||||| ||||||  | |||||||||||
Sbjct: 305 ggagtcgctccccaagcgcctccagtccacgctccacaccaaggaggaatggcaccgcag 364

                                                                       
Query: 360 gattgtagattattgcatccgaaaacgattacaatggaatacctgctttgcccgtcgagt 419
           |||||| ||||| ||||||||||||||||||||||||||||| || ||||| ||| ||||
Sbjct: 365 gattgtggattactgcatccgaaaacgattacaatggaatacttgttttgctcgtagagt 424

                                                                       
Query: 420 ttacagggaaggggaatactatgaagaaatgatgcactatcttcggcgtaatcttgcatt 479
            | |||||||||||| |||||||| ||||||||| | || || ||| | |||||||||||
Sbjct: 425 gtgcagggaaggggagtactatgaggaaatgatgaaatacctccggaggaatcttgcatt 484

                                               
Query: 480 atatccataccatc-tgcagactatatatgccgagt 514
           ||| || || |||| |||||||||||| ||||||||
Sbjct: 485 atacccgtatcatcttgcagactatatctgccgagt 520
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>ref|XM_462853.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 540

 Score =  121 bits (61), Expect = 2e-24
 Identities = 106/121 (87%)
 Strand = Plus / Plus

                                                                       
Query: 240 gatgtcggcggcggtcgaggagcagatggtagtgaaagcgatccgggaggagtgcccgtg 299
           |||| ||||| |||| |||||||||||||| || || || ||||||||||||||||| ||
Sbjct: 336 gatggcggcgacggtggaggagcagatggtggtcaaggccatccgggaggagtgcccatg 395

                                                                       
Query: 300 ggagtccctccccaagcgtctccagtccactctccacaacaaggacaagtggcaccgcag 359
           |||||| ||||||||||| ||||||||||| ||||||| ||||||  | |||||||||||
Sbjct: 396 ggagtcgctccccaagcgcctccagtccacgctccacaccaaggaggaatggcaccgcag 455

            
Query: 360 g 360
           |
Sbjct: 456 g 456
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  121 bits (61), Expect = 2e-24
 Identities = 106/121 (87%)
 Strand = Plus / Plus

                                                                            
Query: 240      gatgtcggcggcggtcgaggagcagatggtagtgaaagcgatccgggaggagtgcccgtg 299
                |||| ||||| |||| |||||||||||||| || || || ||||||||||||||||| ||
Sbjct: 11210173 gatggcggcgacggtggaggagcagatggtggtcaaggccatccgggaggagtgcccatg 11210232

                                                                            
Query: 300      ggagtccctccccaagcgtctccagtccactctccacaacaaggacaagtggcaccgcag 359
                |||||| ||||||||||| ||||||||||| ||||||| ||||||  | |||||||||||
Sbjct: 11210233 ggagtcgctccccaagcgcctccagtccacgctccacaccaaggaggaatggcaccgcag 11210292

                 
Query: 360      g 360
                |
Sbjct: 11210293 g 11210293



 Score =  115 bits (58), Expect = 1e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                            
Query: 356      gcaggattgtagattattgcatccgaaaacgattacaatggaatacctgctttgcccgtc 415
                |||||||||| ||||| ||||||||||||||||||||||||||||| || ||||| ||| 
Sbjct: 11211631 gcaggattgtggattactgcatccgaaaacgattacaatggaatacttgttttgctcgta 11211690

                                                      
Query: 416      gagtttacagggaaggggaatactatgaagaaatgatg 453
                |||| | |||||||||||| |||||||| |||||||||
Sbjct: 11211691 gagtgtgcagggaaggggagtactatgaggaaatgatg 11211728
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>dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1146F03
          Length = 137047

 Score =  121 bits (61), Expect = 2e-24
 Identities = 106/121 (87%)
 Strand = Plus / Plus

                                                                          
Query: 240    gatgtcggcggcggtcgaggagcagatggtagtgaaagcgatccgggaggagtgcccgtg 299
              |||| ||||| |||| |||||||||||||| || || || ||||||||||||||||| ||
Sbjct: 101966 gatggcggcgacggtggaggagcagatggtggtcaaggccatccgggaggagtgcccatg 102025

                                                                          
Query: 300    ggagtccctccccaagcgtctccagtccactctccacaacaaggacaagtggcaccgcag 359
              |||||| ||||||||||| ||||||||||| ||||||| ||||||  | |||||||||||
Sbjct: 102026 ggagtcgctccccaagcgcctccagtccacgctccacaccaaggaggaatggcaccgcag 102085

               
Query: 360    g 360
              |
Sbjct: 102086 g 102086



 Score =  115 bits (58), Expect = 1e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                          
Query: 356    gcaggattgtagattattgcatccgaaaacgattacaatggaatacctgctttgcccgtc 415
              |||||||||| ||||| ||||||||||||||||||||||||||||| || ||||| ||| 
Sbjct: 103424 gcaggattgtggattactgcatccgaaaacgattacaatggaatacttgttttgctcgta 103483

                                                    
Query: 416    gagtttacagggaaggggaatactatgaagaaatgatg 453
              |||| | |||||||||||| |||||||| |||||||||
Sbjct: 103484 gagtgtgcagggaaggggagtactatgaggaaatgatg 103521
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>dbj|AP002881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0035H10
          Length = 109475

 Score =  121 bits (61), Expect = 2e-24
 Identities = 106/121 (87%)
 Strand = Plus / Plus

                                                                          
Query: 240    gatgtcggcggcggtcgaggagcagatggtagtgaaagcgatccgggaggagtgcccgtg 299
              |||| ||||| |||| |||||||||||||| || || || ||||||||||||||||| ||
Sbjct: 108906 gatggcggcgacggtggaggagcagatggtggtcaaggccatccgggaggagtgcccatg 108965

                                                                          
Query: 300    ggagtccctccccaagcgtctccagtccactctccacaacaaggacaagtggcaccgcag 359
              |||||| ||||||||||| ||||||||||| ||||||| ||||||  | |||||||||||
Sbjct: 108966 ggagtcgctccccaagcgcctccagtccacgctccacaccaaggaggaatggcaccgcag 109025

               
Query: 360    g 360
              |
Sbjct: 109026 g 109026
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>gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0036C12, complete sequence
          Length = 145517

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 356   gcaggattgtagattattgcatccgaaaacgatt 389
             |||||||||||||||||||||| |||||||||||
Sbjct: 19673 gcaggattgtagattattgcatacgaaaacgatt 19706



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                         
Query: 240   gatgtcggcggcggtcgaggagcagatggtagtgaaagcgatccgggaggagtgcccgtg 299
             |||| ||||| |||| |||||||||||| | ||||| |||||| ||||||||  ||| ||
Sbjct: 18954 gatggcggcgacggtggaggagcagatgatggtgaaggcgatcagggaggagctcccatg 19013

                               
Query: 300   ggagtccctccccaagcg 317
             ||||  ||||||||||||
Sbjct: 19014 ggagagcctccccaagcg 19031
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>gb|AC104281.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1537_B05,
              complete sequence
          Length = 129890

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                
Query: 356    gcaggattgtagattattgcatccgaaaacgatt 389
              |||||||||||||||||||||| |||||||||||
Sbjct: 105179 gcaggattgtagattattgcatacgaaaacgatt 105212



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                          
Query: 240    gatgtcggcggcggtcgaggagcagatggtagtgaaagcgatccgggaggagtgcccgtg 299
              |||| ||||| |||| |||||||||||| | ||||| |||||| ||||||||  ||| ||
Sbjct: 104460 gatggcggcgacggtggaggagcagatgatggtgaaggcgatcagggaggagctcccatg 104519

                                
Query: 300    ggagtccctccccaagcg 317
              ||||  ||||||||||||
Sbjct: 104520 ggagagcctccccaagcg 104537
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                  
Query: 356      gcaggattgtagattattgcatccgaaaacgatt 389
                |||||||||||||||||||||| |||||||||||
Sbjct: 16695563 gcaggattgtagattattgcatacgaaaacgatt 16695596



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                            
Query: 240      gatgtcggcggcggtcgaggagcagatggtagtgaaagcgatccgggaggagtgcccgtg 299
                |||| ||||| |||| |||||||||||| | ||||| |||||| ||||||||  ||| ||
Sbjct: 16694844 gatggcggcgacggtggaggagcagatgatggtgaaggcgatcagggaggagctcccatg 16694903

                                  
Query: 300      ggagtccctccccaagcg 317
                ||||  ||||||||||||
Sbjct: 16694904 ggagagcctccccaagcg 16694921
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>gb|AC124475.3| Mus musculus BAC clone RP24-92F8 from chromosome 8, complete sequence
          Length = 212858

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 434   aatactatgaagaaatgatgc 454
             |||||||||||||||||||||
Sbjct: 65045 aatactatgaagaaatgatgc 65065
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>emb|BX663614.24| Zebrafish DNA sequence from clone DKEY-148L2 in linkage group 6,
             complete sequence
          Length = 191715

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 438   ctatgaagaaatgatgcacta 458
             |||||||||||||||||||||
Sbjct: 87667 ctatgaagaaatgatgcacta 87647
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>emb|AL845433.4| Human DNA sequence from clone RP11-674N8 on chromosome X Contains a
              chromobox homolog 5 (HP1 alpha homolog, Drosophila) (CBX5)
              pseudogene, the 5' end of the NHS gene for Nance-Horan
              syndrome (congenital cataracts and dental anomalies) and
              two CpG islands, complete sequence
          Length = 200476

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 138    tccctagcccccttcccactc 158
              |||||||||||||||||||||
Sbjct: 105657 tccctagcccccttcccactc 105637
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 245     cggcggcggtcgaggagcaga 265
               |||||||||||||||||||||
Sbjct: 4556464 cggcggcggtcgaggagcaga 4556444
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 240     gatgtcggcggcggtcgagga 260
               |||||||||||||||||||||
Sbjct: 3659168 gatgtcggcggcggtcgagga 3659148
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 308     tccccaagcgtctccagtccactctccac 336
               |||| ||||||||||||||| ||||||||
Sbjct: 4054492 tccctaagcgtctccagtcccctctccac 4054520
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>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0462E11
          Length = 166115

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 308    tccccaagcgtctccagtccactctccac 336
              |||| ||||||||||||||| ||||||||
Sbjct: 141789 tccctaagcgtctccagtcccctctccac 141817
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>dbj|AP005501.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0458D06
          Length = 166038

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 308   tccccaagcgtctccagtccactctccac 336
             |||| ||||||||||||||| ||||||||
Sbjct: 47605 tccctaagcgtctccagtcccctctccac 47633
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>ref|XM_477714.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 609

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 243 gtcggcggcggtcgaggagc 262
           ||||||||||||||||||||
Sbjct: 213 gtcggcggcggtcgaggagc 232
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>gb|BC017700.2| Homo sapiens zinc finger and BTB domain containing 32, mRNA (cDNA
           clone MGC:21109 IMAGE:4419776), complete cds
          Length = 1773

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 131 cgcaagctccctagcccccttccc 154
           |||||||||||| |||||||||||
Sbjct: 805 cgcaagctccctggcccccttccc 828
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>ref|XM_616848.2| PREDICTED: Bos taurus similar to ecotropic viral integration site 5
            (LOC536706), mRNA
          Length = 2778

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 261  gcagatggtagtgaaagcga 280
            ||||||||||||||||||||
Sbjct: 2665 gcagatggtagtgaaagcga 2684
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>gb|AC137942.6| Mus musculus chromosome 10, clone RP24-502K6, complete sequence
          Length = 173848

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 482   atccataccatctgcagact 501
             ||||||||||||||||||||
Sbjct: 58747 atccataccatctgcagact 58766
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 239     cgatgtcggcggcggtcgag 258
               ||||||||||||||||||||
Sbjct: 2115068 cgatgtcggcggcggtcgag 2115087
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>gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequence
          Length = 157884

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   tctccagtccactctccaca 337
             ||||||||||||||||||||
Sbjct: 19892 tctccagtccactctccaca 19911
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>gb|AC091170.15| Homo sapiens chromosome 18, clone RP11-879D5, complete sequence
          Length = 198586

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    ctccccaccctcagcacagc 92
             ||||||||||||||||||||
Sbjct: 51993 ctccccaccctcagcacagc 52012
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>gb|AF378292.1| Schizophyllum commune mating pheromone receptor Bbr2 (bbr2) gene,
            complete cds
          Length = 2986

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  tgtcggcggcggtcgaggag 261
            ||||||||||||||||||||
Sbjct: 1597 tgtcggcggcggtcgaggag 1578
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>gb|AY394467.1| Streptomyces sp. MA5969 clone ASA2 ketosynthase and chain length
           factor genes, partial cds
          Length = 792

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 243 gtcggcggcggtcgaggagc 262
           ||||||||||||||||||||
Sbjct: 545 gtcggcggcggtcgaggagc 564
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>gb|AC158212.3| Mus musculus chromosome 7, clone RP24-288P9, complete sequence
          Length = 161314

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   tactatgaagaaatgatgca 455
             ||||||||||||||||||||
Sbjct: 23417 tactatgaagaaatgatgca 23436
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>gb|AC160535.3| Mus musculus chromosome 7, clone RP24-298A23, complete sequence
          Length = 163688

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   tactatgaagaaatgatgca 455
             ||||||||||||||||||||
Sbjct: 18096 tactatgaagaaatgatgca 18077
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>gb|AF165097.1| Homo sapiens FANCC-interacting protein (FAZF) mRNA, complete cds
          Length = 1464

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 131 cgcaagctccctagcccccttccc 154
           |||||||||||| |||||||||||
Sbjct: 679 cgcaagctccctggcccccttccc 702
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>emb|AJ494748.2|SSC494748 Sus scrofa C3 gene for complement C3 precursor, exons 1-41 and promoter
          Length = 34754

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    cccaccctcagcacagcgac 95
             ||||||||||||||||||||
Sbjct: 32444 cccaccctcagcacagcgac 32425
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>emb|AL929183.14| Zebrafish DNA sequence from clone CH211-142M8 in linkage group 25,
              complete sequence
          Length = 180603

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    caccacacacgctcaccaag 219
              ||||||||||||||||||||
Sbjct: 161122 caccacacacgctcaccaag 161141
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>gb|AD000671.1| Homo sapiens DNA from chromosome 19-cosmid f24109 containing HRX2,
             genomic sequence
          Length = 46251

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 131   cgcaagctccctagcccccttccc 154
             |||||||||||| |||||||||||
Sbjct: 10816 cgcaagctccctggcccccttccc 10839
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>gb|AC111051.26| Mus musculus chromosome 7, clone RP24-163C20, complete sequence
          Length = 166456

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   tactatgaagaaatgatgca 455
             ||||||||||||||||||||
Sbjct: 74211 tactatgaagaaatgatgca 74192
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 243      gtcggcggcggtcgaggagc 262
                ||||||||||||||||||||
Sbjct: 13433048 gtcggcggcggtcgaggagc 13433029
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>gb|AC152455.1| Pan troglodytes BAC clone RP43-4I15 from chromosome 7, complete
            sequence
          Length = 136468

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 134  aagctccctagcccccttcccact 157
            |||||||| |||||||||||||||
Sbjct: 1164 aagctcccaagcccccttcccact 1141
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>emb|BX005464.7| Zebrafish DNA sequence from clone DKEY-24J21, complete sequence
          Length = 199639

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    caccacacacgctcaccaag 219
              ||||||||||||||||||||
Sbjct: 142292 caccacacacgctcaccaag 142273
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>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1123E10
          Length = 134641

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   gtcggcggcggtcgaggagc 262
             ||||||||||||||||||||
Sbjct: 12731 gtcggcggcggtcgaggagc 12712
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>dbj|AP004349.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0684A03
          Length = 64705

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   gtcggcggcggtcgaggagc 262
             ||||||||||||||||||||
Sbjct: 58807 gtcggcggcggtcgaggagc 58788
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>gb|AF148501.1|AF148501 Schizophyllum commune B beta2 mating-type pheromone receptor (bbr2)
            mRNA, complete cds
          Length = 2514

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  tgtcggcggcggtcgaggag 261
            ||||||||||||||||||||
Sbjct: 1172 tgtcggcggcggtcgaggag 1153
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>gb|AF130255.1|AF130255 Homo sapiens testis zinc finger protein mRNA, complete cds
          Length = 1960

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 131 cgcaagctccctagcccccttccc 154
           |||||||||||| |||||||||||
Sbjct: 889 cgcaagctccctggcccccttccc 912
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>emb|BX664720.7| Zebrafish DNA sequence from clone DKEYP-4H4 in linkage group 22,
             complete sequence
          Length = 121320

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 434   aatactatgaagaaatgatg 453
             ||||||||||||||||||||
Sbjct: 13883 aatactatgaagaaatgatg 13864
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>dbj|AP002791.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-843F11, complete
             sequences
          Length = 172914

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   tctccagtccactctccaca 337
             ||||||||||||||||||||
Sbjct: 38815 tctccagtccactctccaca 38834
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>ref|NM_014383.1| Homo sapiens zinc finger and BTB domain containing 32 (ZBTB32),
           mRNA
          Length = 1960

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 131 cgcaagctccctagcccccttccc 154
           |||||||||||| |||||||||||
Sbjct: 889 cgcaagctccctggcccccttccc 912
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>gb|AC153964.3| Mus musculus 10 BAC RP24-399H20 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 173453

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 482    atccataccatctgcagact 501
              ||||||||||||||||||||
Sbjct: 138458 atccataccatctgcagact 138477


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,458,861
Number of Sequences: 3902068
Number of extensions: 3458861
Number of successful extensions: 63773
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63467
Number of HSP's gapped (non-prelim): 305
length of query: 518
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 495
effective length of database: 17,143,297,704
effective search space: 8485932363480
effective search space used: 8485932363480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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