ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl27d12 |
|---|---|
| Clone Library Name | barley_pub |
>PLDA2_ORYSA (P93844) Phospholipase D alpha 2 (EC 3.1.4.4) (PLD alpha 2)| (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 818 Score = 85.9 bits (211), Expect = 2e-17 Identities = 40/54 (74%), Positives = 48/54 (88%) Frame = +2 Query: 116 MAHRLLHGTLHATILEADNLTNPDRATGGAPQIFRRFVEGFEETIGRGKGSTQL 277 MAH LLHGTL ATILEAD+L+NP RATG AP IFR+FVEGFE+++G GKG+T+L Sbjct: 1 MAHLLLHGTLEATILEADHLSNPTRATGAAPGIFRKFVEGFEDSLGLGKGATRL 54
>PLDA1_MAIZE (Q43270) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 812 Score = 78.2 bits (191), Expect = 5e-15 Identities = 35/54 (64%), Positives = 45/54 (83%) Frame = +2 Query: 116 MAHRLLHGTLHATILEADNLTNPDRATGGAPQIFRRFVEGFEETIGRGKGSTQL 277 MA LLHGTLHATI EA++L+NP RATGGAP+ R+ VEG E+T+G GKG+T++ Sbjct: 1 MAQILLHGTLHATIFEAESLSNPHRATGGAPKFIRKLVEGIEDTVGVGKGATKI 54
>PLDA1_ORYSA (Q43007) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha| 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 812 Score = 75.5 bits (184), Expect = 3e-14 Identities = 34/54 (62%), Positives = 44/54 (81%) Frame = +2 Query: 116 MAHRLLHGTLHATILEADNLTNPDRATGGAPQIFRRFVEGFEETIGRGKGSTQL 277 MA LLHGTLHATI EA +L+NP RA+G AP+ R+FVEG E+T+G GKG+T++ Sbjct: 1 MAQMLLHGTLHATIFEAASLSNPHRASGSAPKFIRKFVEGIEDTVGVGKGATKV 54
>PLDA1_RICCO (Q41142) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 53.9 bits (128), Expect = 1e-07 Identities = 28/54 (51%), Positives = 33/54 (61%) Frame = +2 Query: 116 MAHRLLHGTLHATILEADNLTNPDRATGGAPQIFRRFVEGFEETIGRGKGSTQL 277 MA LHGTLH TI E D L + GG P FR+ VE EET+G GKG ++L Sbjct: 1 MAQISLHGTLHVTIYEVDKLHS-----GGGPHFFRKLVENIEETVGFGKGVSKL 49
>PLDA1_BRAOC (O82549) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 810 Score = 50.1 bits (118), Expect = 1e-06 Identities = 28/54 (51%), Positives = 32/54 (59%) Frame = +2 Query: 116 MAHRLLHGTLHATILEADNLTNPDRATGGAPQIFRRFVEGFEETIGRGKGSTQL 277 MA LLHGTLHATI E D+L +G F + + EETIG GKG TQL Sbjct: 1 MAQHLLHGTLHATIYEVDDLHTGGLRSG----FFGKILANVEETIGVGKGETQL 50
>PLDA1_VIGUN (O04865) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 809 Score = 49.7 bits (117), Expect = 2e-06 Identities = 27/54 (50%), Positives = 31/54 (57%) Frame = +2 Query: 116 MAHRLLHGTLHATILEADNLTNPDRATGGAPQIFRRFVEGFEETIGRGKGSTQL 277 MA LLHGTLHATI E D L GG F + + EET+G GKG T+L Sbjct: 1 MAQILLHGTLHATIYEVDELHG-----GGGGNFFSKLKQNIEETVGIGKGVTKL 49
>PLDA2_BRAOC (P55939) Phospholipase D alpha 2 precursor (EC 3.1.4.4) (PLD 2)| (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 812 Score = 48.1 bits (113), Expect = 6e-06 Identities = 27/54 (50%), Positives = 30/54 (55%) Frame = +2 Query: 116 MAHRLLHGTLHATILEADNLTNPDRATGGAPQIFRRFVEGFEETIGRGKGSTQL 277 MA LLHGTLHATI E D L + G + + EETIG GKG TQL Sbjct: 1 MAQHLLHGTLHATIYEVDALHTGGLRSAG---FLGKIISNVEETIGFGKGETQL 51
>PLDA1_ARATH (Q38882) Phospholipase D alpha 1 (EC 3.1.4.4) (AtPLDalpha1) (PLD| alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) (PLDalpha) Length = 810 Score = 47.8 bits (112), Expect = 7e-06 Identities = 30/55 (54%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Frame = +2 Query: 116 MAHRLLHGTLHATILEADNLTNPDRATGGAPQIF-RRFVEGFEETIGRGKGSTQL 277 MA LLHGTLHATI E D L GG Q F + + EETIG GKG TQL Sbjct: 1 MAQHLLHGTLHATIYEVDALHG-----GGVRQGFLGKILANVEETIGVGKGETQL 50
>PLDA2_ARATH (Q9SSQ9) Phospholipase D alpha 2 (EC 3.1.4.4) (AtPLDalpha2) (PLD| alpha 2) (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 810 Score = 45.8 bits (107), Expect = 3e-05 Identities = 27/54 (50%), Positives = 29/54 (53%) Frame = +2 Query: 116 MAHRLLHGTLHATILEADNLTNPDRATGGAPQIFRRFVEGFEETIGRGKGSTQL 277 M LLHG LHATI E D+L A GG + EETIG GKG TQL Sbjct: 1 MEECLLHGRLHATIYEVDHL----HAEGGRSGFLGSILANVEETIGVGKGETQL 50
>PLDA1_TOBAC (P93400) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 45.8 bits (107), Expect = 3e-05 Identities = 26/51 (50%), Positives = 28/51 (54%) Frame = +2 Query: 116 MAHRLLHGTLHATILEADNLTNPDRATGGAPQIFRRFVEGFEETIGRGKGS 268 MA LLHGTLH TI E DNL G F + E EETIG GKG+ Sbjct: 1 MAQILLHGTLHVTIYEVDNLQKE-----GGGHFFSKIKEHVEETIGFGKGT 46
>PLDA1_PIMBR (O04883) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 32.0 bits (71), Expect = 0.42 Identities = 14/20 (70%), Positives = 15/20 (75%) Frame = +2 Query: 116 MAHRLLHGTLHATILEADNL 175 MA LLHGTLH TI E D+L Sbjct: 1 MAKTLLHGTLHVTIFEVDHL 20
>DBP10_YARLI (Q6C7X8) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 926 Score = 29.3 bits (64), Expect = 2.7 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 6/39 (15%) Frame = -2 Query: 103 VSPPPPKSELQA------SRVTVETRDGRNNAPRRAGQG 5 + P PKSEL++ SR+ E R +N P R G+G Sbjct: 875 IQKPQPKSELKSTADVRKSRILAEKRKQKNARPSRGGRG 913
>ALL7_ASPFU (O42799) Allergen Asp f 7 precursor| Length = 270 Score = 28.5 bits (62), Expect = 4.6 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Frame = -3 Query: 267 DPLPRPIVSSNPSTNL--RKIWGAPPVARSGLVRLSASKMVAWRVPCS 130 +P P+P ++ PST+ + APP A SG +AS + PCS Sbjct: 122 EPAPQPATTAAPSTSTTTQAAPSAPPAANSGSTEKAASS--GYSGPCS 167
>SUV92_MOUSE (Q9EQQ0) Histone-lysine N-methyltransferase, H3 lysine-9 specific 2| (EC 2.1.1.43) (Histone H3-K9 methyltransferase 2) (H3-K9-HMTase 2) (Suppressor of variegation 3-9 homolog 2) (Su(var)3-9 homolog 2) Length = 477 Score = 28.1 bits (61), Expect = 6.1 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 5/42 (11%) Frame = -2 Query: 121 SHCCRAVSPPP-PKSELQASRVTVETRDGRNNAP----RRAG 11 + C RA PPP PK+ A R ET R + P RRAG Sbjct: 15 ARCHRAPGPPPRPKARRTARRRRAETLTARRSRPSAGERRAG 56
>SWR1_NEUCR (Q7S133) Helicase swr-1 (EC 3.6.1.-)| Length = 1845 Score = 28.1 bits (61), Expect = 6.1 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -2 Query: 97 PPPPKSELQASRVTVETRDGRNNAPRRA 14 PPPPK+ + S T ETR + + RR+ Sbjct: 253 PPPPKAPARKSATTHETRPSASRSRRRS 280
>TRA1_CAEBR (Q17308) Sex-determining transformer protein 1| Length = 1165 Score = 27.7 bits (60), Expect = 7.9 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +2 Query: 170 NLTNPDRATGGAPQIFRRFVEGFEETIGRG 259 N N D GG P + + EGFEE+I +G Sbjct: 846 NYCNSDLPIGGRPILSVSYDEGFEESIDQG 875
>ALG1_ASHGO (Q75BA5) Chitobiosyldiphosphodolichol beta-mannosyltransferase (EC| 2.4.1.142) (GDP-mannose-dolichol diphosphochitobiose mannosyltransferase) (GDP-Man:GlcNAc2-PP-dolichol mannosyltransferase) (Beta-1,4-mannosyltransferase) (Asparagine-linked gl Length = 471 Score = 27.7 bits (60), Expect = 7.9 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -2 Query: 112 CRAVSPPPPKSELQASRVTVETRDGRNNAPRRAGQ 8 C + PPK L RVT+ G +NA + GQ Sbjct: 96 CGYLEEQPPKDLLDDPRVTIRALPGASNAGKSLGQ 130 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,623,977 Number of Sequences: 219361 Number of extensions: 638874 Number of successful extensions: 2393 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2325 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2383 length of database: 80,573,946 effective HSP length: 68 effective length of database: 65,657,398 effective search space used: 1575777552 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
