ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl27d10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related pr... 61 6e-10
2DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related pr... 59 2e-09
3MRP8_ARATH (Q8VZZ4) Multidrug resistance-associated protein 8 (E... 30 1.4
4MRP11_ARATH (Q9SKX0) Multidrug resistance-associated protein 11 ... 30 1.4
5MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (E... 30 1.8
6MRP3_ARATH (Q9LK64) Multidrug resistance-associated protein 3 (E... 29 3.2
7GIMA7_HUMAN (Q8NHV1) GTPase, IMAP family member 7 (Immunity-asso... 28 7.0
8MGM1_YEAST (P32266) Protein MGM1, mitochondrial precursor [Conta... 28 7.0
9MRP10_ARATH (Q9LZJ5) Multidrug resistance-associated protein 10 ... 28 7.0
10SPN1_SCHPO (O36023) Septin homolog spn1 27 9.2
11MRP9_ARATH (Q9M1C7) Multidrug resistance-associated protein 9 (E... 27 9.2

>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)|
           (Dynamin-like protein 6)
          Length = 914

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 32/60 (53%), Positives = 38/60 (63%)
 Frame = +3

Query: 201 MEAMEELSQLSESIRQXXXXXXXXXXXXXXXXXXXXTFLNAVVLGNVGSGKSAVLNSLIG 380
           MEA++ELSQLS+S++Q                    TFLN V LGNVG+GKSAVLNSLIG
Sbjct: 1   MEAIDELSQLSDSMKQAASLLADEDPDETSSSKRPATFLNVVALGNVGAGKSAVLNSLIG 60



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>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)|
           (Dynamin-like protein 3)
          Length = 920

 Score = 59.3 bits (142), Expect = 2e-09
 Identities = 32/60 (53%), Positives = 37/60 (61%)
 Frame = +3

Query: 201 MEAMEELSQLSESIRQXXXXXXXXXXXXXXXXXXXXTFLNAVVLGNVGSGKSAVLNSLIG 380
           MEA++ELSQLS+S+RQ                    T LN V LGNVG+GKSAVLNSLIG
Sbjct: 1   MEAIDELSQLSDSMRQAASLLADEDPDETSSSRRPATSLNVVALGNVGAGKSAVLNSLIG 60



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>MRP8_ARATH (Q8VZZ4) Multidrug resistance-associated protein 8 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 8)
           (ATP-energized glutathione S-conjugate pump 8)
          Length = 1466

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +3

Query: 315 LNAVVLGNVGSGKSAVLNSLIG 380
           +N  + G VGSGKS++L+S++G
Sbjct: 630 MNVAICGTVGSGKSSLLSSILG 651



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>MRP11_ARATH (Q9SKX0) Multidrug resistance-associated protein 11 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 11)
           (ATP-energized glutathione S-conjugate pump 11)
          Length = 1194

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = +3

Query: 327 VLGNVGSGKSAVLNSLIG 380
           V+G VGSGK+++LNSL+G
Sbjct: 384 VIGEVGSGKTSLLNSLLG 401



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>MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 7)
           (ATP-energized glutathione S-conjugate pump 7)
          Length = 1493

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +3

Query: 315 LNAVVLGNVGSGKSAVLNSLIG 380
           +N  + G VGSGKS++L+S++G
Sbjct: 653 MNIAICGTVGSGKSSLLSSILG 674



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>MRP3_ARATH (Q9LK64) Multidrug resistance-associated protein 3 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 3)
           (ATP-energized glutathione S-conjugate pump 3)
          Length = 1514

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 315 LNAVVLGNVGSGKSAVLNSLIG 380
           +   V G VGSGKS++L+SL+G
Sbjct: 669 MKVAVCGTVGSGKSSLLSSLLG 690



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>GIMA7_HUMAN (Q8NHV1) GTPase, IMAP family member 7 (Immunity-associated|
           nucleotide 7 protein)
          Length = 300

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 315 LNAVVLGNVGSGKSAVLNSLIG 380
           L  V++G  GSGKSA  N+++G
Sbjct: 9   LRIVLVGKTGSGKSATANTILG 30



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>MGM1_YEAST (P32266) Protein MGM1, mitochondrial precursor [Contains: Protein|
           MGM1 isoform 1; Protein MGM1 isoform 2]
          Length = 881

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 309 TFLNAVVLGNVGSGKSAVLNSLIG 380
           T  + VV+G+  SGKS+VL S++G
Sbjct: 209 TLPSIVVIGSQSSGKSSVLESIVG 232



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>MRP10_ARATH (Q9LZJ5) Multidrug resistance-associated protein 10 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 10)
           (ATP-energized glutathione S-conjugate pump 10)
          Length = 1539

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = +3

Query: 321 AVVLGNVGSGKSAVLNSLIG 380
           A ++G VGSGKS++L S++G
Sbjct: 670 AAIVGTVGSGKSSLLASVLG 689



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>SPN1_SCHPO (O36023) Septin homolog spn1|
          Length = 469

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +3

Query: 318 NAVVLGNVGSGKSAVLNSLI 377
           N +VLG  GSGKS ++N+L+
Sbjct: 97  NVLVLGESGSGKSTLVNTLL 116



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>MRP9_ARATH (Q9M1C7) Multidrug resistance-associated protein 9 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 9)
           (ATP-energized glutathione S-conjugate pump 9)
          Length = 1490

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 315 LNAVVLGNVGSGKSAVLNSLIG 380
           +   V G VGSGKS++L+S++G
Sbjct: 659 MKVAVCGAVGSGKSSLLSSILG 680


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,227,202
Number of Sequences: 219361
Number of extensions: 110392
Number of successful extensions: 917
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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