ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl27d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185399.2| Oryza sativa (japonica cultivar-group), mRNA 178 7e-42
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 178 7e-42
3dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic ... 178 7e-42
4dbj|AK103359.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 7e-42
5gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 46 0.070
6gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 46 0.070
7emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 46 0.070
8gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 46 0.070
9gb|AC116600.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.27
10gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 44 0.27
11gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, c... 44 0.27
12gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.27
13dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
14dbj|AK058793.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.27
15gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.27
16gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 42 1.1
17ref|XM_474169.1| Oryza sativa (japonica cultivar-group), predic... 42 1.1
18ref|NM_191548.1| Oryza sativa (japonica cultivar-group), predic... 42 1.1
19ref|XM_366075.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.1
20ref|XM_814756.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.1
21gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 42 1.1
22emb|AL606446.1|OSJN00016 Oryza sativa genomic DNA, chromosome 4,... 42 1.1
23dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
24dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
25dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
26dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
27dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.1
28emb|AJ544618.1|TRU544618 Takifugu rubripes utrn gene for putativ... 42 1.1
29gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.1
30emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4,... 42 1.1
31dbj|AB016843.1| Streptomyces thermoviolaceus chi25 gene, complet... 42 1.1
32ref|NM_197105.1| Oryza sativa (japonica cultivar-group) hypothet... 40 4.3
33gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 4.3
34gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
35gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.3
36gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 4.3
37gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 4.3
38gb|AC137075.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 4.3
39ref|XM_533631.2| PREDICTED: Canis familiaris similar to Glioma t... 40 4.3
40ref|XM_969712.1| PREDICTED: Tribolium castaneum similar to Potas... 40 4.3
41emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 40 4.3
42gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, comple... 40 4.3
43dbj|AB232384.1| Oryza sativa (japonica cultivar-group) OsFAD7-1 ... 40 4.3
44dbj|AB232382.1| Oryza sativa (japonica cultivar-group) OsFAD7-1 ... 40 4.3
45gb|AC090120.8| Oryza sativa chromosome 10 BAC OSJNBb0049A16 geno... 40 4.3
46gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
47dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
48dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
49dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
50dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
51gb|AY072040.1| Expression vector pANT1202, complete sequence 40 4.3
52gb|AY072039.1| Expression vector pANT1201, complete sequence 40 4.3
53gb|AY072038.1| Expression vector pANT1200, complete sequence 40 4.3
54gb|AY072037.1| Expression vector pANT849, complete sequence 40 4.3
55gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.3
56ref|XM_216225.3| PREDICTED: Rattus norvegicus protein phosphatas... 40 4.3
57dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
58dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
59emb|AJ414669.1|PI414669 Cloning vector pIJ6021 40 4.3
60dbj|AP004751.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
61dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
62dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, com... 40 4.3
63gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 4.3
64gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
65gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
66emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007... 40 4.3
67gb|DQ309424.1| Expression vector JN100, complete sequence 40 4.3
68gb|M21778.1|PIJ101CG Plasmid pIJ101 (from S.lividans), complete ... 40 4.3
69emb|AL808121.7| Zebrafish DNA sequence from clone CH211-251B22, ... 40 4.3 
>ref|NM_185399.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2643

 Score =  178 bits (90), Expect = 7e-42
 Identities = 202/237 (85%), Gaps = 3/237 (1%)
 Strand = Plus / Plus

                                                                       
Query: 89  cgaccaccacgcaagactgaggtccgcggccgcgcgctccgacctgccgggagcgctcgc 148
           ||||||||||||  | || ||| | |||||||||||||||||||||||||  ||||| ||
Sbjct: 134 cgaccaccacgcccgcctcagggcggcggccgcgcgctccgacctgccggccgcgctggc 193

                                                                       
Query: 149 agccttcgccgccatgtccacctccgcgtcggccagcccggtcctccgcaccttcacttc 208
            ||||||| |||||||||| || ||| | || ||| ||  ||||||||||||||||| ||
Sbjct: 194 cgccttcgtcgccatgtcctccgccggggcg-ccaccc--gtcctccgcaccttcacctc 250

                                                                       
Query: 209 cctcctcaagctctgtgcggcgcgcgccgacctcgcgaccggccgcgccgtccacgcgca 268
           ||||||||||||||| || || |||| ||||||||| |||||||||||||||||||||||
Sbjct: 251 cctcctcaagctctgcgccgcccgcggcgacctcgccaccggccgcgccgtccacgcgca 310

                                                                    
Query: 269 gctcgccgcacgcgggctctccgcggagtccctcgccgccacggcgctggccaacat 325
           ||||||||| || ||| |   | | ||| ||||||||||||| ||||||||||||||
Sbjct: 311 gctcgccgcccgggggatagactccgaggccctcgccgccaccgcgctggccaacat 367
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score =  178 bits (90), Expect = 7e-42
 Identities = 202/237 (85%), Gaps = 3/237 (1%)
 Strand = Plus / Plus

                                                                          
Query: 89     cgaccaccacgcaagactgaggtccgcggccgcgcgctccgacctgccgggagcgctcgc 148
              ||||||||||||  | || ||| | |||||||||||||||||||||||||  ||||| ||
Sbjct: 675259 cgaccaccacgcccgcctcagggcggcggccgcgcgctccgacctgccggccgcgctggc 675318

                                                                          
Query: 149    agccttcgccgccatgtccacctccgcgtcggccagcccggtcctccgcaccttcacttc 208
               ||||||| |||||||||| || ||| | || ||| ||  ||||||||||||||||| ||
Sbjct: 675319 cgccttcgtcgccatgtcctccgccggggcg-ccaccc--gtcctccgcaccttcacctc 675375

                                                                          
Query: 209    cctcctcaagctctgtgcggcgcgcgccgacctcgcgaccggccgcgccgtccacgcgca 268
              ||||||||||||||| || || |||| ||||||||| |||||||||||||||||||||||
Sbjct: 675376 cctcctcaagctctgcgccgcccgcggcgacctcgccaccggccgcgccgtccacgcgca 675435

                                                                       
Query: 269    gctcgccgcacgcgggctctccgcggagtccctcgccgccacggcgctggccaacat 325
              ||||||||| || ||| |   | | ||| ||||||||||||| ||||||||||||||
Sbjct: 675436 gctcgccgcccgggggatagactccgaggccctcgccgccaccgcgctggccaacat 675492



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 49       cctcgtcgccgccgcctccc 68
                ||||||||||||||||||||
Sbjct: 20406657 cctcgtcgccgccgcctccc 20406638



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 49       cctcgtcgccgccgcctccc 68
                ||||||||||||||||||||
Sbjct: 20406443 cctcgtcgccgccgcctccc 20406424



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 49      cctcgtcgccgccgcctccc 68
               ||||||||||||||||||||
Sbjct: 5201128 cctcgtcgccgccgcctccc 5201147
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>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC
             clone:P0029D06
          Length = 150120

 Score =  178 bits (90), Expect = 7e-42
 Identities = 202/237 (85%), Gaps = 3/237 (1%)
 Strand = Plus / Plus

                                                                         
Query: 89    cgaccaccacgcaagactgaggtccgcggccgcgcgctccgacctgccgggagcgctcgc 148
             ||||||||||||  | || ||| | |||||||||||||||||||||||||  ||||| ||
Sbjct: 81687 cgaccaccacgcccgcctcagggcggcggccgcgcgctccgacctgccggccgcgctggc 81746

                                                                         
Query: 149   agccttcgccgccatgtccacctccgcgtcggccagcccggtcctccgcaccttcacttc 208
              ||||||| |||||||||| || ||| | || ||| ||  ||||||||||||||||| ||
Sbjct: 81747 cgccttcgtcgccatgtcctccgccggggcg-ccaccc--gtcctccgcaccttcacctc 81803

                                                                         
Query: 209   cctcctcaagctctgtgcggcgcgcgccgacctcgcgaccggccgcgccgtccacgcgca 268
             ||||||||||||||| || || |||| ||||||||| |||||||||||||||||||||||
Sbjct: 81804 cctcctcaagctctgcgccgcccgcggcgacctcgccaccggccgcgccgtccacgcgca 81863

                                                                      
Query: 269   gctcgccgcacgcgggctctccgcggagtccctcgccgccacggcgctggccaacat 325
             ||||||||| || ||| |   | | ||| ||||||||||||| ||||||||||||||
Sbjct: 81864 gctcgccgcccgggggatagactccgaggccctcgccgccaccgcgctggccaacat 81920
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>dbj|AK103359.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126M02, full
           insert sequence
          Length = 2643

 Score =  178 bits (90), Expect = 7e-42
 Identities = 202/237 (85%), Gaps = 3/237 (1%)
 Strand = Plus / Plus

                                                                       
Query: 89  cgaccaccacgcaagactgaggtccgcggccgcgcgctccgacctgccgggagcgctcgc 148
           ||||||||||||  | || ||| | |||||||||||||||||||||||||  ||||| ||
Sbjct: 134 cgaccaccacgcccgcctcagggcggcggccgcgcgctccgacctgccggccgcgctggc 193

                                                                       
Query: 149 agccttcgccgccatgtccacctccgcgtcggccagcccggtcctccgcaccttcacttc 208
            ||||||| |||||||||| || ||| | || ||| ||  ||||||||||||||||| ||
Sbjct: 194 cgccttcgtcgccatgtcctccgccggggcg-ccaccc--gtcctccgcaccttcacctc 250

                                                                       
Query: 209 cctcctcaagctctgtgcggcgcgcgccgacctcgcgaccggccgcgccgtccacgcgca 268
           ||||||||||||||| || || |||| ||||||||| |||||||||||||||||||||||
Sbjct: 251 cctcctcaagctctgcgccgcccgcggcgacctcgccaccggccgcgccgtccacgcgca 310

                                                                    
Query: 269 gctcgccgcacgcgggctctccgcggagtccctcgccgccacggcgctggccaacat 325
           ||||||||| || ||| |   | | ||| ||||||||||||| ||||||||||||||
Sbjct: 311 gctcgccgcccgggggatagactccgaggccctcgccgccaccgcgctggccaacat 367
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 254    cgccgtccacgcgcagctcgccg 276
              |||||||||||||||||||||||
Sbjct: 258481 cgccgtccacgcgcagctcgccg 258503
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 254    cgccgtccacgcgcagctcgccg 276
              |||||||||||||||||||||||
Sbjct: 940750 cgccgtccacgcgcagctcgccg 940772
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 254    cgccgtccacgcgcagctcgccg 276
              |||||||||||||||||||||||
Sbjct: 783153 cgccgtccacgcgcagctcgccg 783175
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 254    cgccgtccacgcgcagctcgccg 276
              |||||||||||||||||||||||
Sbjct: 682656 cgccgtccacgcgcagctcgccg 682678
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>gb|AC116600.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAa0036D19, complete sequence
          Length = 126686

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 55    cgccgccgcctcccgccggcgg 76
             ||||||||||||||||||||||
Sbjct: 52842 cgccgccgcctcccgccggcgg 52863
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 66      cccgccggcgggcatgccgccaccga 91
               ||||||||||| ||||||||||||||
Sbjct: 1265070 cccgccggcggtcatgccgccaccga 1265045
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>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence
          Length = 144359

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 55     cgccgccgcctcccgccggcgg 76
              ||||||||||||||||||||||
Sbjct: 137201 cgccgccgcctcccgccggcgg 137222
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 164     gtccacctccgcgtcggccagc 185
               ||||||||||||||||||||||
Sbjct: 2482224 gtccacctccgcgtcggccagc 2482203
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 55      cgccgccgcctcccgccggcgg 76
               ||||||||||||||||||||||
Sbjct: 3704360 cgccgccgcctcccgccggcgg 3704381



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 141      gcgctcgcagccttcgccgccatg 164
                |||||||| |||||||||||||||
Sbjct: 18025693 gcgctcgccgccttcgccgccatg 18025716
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>dbj|AK058793.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-G03, full
           insert sequence
          Length = 688

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 41  gtgctcggcctcgtcgccgccg 62
           ||||||||||||||||||||||
Sbjct: 246 gtgctcggcctcgtcgccgccg 267
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 55      cgccgccgcctcccgccggcgg 76
               ||||||||||||||||||||||
Sbjct: 3704281 cgccgccgcctcccgccggcgg 3704302



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 141      gcgctcgcagccttcgccgccatg 164
                |||||||| |||||||||||||||
Sbjct: 18034946 gcgctcgccgccttcgccgccatg 18034969
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>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 263    cgcgcagctcgccgcacgcgg 283
              |||||||||||||||||||||
Sbjct: 406164 cgcgcagctcgccgcacgcgg 406144
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>ref|XM_474169.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 456

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 55  cgccgccgcctcccgccggcg 75
           |||||||||||||||||||||
Sbjct: 209 cgccgccgcctcccgccggcg 229
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>ref|NM_191548.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2571

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 51   tcgtcgccgccgcctcccgcc 71
            |||||||||||||||||||||
Sbjct: 1426 tcgtcgccgccgcctcccgcc 1446
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>ref|XM_366075.1| Magnaporthe grisea 70-15 hypothetical protein (MG10295.4) partial
          mRNA
          Length = 1494

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 54 tcgccgccgcctcccgccggc 74
          |||||||||||||||||||||
Sbjct: 40 tcgccgccgcctcccgccggc 60
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>ref|XM_814756.1| Trypanosoma cruzi strain CL Brener hypothetical protein
          (Tc00.1047053507711.30) partial mRNA
          Length = 1758

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 55 cgccgccgcctcccgccggcg 75
          |||||||||||||||||||||
Sbjct: 74 cgccgccgcctcccgccggcg 94
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 54      tcgccgccgcctcccgccggc 74
               |||||||||||||||||||||
Sbjct: 1524354 tcgccgccgcctcccgccggc 1524334
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>emb|AL606446.1|OSJN00016 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F16,
             complete sequence
          Length = 119535

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 55    cgccgccgcctcccgccggcg 75
             |||||||||||||||||||||
Sbjct: 95665 cgccgccgcctcccgccggcg 95645
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 55       cgccgccgcctcccgccggcg 75
                |||||||||||||||||||||
Sbjct: 33449786 cgccgccgcctcccgccggcg 33449766
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 51       tcgtcgccgccgcctcccgcc 71
                |||||||||||||||||||||
Sbjct: 30568767 tcgtcgccgccgcctcccgcc 30568787
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>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0036G09
          Length = 124118

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 51    tcgtcgccgccgcctcccgcc 71
             |||||||||||||||||||||
Sbjct: 51371 tcgtcgccgccgcctcccgcc 51391
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>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1060H01
          Length = 157987

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 51    tcgtcgccgccgcctcccgcc 71
             |||||||||||||||||||||
Sbjct: 11044 tcgtcgccgccgcctcccgcc 11064
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 223     gtgcggcgcgcgccgacctcg 243
               |||||||||||||||||||||
Sbjct: 4124274 gtgcggcgcgcgccgacctcg 4124254
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>emb|AJ544618.1|TRU544618 Takifugu rubripes utrn gene for putative utrophin, exons 1-54 and
            joined CDS
          Length = 46600

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 201  ttcacttccctcctcaagctc 221
            |||||||||||||||||||||
Sbjct: 4972 ttcacttccctcctcaagctc 4992
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 76      ggcatgccgccaccgaccacc 96
               |||||||||||||||||||||
Sbjct: 4626246 ggcatgccgccaccgaccacc 4626226
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>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13,
             complete sequence
          Length = 152264

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 55    cgccgccgcctcccgccggcg 75
             |||||||||||||||||||||
Sbjct: 25975 cgccgccgcctcccgccggcg 25955
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>dbj|AB016843.1| Streptomyces thermoviolaceus chi25 gene, complete cds
          Length = 1100

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 154 tcgccgccatgtccacctccgcgtcggcc 182
           |||||||||||| |||| |||||||||||
Sbjct: 248 tcgccgccatgttcaccgccgcgtcggcc 276
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>ref|NM_197105.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0049A16.11), mRNA
          Length = 2097

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 141 gcgctcgcagccttcgccgccatg 164
           |||||||| |||||||||||||||
Sbjct: 316 gcgctcgccgccttcgccgccatg 339
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 233     cgccgacctcgcgaccggcc 252
               ||||||||||||||||||||
Sbjct: 1523960 cgccgacctcgcgaccggcc 1523941
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>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0063D09 map S1559, complete sequence
          Length = 190721

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    gccgccgcctcccgccggcg 75
             ||||||||||||||||||||
Sbjct: 61060 gccgccgcctcccgccggcg 61079
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 41       gtgctcggcctcgtcgccgccgcc 64
                ||||||||||||| ||||||||||
Sbjct: 10054900 gtgctcggcctcgccgccgccgcc 10054877
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 43      gctcggcctcgtcgccgccg 62
               ||||||||||||||||||||
Sbjct: 1394685 gctcggcctcgtcgccgccg 1394704
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 79      atgccgccaccgaccaccac 98
               ||||||||||||||||||||
Sbjct: 1726058 atgccgccaccgaccaccac 1726039
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>gb|AC137075.2| Genomic sequence for Oryza sativa, Nipponbare striain, clone
              OSJNBb0027B12, from chromosome 3, complete sequence
          Length = 127426

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 41     gtgctcggcctcgtcgccgccgcc 64
              ||||||||||||| ||||||||||
Sbjct: 104816 gtgctcggcctcgccgccgccgcc 104793
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>ref|XM_533631.2| PREDICTED: Canis familiaris similar to Glioma tumor suppressor
           candidate region gene 2 protein (p60) (LOC476424), mRNA
          Length = 2243

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 47  ggcctcgtcgccgccgcctc 66
           ||||||||||||||||||||
Sbjct: 226 ggcctcgtcgccgccgcctc 207
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>ref|XM_969712.1| PREDICTED: Tribolium castaneum similar to Potassium voltage-gated
           channel subfamily KQT member 1 (Voltage-gated potassium
           channel subunit Kv7.1) (IKs producing slow voltage-gated
           potassium channel alpha subunit KvLQT1) (KQT-like 1)
           (LOC663676), mRNA
          Length = 2043

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 gcagctcgccgcacgcgggc 285
           ||||||||||||||||||||
Sbjct: 65  gcagctcgccgcacgcgggc 84
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>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 164    gtccacctccgcgtcggccagccc 187
              ||||||| ||||||||||||||||
Sbjct: 112776 gtccacccccgcgtcggccagccc 112753
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>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome
          Length = 156789

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    tccgcggccgcgcgctccga 130
              ||||||||||||||||||||
Sbjct: 113365 tccgcggccgcgcgctccga 113346
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>dbj|AB232384.1| Oryza sativa (japonica cultivar-group) OsFAD7-1 gene for plastid
            omega-3 fatty acid desaturase, complete cds
          Length = 5636

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 41   gtgctcggcctcgtcgccgccgcc 64
            ||||||||||||| ||||||||||
Sbjct: 2420 gtgctcggcctcgccgccgccgcc 2443
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>dbj|AB232382.1| Oryza sativa (japonica cultivar-group) OsFAD7-1 mRNA for plastid
           omega-3 fatty acid desaturase, complete cds
          Length = 1755

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 41  gtgctcggcctcgtcgccgccgcc 64
           ||||||||||||| ||||||||||
Sbjct: 540 gtgctcggcctcgccgccgccgcc 563
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>gb|AC090120.8| Oryza sativa chromosome 10 BAC OSJNBb0049A16 genomic sequence, complete
             sequence
          Length = 129585

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 141   gcgctcgcagccttcgccgccatg 164
             |||||||| |||||||||||||||
Sbjct: 35340 gcgctcgccgccttcgccgccatg 35317
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>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
           OSJNBb0078C05, complete sequence
          Length = 122116

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 41  gtgctcggcctcgtcgccgccgcc 64
           ||||||||||||| ||||||||||
Sbjct: 521 gtgctcggcctcgccgccgccgcc 498
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 53      gtcgccgccgcctcccgccggcgg 76
               ||||||||||| ||||||||||||
Sbjct: 3543204 gtcgccgccgcgtcccgccggcgg 3543227
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 56      gccgccgcctcccgccggcg 75
               ||||||||||||||||||||
Sbjct: 3693388 gccgccgcctcccgccggcg 3693407
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 54      tcgccgccgcctcccgccgg 73
               ||||||||||||||||||||
Sbjct: 7710188 tcgccgccgcctcccgccgg 7710169
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 41       gtgctcggcctcgtcgccgccgcc 64
                ||||||||||||| ||||||||||
Sbjct: 10053021 gtgctcggcctcgccgccgccgcc 10052998
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>gb|AY072040.1| Expression vector pANT1202, complete sequence
          Length = 6342

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 46   cggcctcgtcgccgccgcctcccgccgg 73
            |||||| |||||||||||| ||||||||
Sbjct: 2470 cggcctggtcgccgccgccgcccgccgg 2443
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>gb|AY072039.1| Expression vector pANT1201, complete sequence
          Length = 6607

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 46   cggcctcgtcgccgccgcctcccgccgg 73
            |||||| |||||||||||| ||||||||
Sbjct: 2435 cggcctggtcgccgccgccgcccgccgg 2408
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>gb|AY072038.1| Expression vector pANT1200, complete sequence
          Length = 8058

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 46   cggcctcgtcgccgccgcctcccgccgg 73
            |||||| |||||||||||| ||||||||
Sbjct: 4969 cggcctggtcgccgccgccgcccgccgg 4942
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>gb|AY072037.1| Expression vector pANT849, complete sequence
          Length = 5349

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 46   cggcctcgtcgccgccgcctcccgccgg 73
            |||||| |||||||||||| ||||||||
Sbjct: 2430 cggcctggtcgccgccgccgcccgccgg 2403
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 154     tcgccgccatgtccacctccgcgtcggc 181
               ||||||||||||||| ||| ||||||||
Sbjct: 2830042 tcgccgccatgtccatctcggcgtcggc 2830069



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 254     cgccgtccacgcgcagctcgccgc 277
               |||||||| |||||||||||||||
Sbjct: 1879109 cgccgtccgcgcgcagctcgccgc 1879086



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 225   gcggcgcgcgccgacctcgcgacc 248
             |||||||||||||| |||||||||
Sbjct: 36222 gcggcgcgcgccgagctcgcgacc 36199
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>ref|XM_216225.3| PREDICTED: Rattus norvegicus protein phosphatase 4, regulatory
           subunit 2 (predicted) (Ppp4r2_predicted), mRNA
          Length = 4878

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 289 ccgcggagtccctcgccgcc 308
           ||||||||||||||||||||
Sbjct: 248 ccgcggagtccctcgccgcc 229
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>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0016D02
          Length = 157822

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     cctcgtcgccgccgcctccc 68
              ||||||||||||||||||||
Sbjct: 130052 cctcgtcgccgccgcctccc 130033



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     cctcgtcgccgccgcctccc 68
              ||||||||||||||||||||
Sbjct: 129838 cctcgtcgccgccgcctccc 129819
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>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0016O19
          Length = 169120

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    cctcgtcgccgccgcctccc 68
             ||||||||||||||||||||
Sbjct: 67850 cctcgtcgccgccgcctccc 67869
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>emb|AJ414669.1|PI414669 Cloning vector pIJ6021
          Length = 8215

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 46   cggcctcgtcgccgccgcctcccgccgg 73
            |||||| |||||||||||| ||||||||
Sbjct: 8054 cggcctggtcgccgccgccgcccgccgg 8027
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>dbj|AP004751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0494D11
          Length = 149198

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     tcgccgccgcctcccgccgg 73
              ||||||||||||||||||||
Sbjct: 135383 tcgccgccgcctcccgccgg 135364
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>dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1221_H04
          Length = 129387

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    tcgccgccgcctcccgccgg 73
             ||||||||||||||||||||
Sbjct: 50911 tcgccgccgcctcccgccgg 50892
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>dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, complete sequence
          Length = 106873

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    tccgcggccgcgcgctccga 130
              ||||||||||||||||||||
Sbjct: 104250 tccgcggccgcgcgctccga 104231
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 40      tgtgctcggcctcgtcgccg 59
               ||||||||||||||||||||
Sbjct: 1798205 tgtgctcggcctcgtcgccg 1798186
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 56      gccgccgcctcccgccggcg 75
               ||||||||||||||||||||
Sbjct: 3702082 gccgccgcctcccgccggcg 3702101
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 53      gtcgccgccgcctcccgccggcgg 76
               ||||||||||| ||||||||||||
Sbjct: 3543149 gtcgccgccgcgtcccgccggcgg 3543172
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>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103647

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    gtcgccgccgcctcccgccggcgg 76
             ||||||||||| ||||||||||||
Sbjct: 58132 gtcgccgccgcgtcccgccggcgg 58155
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>gb|DQ309424.1| Expression vector JN100, complete sequence
          Length = 6460

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 46   cggcctcgtcgccgccgcctcccgccgg 73
            |||||| |||||||||||| ||||||||
Sbjct: 2470 cggcctggtcgccgccgccgcccgccgg 2443
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>gb|M21778.1|PIJ101CG Plasmid pIJ101 (from S.lividans), complete genome
          Length = 8830

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 46   cggcctcgtcgccgccgcctcccgccgg 73
            |||||| |||||||||||| ||||||||
Sbjct: 2027 cggcctggtcgccgccgccgcccgccgg 2000
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>emb|AL808121.7| Zebrafish DNA sequence from clone CH211-251B22, complete sequence
          Length = 154450

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     atacaagaggacatgctgtg 43
              ||||||||||||||||||||
Sbjct: 148136 atacaagaggacatgctgtg 148155


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,512,937
Number of Sequences: 3902068
Number of extensions: 2512937
Number of successful extensions: 73598
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68826
Number of HSP's gapped (non-prelim): 4772
length of query: 325
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 303
effective length of database: 17,147,199,772
effective search space: 5195601530916
effective search space used: 5195601530916
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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