ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl27d04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463398.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2478 Score = 190 bits (96), Expect = 3e-45 Identities = 219/260 (84%) Strand = Plus / Plus Query: 183 agccgatgagctccggtcgcacgcagcggcgctgcagggctgcgccgtccgccgagcgct 242 |||||| ||||||||||| |||| ||||| || ||||||||||||| | |||| ||||| Sbjct: 168 agccgaggagctccggtcctacgccgcggcactccagggctgcgccgccagccgcgcgct 227 Query: 243 ccgctgcggacaggagctccacgcgcggctgctccgctccgcgcggcagccggacacgtt 302 |||| |||| ||| ||||||||||| |||||||| |||| || || |||||| |||| Sbjct: 228 ccgccgcgggaaggccctccacgcgcgcctgctccggtccgggccgcgcccggacgcgtt 287 Query: 303 tctcctcgactcgctcctcaacatgtactgcaagtgcggccgcctggaggacgcacgaag 362 || | ||||||||| ||||||||||||||||||||||||||||| | ||||||||| || Sbjct: 288 cctgcacgactcgctgctcaacatgtactgcaagtgcggccgcctcgcggacgcacgcag 347 Query: 363 ggtgttcgacggaatgccacacagggacgtcgtcgcctggaccgccctcttatccgccca 422 ||||||||||| ||||| ||| ||||||||||||||||||| ||| | | ||||| Sbjct: 348 cgtgttcgacgggatgccgcaccgggacgtcgtcgcctggacggccatggtctccgctat 407 Query: 423 caccgccgcgggagatgccg 442 |||||| ||||||||||||| Sbjct: 408 caccgcggcgggagatgccg 427
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 190 bits (96), Expect = 3e-45 Identities = 219/260 (84%) Strand = Plus / Plus Query: 183 agccgatgagctccggtcgcacgcagcggcgctgcagggctgcgccgtccgccgagcgct 242 |||||| ||||||||||| |||| ||||| || ||||||||||||| | |||| ||||| Sbjct: 23577495 agccgaggagctccggtcctacgccgcggcactccagggctgcgccgccagccgcgcgct 23577554 Query: 243 ccgctgcggacaggagctccacgcgcggctgctccgctccgcgcggcagccggacacgtt 302 |||| |||| ||| ||||||||||| |||||||| |||| || || |||||| |||| Sbjct: 23577555 ccgccgcgggaaggccctccacgcgcgcctgctccggtccgggccgcgcccggacgcgtt 23577614 Query: 303 tctcctcgactcgctcctcaacatgtactgcaagtgcggccgcctggaggacgcacgaag 362 || | ||||||||| ||||||||||||||||||||||||||||| | ||||||||| || Sbjct: 23577615 cctgcacgactcgctgctcaacatgtactgcaagtgcggccgcctcgcggacgcacgcag 23577674 Query: 363 ggtgttcgacggaatgccacacagggacgtcgtcgcctggaccgccctcttatccgccca 422 ||||||||||| ||||| ||| ||||||||||||||||||| ||| | | ||||| Sbjct: 23577675 cgtgttcgacgggatgccgcaccgggacgtcgtcgcctggacggccatggtctccgctat 23577734 Query: 423 caccgccgcgggagatgccg 442 |||||| ||||||||||||| Sbjct: 23577735 caccgcggcgggagatgccg 23577754 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 326 tgtactgcaagtgcggccgcctggaggacgcacgaagggtgttcgacggaatgc 379 |||||||||||||||||| ||||| ||||| || ||||||||||||||||||| Sbjct: 38221302 tgtactgcaagtgcggcctcctggccgacgcgcgcagggtgttcgacggaatgc 38221249 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 343 cgcctggaggacgcacgaagggtgttcgacggaatgcc 380 |||||||| | ||| || |||||||||||||||||||| Sbjct: 23004710 cgcctggacgccgcgcgcagggtgttcgacggaatgcc 23004673 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 363 ggtgttcgacggaatgccacacagggacgtcgtcgcctggaccgccctc 411 ||||||||||| |||||| | | ||||||| ||| |||||||| ||||| Sbjct: 38429076 ggtgttcgacgaaatgccgcgccgggacgtggtcacctggacctccctc 38429124
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 190 bits (96), Expect = 3e-45 Identities = 219/260 (84%) Strand = Plus / Plus Query: 183 agccgatgagctccggtcgcacgcagcggcgctgcagggctgcgccgtccgccgagcgct 242 |||||| ||||||||||| |||| ||||| || ||||||||||||| | |||| ||||| Sbjct: 40194 agccgaggagctccggtcctacgccgcggcactccagggctgcgccgccagccgcgcgct 40253 Query: 243 ccgctgcggacaggagctccacgcgcggctgctccgctccgcgcggcagccggacacgtt 302 |||| |||| ||| ||||||||||| |||||||| |||| || || |||||| |||| Sbjct: 40254 ccgccgcgggaaggccctccacgcgcgcctgctccggtccgggccgcgcccggacgcgtt 40313 Query: 303 tctcctcgactcgctcctcaacatgtactgcaagtgcggccgcctggaggacgcacgaag 362 || | ||||||||| ||||||||||||||||||||||||||||| | ||||||||| || Sbjct: 40314 cctgcacgactcgctgctcaacatgtactgcaagtgcggccgcctcgcggacgcacgcag 40373 Query: 363 ggtgttcgacggaatgccacacagggacgtcgtcgcctggaccgccctcttatccgccca 422 ||||||||||| ||||| ||| ||||||||||||||||||| ||| | | ||||| Sbjct: 40374 cgtgttcgacgggatgccgcaccgggacgtcgtcgcctggacggccatggtctccgctat 40433 Query: 423 caccgccgcgggagatgccg 442 |||||| ||||||||||||| Sbjct: 40434 caccgcggcgggagatgccg 40453
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 190 bits (96), Expect = 3e-45 Identities = 219/260 (84%) Strand = Plus / Plus Query: 183 agccgatgagctccggtcgcacgcagcggcgctgcagggctgcgccgtccgccgagcgct 242 |||||| ||||||||||| |||| ||||| || ||||||||||||| | |||| ||||| Sbjct: 140800 agccgaggagctccggtcctacgccgcggcactccagggctgcgccgccagccgcgcgct 140859 Query: 243 ccgctgcggacaggagctccacgcgcggctgctccgctccgcgcggcagccggacacgtt 302 |||| |||| ||| ||||||||||| |||||||| |||| || || |||||| |||| Sbjct: 140860 ccgccgcgggaaggccctccacgcgcgcctgctccggtccgggccgcgcccggacgcgtt 140919 Query: 303 tctcctcgactcgctcctcaacatgtactgcaagtgcggccgcctggaggacgcacgaag 362 || | ||||||||| ||||||||||||||||||||||||||||| | ||||||||| || Sbjct: 140920 cctgcacgactcgctgctcaacatgtactgcaagtgcggccgcctcgcggacgcacgcag 140979 Query: 363 ggtgttcgacggaatgccacacagggacgtcgtcgcctggaccgccctcttatccgccca 422 ||||||||||| ||||| ||| ||||||||||||||||||| ||| | | ||||| Sbjct: 140980 cgtgttcgacgggatgccgcaccgggacgtcgtcgcctggacggccatggtctccgctat 141039 Query: 423 caccgccgcgggagatgccg 442 |||||| ||||||||||||| Sbjct: 141040 caccgcggcgggagatgccg 141059
>ref|NM_190164.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1647 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 326 tgtactgcaagtgcggccgcctggaggacgcacgaagggtgttcgacggaatgc 379 |||||||||||||||||| ||||| ||||| || ||||||||||||||||||| Sbjct: 296 tgtactgcaagtgcggcctcctggccgacgcgcgcagggtgttcgacggaatgc 349
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 326 tgtactgcaagtgcggccgcctggaggacgcacgaagggtgttcgacggaatgc 379 |||||||||||||||||| ||||| ||||| || ||||||||||||||||||| Sbjct: 140536 tgtactgcaagtgcggcctcctggccgacgcgcgcagggtgttcgacggaatgc 140483
>dbj|AK069671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027J18, full insert sequence Length = 2017 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 326 tgtactgcaagtgcggccgcctggaggacgcacgaagggtgttcgacggaatgc 379 |||||||||||||||||| ||||| ||||| || ||||||||||||||||||| Sbjct: 399 tgtactgcaagtgcggcctcctggccgacgcgcgcagggtgttcgacggaatgc 452
>emb|AL606601.3|OSJN00029 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055H05, complete sequence Length = 152329 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 347 tggaggacgcacgaagggtgttcgacggaatgccacacagggacgtcgtcgcctgg 402 ||||||||||||| ||||||||||| || ||||| || ||||| ||||||||||| Sbjct: 109273 tggaggacgcacgcagggtgttcgatgggatgcctgaccgggacctcgtcgcctgg 109218
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 347 tggaggacgcacgaagggtgttcgacggaatgccacacagggacgtcgtcgcctgg 402 ||||||||||||| ||||||||||| || ||||| || ||||| ||||||||||| Sbjct: 8047149 tggaggacgcacgcagggtgttcgatgggatgcctgaccgggacctcgtcgcctgg 8047094 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 cgccgcgggagatgccgagg 445 |||||||||||||||||||| Sbjct: 34481660 cgccgcgggagatgccgagg 34481679
>ref|NM_194125.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1905 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 323 acatgtactgcaagtgcggccgcctggaggacgc 356 |||||||||||||||| ||| ||||||||||||| Sbjct: 914 acatgtactgcaagtgtggcagcctggaggacgc 947
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 323 acatgtactgcaagtgcggccgcctggaggacgc 356 |||||||||||||||| ||| ||||||||||||| Sbjct: 742844 acatgtactgcaagtgtggcagcctggaggacgc 742877
>dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_G09 Length = 115815 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 323 acatgtactgcaagtgcggccgcctggaggacgc 356 |||||||||||||||| ||| ||||||||||||| Sbjct: 81375 acatgtactgcaagtgtggcagcctggaggacgc 81408
>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1513_F02 Length = 126845 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 323 acatgtactgcaagtgcggccgcctggaggacgc 356 |||||||||||||||| ||| ||||||||||||| Sbjct: 62651 acatgtactgcaagtgtggcagcctggaggacgc 62684
>ref|NM_185399.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2643 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Plus Query: 321 caacatgtactgcaagtgcggccgcctggaggacgcacgaagggtgttcgacggaatgcc 380 |||||||||| ||||||| |||||| | |||||||| |||||||||||| ||||||| Sbjct: 362 caacatgtacgccaagtgccgccgccccgccgacgcacgcagggtgttcgaccgaatgcc 421
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Plus Query: 321 caacatgtactgcaagtgcggccgcctggaggacgcacgaagggtgttcgacggaatgcc 380 |||||||||| ||||||| |||||| | |||||||| |||||||||||| ||||||| Sbjct: 675487 caacatgtacgccaagtgccgccgccccgccgacgcacgcagggtgttcgaccgaatgcc 675546 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 363 ggtgttcgacggaatgccacacagggacgtcgt 395 |||||||||||||||||| | ||||||||||| Sbjct: 2281731 ggtgttcgacggaatgccgcggagggacgtcgt 2281763
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC clone:P0029D06 Length = 150120 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Plus Query: 321 caacatgtactgcaagtgcggccgcctggaggacgcacgaagggtgttcgacggaatgcc 380 |||||||||| ||||||| |||||| | |||||||| |||||||||||| ||||||| Sbjct: 81915 caacatgtacgccaagtgccgccgccccgccgacgcacgcagggtgttcgaccgaatgcc 81974
>dbj|AK103359.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126M02, full insert sequence Length = 2643 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Plus Query: 321 caacatgtactgcaagtgcggccgcctggaggacgcacgaagggtgttcgacggaatgcc 380 |||||||||| ||||||| |||||| | |||||||| |||||||||||| ||||||| Sbjct: 362 caacatgtacgccaagtgccgccgccccgccgacgcacgcagggtgttcgaccgaatgcc 421
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 232 cgccgagcgctccgctgcggaca 254 ||||||||||||||||||||||| Sbjct: 1293002 cgccgagcgctccgctgcggaca 1292980
>ref|NM_196723.1| Oryza sativa (japonica cultivar-group) putative PPR-repeat containing protein (OSJNBb0015F09b.17), mRNA Length = 2094 Score = 44.1 bits (22), Expect = 0.40 Identities = 58/70 (82%) Strand = Plus / Plus Query: 311 actcgctcctcaacatgtactgcaagtgcggccgcctggaggacgcacgaagggtgttcg 370 |||||||| || || |||||||||||||||| | ||| ||||| ||| | ||||||| Sbjct: 308 actcgctcatccacctgtactgcaagtgcggtgccgtggccgacgcgcgacgtgtgttcg 367 Query: 371 acggaatgcc 380 |||||||||| Sbjct: 368 acggaatgcc 377
>ref|NM_192572.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3189 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 343 cgcctggaggacgcacgaagggtgttcgacggaatgcc 380 |||||||| | ||| || |||||||||||||||||||| Sbjct: 343 cgcctggacgccgcgcgcagggtgttcgacggaatgcc 380
>ref|XM_470297.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1533 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 351 ggacgcacgaagggtgttcgacggaatgcc 380 ||||||||| ||||||||||||| |||||| Sbjct: 534 ggacgcacgcagggtgttcgacgaaatgcc 563
>gb|AC156163.2| Mus musculus BAC clone RP24-122E11 from chromosome 9, complete sequence Length = 141660 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 ctcttctccttcccaccccaac 162 |||||||||||||||||||||| Sbjct: 1219 ctcttctccttcccaccccaac 1240
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 351 ggacgcacgaagggtgttcgacggaatgcc 380 ||||||||| ||||||||||||| |||||| Sbjct: 3706838 ggacgcacgcagggtgttcgacgaaatgcc 3706867 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 363 ggtgttcgacggaatgccacacagggacgtcgtcgcctgga 403 |||||||||||||||||| | |||| ||| |||| |||||| Sbjct: 21218722 ggtgttcgacggaatgccgcgcaggaacgccgtcacctgga 21218682 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 cgcgcggctgctccgctccgc 284 ||||||||||||||||||||| Sbjct: 11182558 cgcgcggctgctccgctccgc 11182538 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 360 aagggtgttcgacggaatgcc 380 ||||||||||||||||||||| Sbjct: 1998275 aagggtgttcgacggaatgcc 1998255 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 365 tgttcgacggaatgccacacagggacgtcgtc 396 |||||||||||||||| | |||||||| |||| Sbjct: 35045046 tgttcgacggaatgccgcgcagggacgccgtc 35045015 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 acatgtactgcaagtgcggc 342 |||||||||||||||||||| Sbjct: 24138904 acatgtactgcaagtgcggc 24138885
>gb|AC123520.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034O04, complete sequence Length = 164882 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 354 cgcacgaagggtgttcgacggaatgc 379 |||||| ||||||||||||||||||| Sbjct: 27605 cgcacgcagggtgttcgacggaatgc 27630
>gb|AC073391.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0015F09b, complete sequence Length = 108964 Score = 44.1 bits (22), Expect = 0.40 Identities = 58/70 (82%) Strand = Plus / Minus Query: 311 actcgctcctcaacatgtactgcaagtgcggccgcctggaggacgcacgaagggtgttcg 370 |||||||| || || |||||||||||||||| | ||| ||||| ||| | ||||||| Sbjct: 93378 actcgctcatccacctgtactgcaagtgcggtgccgtggccgacgcgcgacgtgtgttcg 93319 Query: 371 acggaatgcc 380 |||||||||| Sbjct: 93318 acggaatgcc 93309
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 351 ggacgcacgaagggtgttcgacggaatgcc 380 ||||||||| ||||||||||||| |||||| Sbjct: 74539 ggacgcacgcagggtgttcgacgaaatgcc 74510
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 363 ggtgttcgacggaatgccacacagggacgtcgtcgcctggac 404 ||||||||||| |||||| |||||| || ||||| ||||||| Sbjct: 530308 ggtgttcgacgaaatgccgcacaggaacctcgtctcctggac 530349 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 361 agggtgttcgacggaatgccacac 384 ||||||||||||| |||||||||| Sbjct: 500850 agggtgttcgacgaaatgccacac 500827
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 354 cgcacgaagggtgttcgacggaatgc 379 |||||| ||||||||||||||||||| Sbjct: 5817721 cgcacgcagggtgttcgacggaatgc 5817746 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 tgtactgcaagtgcggccgcctgg 349 |||||||||||||||||| ||||| Sbjct: 15092347 tgtactgcaagtgcggcctcctgg 15092370 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 361 agggtgttcgacggaatgccacac 384 ||||||||||||| |||||||||| Sbjct: 446550 agggtgttcgacgaaatgccacac 446527
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.40 Identities = 58/70 (82%) Strand = Plus / Minus Query: 311 actcgctcctcaacatgtactgcaagtgcggccgcctggaggacgcacgaagggtgttcg 370 |||||||| || || |||||||||||||||| | ||| ||||| ||| | ||||||| Sbjct: 15510032 actcgctcatccacctgtactgcaagtgcggtgccgtggccgacgcgcgacgtgtgttcg 15509973 Query: 371 acggaatgcc 380 |||||||||| Sbjct: 15509972 acggaatgcc 15509963
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 351 ggacgcacgaagggtgttcgacggaatgcc 380 ||||||||| ||||||||||||| |||||| Sbjct: 3706949 ggacgcacgcagggtgttcgacgaaatgcc 3706978 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 363 ggtgttcgacggaatgccacacagggacgtcgtcgcctgga 403 |||||||||||||||||| | |||| ||| |||| |||||| Sbjct: 21211751 ggtgttcgacggaatgccgcgcaggaacgccgtcacctgga 21211711 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 cgcgcggctgctccgctccgc 284 ||||||||||||||||||||| Sbjct: 11179321 cgcgcggctgctccgctccgc 11179301 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 360 aagggtgttcgacggaatgcc 380 ||||||||||||||||||||| Sbjct: 1998287 aagggtgttcgacggaatgcc 1998267 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 365 tgttcgacggaatgccacacagggacgtcgtc 396 |||||||||||||||| | |||||||| |||| Sbjct: 35135118 tgttcgacggaatgccgcgcagggacgccgtc 35135087 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 acatgtactgcaagtgcggc 342 |||||||||||||||||||| Sbjct: 24055838 acatgtactgcaagtgcggc 24055819
>dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415C01 Length = 138701 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 343 cgcctggaggacgcacgaagggtgttcgacggaatgcc 380 |||||||| | ||| || |||||||||||||||||||| Sbjct: 75116 cgcctggacgccgcgcgcagggtgttcgacggaatgcc 75079
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.40 Identities = 58/70 (82%) Strand = Plus / Minus Query: 311 actcgctcctcaacatgtactgcaagtgcggccgcctggaggacgcacgaagggtgttcg 370 |||||||| || || |||||||||||||||| | ||| ||||| ||| | ||||||| Sbjct: 15518273 actcgctcatccacctgtactgcaagtgcggtgccgtggccgacgcgcgacgtgtgttcg 15518214 Query: 371 acggaatgcc 380 |||||||||| Sbjct: 15518213 acggaatgcc 15518204
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 354 cgcacgaagggtgttcgacggaatgc 379 |||||| ||||||||||||||||||| Sbjct: 5884198 cgcacgcagggtgttcgacggaatgc 5884223 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 tgtactgcaagtgcggccgcctgg 349 |||||||||||||||||| ||||| Sbjct: 15174045 tgtactgcaagtgcggcctcctgg 15174068 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 361 agggtgttcgacggaatgccacac 384 ||||||||||||| |||||||||| Sbjct: 446550 agggtgttcgacgaaatgccacac 446527
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 363 ggtgttcgacggaatgccacacagggacgtcgtcgcctggac 404 ||||||||||| |||||| |||||| || ||||| ||||||| Sbjct: 530308 ggtgttcgacgaaatgccgcacaggaacctcgtctcctggac 530349 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 361 agggtgttcgacggaatgccacac 384 ||||||||||||| |||||||||| Sbjct: 500850 agggtgttcgacgaaatgccacac 500827
>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141089 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Minus Query: 363 ggtgttcgacggaatgccacacagggacgtcgtcgcctggac 404 ||||||||||| |||||| |||||| || ||||| ||||||| Sbjct: 16464 ggtgttcgacgaaatgccgcacaggaacctcgtctcctggac 16423 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 361 agggtgttcgacggaatgccacac 384 ||||||||||||| |||||||||| Sbjct: 45922 agggtgttcgacgaaatgccacac 45945
>emb|CT025660.9| Mouse DNA sequence from clone RP24-79I19 on chromosome 9, complete sequence Length = 219226 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 141 ctcttctccttcccaccccaac 162 |||||||||||||||||||||| Sbjct: 11117 ctcttctccttcccaccccaac 11096
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003A09, complete sequence Length = 167222 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 360 aagggtgttcgacggaatgcc 380 ||||||||||||||||||||| Sbjct: 37036 aagggtgttcgacggaatgcc 37016
>ref|XM_493751.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2292 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 363 ggtgttcgacggaatgccacacagggacgtcgt 395 |||||||||||||||||| | ||||||||||| Sbjct: 168 ggtgttcgacggaatgccgcggagggacgtcgt 200
>ref|XM_463052.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1965 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 363 ggtgttcgacggaatgccacacagggacgtcgtcgcctgga 403 |||||||||||||||||| | |||| ||| |||| |||||| Sbjct: 390 ggtgttcgacggaatgccgcgcaggaacgccgtcacctgga 430
>ref|XM_463547.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1554 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 363 ggtgttcgacggaatgccacacagggacgtcgtcgcctggaccgccctc 411 ||||||||||| |||||| | | ||||||| ||| |||||||| ||||| Sbjct: 297 ggtgttcgacgaaatgccgcgccgggacgtggtcacctggacctccctc 345
>ref|XM_906694.2| PREDICTED: Mus musculus RIKEN cDNA 1700020L13 gene (1700020L13Rik), mRNA Length = 1184 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 cggcggacgcgactcgcggcg 138 ||||||||||||||||||||| Sbjct: 110 cggcggacgcgactcgcggcg 90
>ref|XM_906682.2| PREDICTED: Mus musculus similar to WD repeat domain 62 (LOC632530), mRNA Length = 363 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 cggcggacgcgactcgcggcg 138 ||||||||||||||||||||| Sbjct: 200 cggcggacgcgactcgcggcg 220
>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence Length = 174910 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 363 ggtgttcgacggaatgccacacagggacgtcgtcgcctgga 403 |||||||||||||||||| | |||| ||| |||| |||||| Sbjct: 74637 ggtgttcgacggaatgccgcgcaggaacgccgtcacctgga 74597
>ref|XM_994034.1| PREDICTED: Mus musculus RIKEN cDNA 1700020L13 gene (1700020L13Rik), mRNA Length = 1184 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 cggcggacgcgactcgcggcg 138 ||||||||||||||||||||| Sbjct: 110 cggcggacgcgactcgcggcg 90
>ref|XM_001000450.1| PREDICTED: Mus musculus WD repeat domain 62, transcript variant 2 (Wdr62), mRNA Length = 4744 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 cggcggacgcgactcgcggcg 138 ||||||||||||||||||||| Sbjct: 219 cggcggacgcgactcgcggcg 239
>ref|XM_891376.2| PREDICTED: Mus musculus WD repeat domain 62, transcript variant 2 (Wdr62), mRNA Length = 4744 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 cggcggacgcgactcgcggcg 138 ||||||||||||||||||||| Sbjct: 219 cggcggacgcgactcgcggcg 239
>ref|XM_001000510.1| PREDICTED: Mus musculus RIKEN cDNA 1700020L13 gene (1700020L13Rik), mRNA Length = 1184 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 cggcggacgcgactcgcggcg 138 ||||||||||||||||||||| Sbjct: 110 cggcggacgcgactcgcggcg 90
>ref|XM_773873.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_480_54413_55411) partial mRNA Length = 999 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 ggacacgtttctcctcgactc 314 ||||||||||||||||||||| Sbjct: 685 ggacacgtttctcctcgactc 665
>ref|XM_773874.1| Giardia lamblia ATCC 50803 peptidase D (GLP_480_55777_54443) partial mRNA Length = 1335 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 ggacacgtttctcctcgactc 314 ||||||||||||||||||||| Sbjct: 681 ggacacgtttctcctcgactc 701
>gb|AC149067.3| Mus musculus BAC clone RP23-56C20 from chromosome 7, complete sequence Length = 267610 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 cggcggacgcgactcgcggcg 138 ||||||||||||||||||||| Sbjct: 88902 cggcggacgcgactcgcggcg 88882
>gb|BC054747.1| Mus musculus WD repeat domain 62, mRNA (cDNA clone MGC:65624 IMAGE:6405269), complete cds Length = 4801 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 cggcggacgcgactcgcggcg 138 ||||||||||||||||||||| Sbjct: 194 cggcggacgcgactcgcggcg 214
>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0011G21, from chromosome 3, complete sequence Length = 142401 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 cgcgcggctgctccgctccgc 284 ||||||||||||||||||||| Sbjct: 95915 cgcgcggctgctccgctccgc 95895
>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0085H08, from chromosome 3, complete sequence Length = 126708 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 cgcgcggctgctccgctccgc 284 ||||||||||||||||||||| Sbjct: 98171 cgcgcggctgctccgctccgc 98191
>dbj|AK154592.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630050M23 product:Similar to Jun N-terminal kinase binding protein 1, JNK-binding protein 1, Jun N-terminal kinase-binding protein 1, full insert sequence Length = 4712 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 cggcggacgcgactcgcggcg 138 ||||||||||||||||||||| Sbjct: 190 cggcggacgcgactcgcggcg 210
>dbj|AK006173.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700020L13 product:hypothetical protein, full insert sequence Length = 1186 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 cggcggacgcgactcgcggcg 138 ||||||||||||||||||||| Sbjct: 111 cggcggacgcgactcgcggcg 91
>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence Length = 193444 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 363 ggtgttcgacggaatgccacacagggacgtcgtcgcctggaccgccctc 411 ||||||||||| |||||| | | ||||||| ||| |||||||| ||||| Sbjct: 22175 ggtgttcgacgaaatgccgcgccgggacgtggtcacctggacctccctc 22223
>dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408G07 Length = 126631 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 363 ggtgttcgacggaatgccacacagggacgtcgtcgcctggaccgccctc 411 ||||||||||| |||||| | | ||||||| ||| |||||||| ||||| Sbjct: 14491 ggtgttcgacgaaatgccgcgccgggacgtggtcacctggacctccctc 14539
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20 Length = 147363 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 363 ggtgttcgacggaatgccacacagggacgtcgt 395 |||||||||||||||||| | ||||||||||| Sbjct: 3532 ggtgttcgacggaatgccgcggagggacgtcgt 3564
>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0535G04 Length = 154180 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 363 ggtgttcgacggaatgccacacagggacgtcgt 395 |||||||||||||||||| | ||||||||||| Sbjct: 141188 ggtgttcgacggaatgccgcggagggacgtcgt 141220
>dbj|AK063357.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C07, full insert sequence Length = 2181 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 363 ggtgttcgacggaatgccacacagggacgtcgtcgcctgga 403 |||||||||||||||||| | |||| ||| |||| |||||| Sbjct: 412 ggtgttcgacggaatgccgcgcaggaacgccgtcacctgga 452
>ref|XM_474328.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1677 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 cgccgcgggagatgccgagg 445 |||||||||||||||||||| Sbjct: 196 cgccgcgggagatgccgagg 177
>ref|XM_468977.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1431 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 acatgtactgcaagtgcggc 342 |||||||||||||||||||| Sbjct: 785 acatgtactgcaagtgcggc 804
>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0059G01, complete sequence Length = 141661 Score = 40.1 bits (20), Expect = 6.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 361 agggtgttcgacggaatgccacacagggacgtcgtcgcctggac 404 ||||||||||||| |||||| ||| |||| || ||| ||||||| Sbjct: 11015 agggtgttcgacgaaatgccccaccgggatgtggtctcctggac 11058
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 40.1 bits (20), Expect = 6.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 361 agggtgttcgacggaatgccacacagggacgtcgtcgcctggac 404 ||||||||||||| |||||| ||| |||| || ||| ||||||| Sbjct: 117787 agggtgttcgacgaaatgccccaccgggatgtggtctcctggac 117830
>gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genomic sequence, complete sequence Length = 130272 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 365 tgttcgacggaatgccacacagggacgtcgtc 396 |||||||||||||||| | |||||||| |||| Sbjct: 45947 tgttcgacggaatgccgcgcagggacgccgtc 45916
>gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0070D14, complete sequence Length = 174780 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 tgtactgcaagtgcggccgcctgg 349 |||||||||||||||||| ||||| Sbjct: 85311 tgtactgcaagtgcggcctcctgg 85334
>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete sequence Length = 140980 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 acatgtactgcaagtgcggc 342 |||||||||||||||||||| Sbjct: 84928 acatgtactgcaagtgcggc 84947
>ref|XM_504480.1| Yarrowia lipolytica CLIB122, YALI0E27742g predicted mRNA Length = 846 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 ctcctcgactcgctcctcaa 323 |||||||||||||||||||| Sbjct: 783 ctcctcgactcgctcctcaa 764
>emb|AL109627.18|HSJ733M16 Human DNA sequence from clone RP4-733M16 on chromosome 1p36.11-36.23 Contains four novel genes, a novel gene (FLJ33962), a novel gene (MGC10731), the 3' end of a novel gene (KIAA1332), a metallothionein family pseudogene and three CpG islands, complete sequence Length = 120825 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gactgccacctctccacggc 121 |||||||||||||||||||| Sbjct: 100781 gactgccacctctccacggc 100800
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 cgtccgccgagcgctccgctgcgg 251 |||| ||||||||||||||||||| Sbjct: 3126267 cgtcggccgagcgctccgctgcgg 3126290
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 cgccgcgggagatgccgagg 445 |||||||||||||||||||| Sbjct: 99145 cgccgcgggagatgccgagg 99164
>gb|AC079385.18| Homo sapiens 12q BAC RP11-482D24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181609 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccccaactctctcctccctg 175 |||||||||||||||||||| Sbjct: 49271 ccccaactctctcctccctg 49252
>gb|AC087711.5| Homo sapiens chromosome 8, clone RP11-172M18, complete sequence Length = 145905 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 ccttcccaccccaactctctcctc 171 ||||||||||||||||| |||||| Sbjct: 104146 ccttcccaccccaactcactcctc 104169
>emb|BX004804.10| Zebrafish DNA sequence from clone CH211-39M5 in linkage group 5, complete sequence Length = 170010 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 accccaactctctcctccct 174 |||||||||||||||||||| Sbjct: 168256 accccaactctctcctccct 168275
>emb|BX530075.7| Zebrafish DNA sequence from clone CH211-1O14 in linkage group 5, complete sequence Length = 176078 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 accccaactctctcctccct 174 |||||||||||||||||||| Sbjct: 78778 accccaactctctcctccct 78797
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 361 agggtgttcgacggaatgccacacagggacgtcgtcgcctggac 404 ||||||||||||| |||||| ||| |||| || ||| ||||||| Sbjct: 3023771 agggtgttcgacgaaatgccccaccgggatgtggtctcctggac 3023814
>dbj|AK108071.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-C07, full insert sequence Length = 1698 Score = 40.1 bits (20), Expect = 6.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 361 agggtgttcgacggaatgccacacagggacgtcgtcgcctggac 404 ||||||||||||| |||||| ||| |||| || ||| ||||||| Sbjct: 361 agggtgttcgacgaaatgccccaccgggatgtggtctcctggac 404
>dbj|AK106953.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-E06, full insert sequence Length = 1318 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 tgtactgcaagtgcggccgcctgg 349 |||||||||||||||||| ||||| Sbjct: 682 tgtactgcaagtgcggcctcctgg 705
>dbj|AK106615.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-H10, full insert sequence Length = 1897 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 cgccgcgggagatgccgagg 445 |||||||||||||||||||| Sbjct: 290 cgccgcgggagatgccgagg 271
>dbj|AK103426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128L01, full insert sequence Length = 2413 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 361 agggtgttcgacggaatgccacac 384 ||||||||||||| |||||||||| Sbjct: 413 agggtgttcgacgaaatgccacac 436
>emb|CT573363.8| Mouse DNA sequence from clone RP23-443F11 on chromosome 17, complete sequence Length = 86313 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 ccccaactctctcctccctg 175 |||||||||||||||||||| Sbjct: 42495 ccccaactctctcctccctg 42514
>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete sequence Length = 138387 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 cgccgcgggagatgccgagg 445 |||||||||||||||||||| Sbjct: 103209 cgccgcgggagatgccgagg 103228
>emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0103C06, complete sequence Length = 104146 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 cgccgcgggagatgccgagg 445 |||||||||||||||||||| Sbjct: 13542 cgccgcgggagatgccgagg 13561
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 361 agggtgttcgacggaatgccacac 384 ||||||||||||| |||||||||| Sbjct: 153868 agggtgttcgacgaaatgccacac 153845
>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130544 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 361 agggtgttcgacggaatgccacac 384 ||||||||||||| |||||||||| Sbjct: 123763 agggtgttcgacgaaatgccacac 123786
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 ctcctcgactcgctcctcaa 323 |||||||||||||||||||| Sbjct: 3277299 ctcctcgactcgctcctcaa 3277318 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,737,171 Number of Sequences: 3902068 Number of extensions: 2737171 Number of successful extensions: 53573 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 52617 Number of HSP's gapped (non-prelim): 951 length of query: 463 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 441 effective length of database: 17,147,199,772 effective search space: 7561915099452 effective search space used: 7561915099452 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
