Clone Name | bastl27d03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MYBPH_CHICK (Q05623) Myosin-binding protein H (MyBP-H) (H-protei... | 31 | 1.7 | 2 | MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosi... | 30 | 2.9 | 3 | YEAD_ECOLI (P39173) UPF0010 protein yeaD (Unknown protein from 2... | 29 | 6.6 |
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>MYBPH_CHICK (Q05623) Myosin-binding protein H (MyBP-H) (H-protein) (86 kDa| protein) Length = 537 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/66 (27%), Positives = 24/66 (36%) Frame = +1 Query: 88 HRPPPWSQTTETPPAPRQAEQGRTPTAQCXXXXXXXXXXXXSQRPLRRSISLTPQPEPFL 267 H P P ++T P P AEQ P A+ + P + + P PEP Sbjct: 68 HAPAPAAETPPAPEHPPDAEQPAAPAAEHAPTPTHEAAPAHEEGPPPAAPAEAPAPEPEP 127 Query: 268 AHPATE 285 P E Sbjct: 128 EKPKEE 133
>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3530 Score = 30.0 bits (66), Expect = 2.9 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +1 Query: 82 LRHRPPPWSQTTETPPAPR 138 LR PPPW+ PPAP+ Sbjct: 697 LRRHPPPWAAPAHVPPAPQ 715
>YEAD_ECOLI (P39173) UPF0010 protein yeaD (Unknown protein from 2D-page spots| T26/PR37) Length = 294 Score = 28.9 bits (63), Expect = 6.6 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -1 Query: 148 ALPASVPVAFPWFGSTAEGGVAA 80 A+ VPV +PWFG A+ G+ A Sbjct: 72 AIRGGVPVCWPWFGPAAQQGLPA 94 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,969,871 Number of Sequences: 219361 Number of extensions: 829605 Number of successful extensions: 3889 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3643 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3875 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)