ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl27d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC124552.3| Mus musculus BAC clone RP23-222M11 from chromosom... 44 0.30
2gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, c... 44 0.30
3gb|AC166654.1| Mus musculus BAC clone RP23-426B21 from chromosom... 44 0.30
4gb|AC133490.32| Rattus norvegicus clone rp32-162c1, complete seq... 44 0.30
5gb|AC102391.12| Mus musculus chromosome 18, clone RP24-62K22, co... 44 0.30
6gb|AC098645.3| Papio anubis clone RP41-470J23, complete sequence 44 0.30
7gb|AC016595.4| Homo sapiens chromosome 5 clone CTD-2012M11, comp... 44 0.30
8emb|BX546496.3| Mouse DNA sequence from clone RP24-85I16 on chro... 44 0.30
9emb|AL591913.14| Mouse DNA sequence from clone RP23-120A4 on chr... 44 0.30
10gb|AC166102.2| Mus musculus BAC clone RP23-397O23 from chromosom... 42 1.2
11gb|AC119834.12| Mus musculus chromosome 5, clone RP24-383P24, co... 42 1.2
12ref|NM_013875.2| Mus musculus phosphodiesterase 7B (Pde7b), mRNA 42 1.2
13gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, comp... 42 1.2
14gb|AC122373.4| Mus musculus BAC clone RP23-464E7 from chromosome... 42 1.2
15emb|AJ251859.1|MMU251859 Mus musculus mRNA for cAMP specific pho... 42 1.2
16emb|BX914212.8| Zebrafish DNA sequence from clone CH211-105P7 in... 42 1.2
17gb|AC087482.9| Homo sapiens chromosome 15, clone RP11-540N15, co... 42 1.2
18gb|AC008629.7| Homo sapiens chromosome 5 clone CTB-161M19, compl... 42 1.2
19gb|AC012568.7| Homo sapiens chromosome 15, clone RP11-342M21, co... 42 1.2
20gb|AC156017.2| Mus musculus BAC clone RP24-239B9 from chromosome... 42 1.2
21dbj|AK020137.1| Mus musculus 12 days embryo male wolffian duct i... 42 1.2
22gb|AC140776.6| Mus musculus chromosome 1, clone RP23-284K5, comp... 42 1.2
23dbj|AK035385.1| Mus musculus adult male urinary bladder cDNA, RI... 42 1.2
24gb|U96409.1| Human Xp22 contig of 3 PACS (R7-39D12, R7-134G1, R7... 42 1.2
25dbj|AK040876.1| Mus musculus adult male aorta and vein cDNA, RIK... 42 1.2
26gb|AC153559.4| Mus musculus 10 BAC RP23-86P1 (Roswell Park Cance... 42 1.2
27emb|BX005196.15| Zebrafish DNA sequence from clone CH211-142M16 ... 42 1.2
28emb|BX323582.13| Zebrafish DNA sequence from clone CH211-143E19 ... 42 1.2
29emb|BX000707.9| Zebrafish DNA sequence from clone DKEY-187I8, co... 42 1.2
30gb|AC154229.1| Mus musculus BAC clone RP24-155I8 from 17, comple... 42 1.2
31gb|AC124718.4| Mus musculus BAC clone RP23-373N7 from 1, complet... 42 1.2
32emb|CT009576.9| Mouse DNA sequence from clone RP23-36H10 on chro... 42 1.2
33emb|AL591208.24| Mouse DNA sequence from clone RP23-149I2 on chr... 42 1.2
34emb|AL671897.6| Mouse DNA sequence from clone RP23-250A14 on chr... 42 1.2
35gb|AC162799.4| Mus musculus BAC clone RP24-392E13 from chromosom... 40 4.7
36gb|AC115070.9| Mus musculus chromosome 5, clone RP24-406N3, comp... 40 4.7
37gb|AC122469.4| Mus musculus chromosome 6 clone RP24-318I5, compl... 40 4.7
38gb|AC131339.3| Mus musculus BAC clone RP23-226F20 from chromosom... 40 4.7
39gb|AC141880.3| Mus musculus BAC clone RP24-220N1 from chromosome... 40 4.7
40gb|AC165168.3| Mus musculus BAC clone RP23-12D3 from chromosome ... 40 4.7
41ref|XM_390707.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 4.7
42gb|AC125540.4| Mus musculus BAC clone RP23-229O18 from chromosom... 40 4.7
43gb|AC127289.4| Mus musculus BAC clone RP23-359O14 from chromosom... 40 4.7
44emb|BX649466.19| Zebrafish DNA sequence from clone DKEY-31C8 in ... 40 4.7
45gb|AC158923.4| Mus musculus chromosome 5, clone RP24-118B12, com... 40 4.7
46gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 4.7
47emb|BX511145.13| Zebrafish DNA sequence from clone DKEY-34N18 in... 40 4.7
48emb|CR387989.9| Zebrafish DNA sequence from clone DKEY-101P2 in ... 40 4.7
49gb|AC011509.8| Homo sapiens chromosome 19 clone CTD-2189E23, com... 40 4.7
50dbj|AK172262.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 4.7
51gb|AC155824.3| Mus musculus BAC clone RP23-136L1 from chromosome... 40 4.7
52dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
53dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
54dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 40 4.7
55dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
56dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
57dbj|AK111403.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.7
58gb|AC120429.6| Mus musculus chromosome 18, clone RP24-546J19, co... 40 4.7
59emb|BX294167.5| Zebrafish DNA sequence from clone CH211-244O18 i... 40 4.7
60gb|AC146598.4| Mus musculus BAC clone RP24-129K7 from 6, complet... 40 4.7
61gb|AC130815.4| Mus musculus BAC clone RP23-19E7 from 16, complet... 40 4.7
62gb|AF013143.1|AF013143 Stagnicola catascopium internal transcrib... 40 4.7
63gb|AF013142.1|AF013142 Stagnicola emarginata internal transcribe... 40 4.7
64gb|AF013141.1|AF013141 Stagnicola emarginata internal transcribe... 40 4.7
65gb|AF013138.1|AF013138 Stagnicola elodes internal transcribed sp... 40 4.7
66emb|AL772377.6| Mouse DNA sequence from clone RP23-141B15 on chr... 40 4.7
67emb|AL604043.11| Mouse DNA sequence from clone RP23-391H8 on chr... 40 4.7
68emb|AL669982.10| Mouse DNA sequence from clone RP23-297N24 on ch... 40 4.7
69gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7 
>gb|AC124552.3| Mus musculus BAC clone RP23-222M11 from chromosome 19, complete sequence
          Length = 237281

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 140    cgagcgagcaagcaagcgagcaagcg 165
              ||||||||||||||||||||| ||||
Sbjct: 179770 cgagcgagcaagcaagcgagcgagcg 179745



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 140    cgagcgagcaagcaagcgagcaagc 164
              ||||||||||||||||| |||||||
Sbjct: 179738 cgagcgagcaagcaagcaagcaagc 179714
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>gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, complete sequence
          Length = 225739

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 145    gagcaagcaagcgagcaagcgg 166
              ||||||||||||||||||||||
Sbjct: 218707 gagcaagcaagcgagcaagcgg 218728
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>gb|AC166654.1| Mus musculus BAC clone RP23-426B21 from chromosome 17, complete
             sequence
          Length = 185609

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 145   gagcaagcaagcgagcaagcgg 166
             ||||||||||||||||||||||
Sbjct: 76044 gagcaagcaagcgagcaagcgg 76065
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>gb|AC133490.32| Rattus norvegicus clone rp32-162c1, complete sequence
          Length = 97152

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 140   cgagcgagcaagcaagcgagcaagcg 165
             ||||| ||||||||||||||||||||
Sbjct: 80430 cgagcaagcaagcaagcgagcaagcg 80455



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 140   cgagcgagcaagcaagcgagcaagc 164
             ||||| |||||||||||||||||||
Sbjct: 80554 cgagcaagcaagcaagcgagcaagc 80578



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 140   cgagcgagcaagcaagcgagcaagc 164
             ||||| |||||||||||||||||||
Sbjct: 80474 cgagcaagcaagcaagcgagcaagc 80498



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 142   agcgagcaagcaagcgagcaagcg 165
             ||||||||||||||| ||||||||
Sbjct: 80568 agcgagcaagcaagcaagcaagcg 80591



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 142   agcgagcaagcaagcgagcaagcg 165
             ||||||||||||||| ||||||||
Sbjct: 80452 agcgagcaagcaagcaagcaagcg 80475
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>gb|AC102391.12| Mus musculus chromosome 18, clone RP24-62K22, complete sequence
          Length = 196455

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 142    agcgagcaagcaagcgagcaag 163
              ||||||||||||||||||||||
Sbjct: 127918 agcgagcaagcaagcgagcaag 127939
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>gb|AC098645.3| Papio anubis clone RP41-470J23, complete sequence
          Length = 193317

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 140    cgagcgagcaagcaagcgagca 161
              ||||||||||||||||||||||
Sbjct: 136233 cgagcgagcaagcaagcgagca 136254
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>gb|AC016595.4| Homo sapiens chromosome 5 clone CTD-2012M11, complete sequence
          Length = 131484

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 18    cctctcgtccctcctccctcttttcc 43
             ||||| ||||||||||||||||||||
Sbjct: 51967 cctcttgtccctcctccctcttttcc 51992
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>emb|BX546496.3| Mouse DNA sequence from clone RP24-85I16 on chromosome X, complete
            sequence
          Length = 89031

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 18   cctctcgtccctcctccctcttttccattc 47
            ||||| |||||||||||||||| |||||||
Sbjct: 8070 cctcttgtccctcctccctcttctccattc 8099
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>emb|AL591913.14| Mouse DNA sequence from clone RP23-120A4 on chromosome 15, complete
              sequence
          Length = 196812

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 140    cgagcgagcaagcaagcgagcaagcg 165
              ||||| ||||||||||||||||||||
Sbjct: 147063 cgagcaagcaagcaagcgagcaagcg 147038
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>gb|AC166102.2| Mus musculus BAC clone RP23-397O23 from chromosome 17, complete
            sequence
          Length = 204842

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 140  cgagcgagcaagcaagcgagcaagc 164
            ||||||||||||||||| |||||||
Sbjct: 1950 cgagcgagcaagcaagcaagcaagc 1926
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>gb|AC119834.12| Mus musculus chromosome 5, clone RP24-383P24, complete sequence
          Length = 223764

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 140    cgagcgagcaagcaagcgagcaagc 164
              ||||||||||||||||| |||||||
Sbjct: 128375 cgagcgagcaagcaagcaagcaagc 128399
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>ref|NM_013875.2| Mus musculus phosphodiesterase 7B (Pde7b), mRNA
          Length = 4140

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 140 cgagcgagcaagcaagcgagc 160
           |||||||||||||||||||||
Sbjct: 113 cgagcgagcaagcaagcgagc 93
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>gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, complete sequence
          Length = 289751

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 141    gagcgagcaagcaagcgagcaagcg 165
              |||||||||||||||| ||||||||
Sbjct: 125152 gagcgagcaagcaagcaagcaagcg 125176



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 141    gagcgagcaagcaagcgagcaagc 164
              |||||||||||||||| |||||||
Sbjct: 125192 gagcgagcaagcaagcaagcaagc 125215
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>gb|AC122373.4| Mus musculus BAC clone RP23-464E7 from chromosome 13, complete sequence
          Length = 192969

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 141    gagcgagcaagcaagcgagcaagcg 165
              |||||||||||| ||||||||||||
Sbjct: 123028 gagcgagcaagcgagcgagcaagcg 123052
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>emb|AJ251859.1|MMU251859 Mus musculus mRNA for cAMP specific phosphodiesterase 7B (PDE7B
           gene)
          Length = 2725

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 140 cgagcgagcaagcaagcgagc 160
           |||||||||||||||||||||
Sbjct: 154 cgagcgagcaagcaagcgagc 134
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>emb|BX914212.8| Zebrafish DNA sequence from clone CH211-105P7 in linkage group 18,
             complete sequence
          Length = 67940

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 137   tcccgagcgagcaagcaagcg 157
             |||||||||||||||||||||
Sbjct: 27416 tcccgagcgagcaagcaagcg 27396
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>gb|AC087482.9| Homo sapiens chromosome 15, clone RP11-540N15, complete sequence
          Length = 194546

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 140    cgagcgagcaagcaagcgagcaagc 164
              ||||||||||||||||| |||||||
Sbjct: 192638 cgagcgagcaagcaagcaagcaagc 192662
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>gb|AC008629.7| Homo sapiens chromosome 5 clone CTB-161M19, complete sequence
          Length = 151881

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 140   cgagcgagcaagcaagcgagcaagc 164
             ||||||||||||||||| |||||||
Sbjct: 25589 cgagcgagcaagcaagcaagcaagc 25565
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>gb|AC012568.7| Homo sapiens chromosome 15, clone RP11-342M21, complete sequence
          Length = 166785

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 140   cgagcgagcaagcaagcgagcaagc 164
             ||||||||||||||||| |||||||
Sbjct: 13610 cgagcgagcaagcaagcaagcaagc 13634
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>gb|AC156017.2| Mus musculus BAC clone RP24-239B9 from chromosome 16, complete
            sequence
          Length = 166416

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 140  cgagcgagcaagcaagcgagcaagc 164
            ||||||||||||||||| |||||||
Sbjct: 9744 cgagcgagcaagcaagcaagcaagc 9768



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 142  agcgagcaagcaagcgagcaagcg 165
            ||||||||||||||||||| ||||
Sbjct: 9714 agcgagcaagcaagcgagcgagcg 9737



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 146  agcaagcaagcgagcaagcg 165
            ||||||||||||||||||||
Sbjct: 9690 agcaagcaagcgagcaagcg 9709
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>dbj|AK020137.1| Mus musculus 12 days embryo male wolffian duct includes surrounding
           region cDNA, RIKEN full-length enriched library,
           clone:6720462I12 product:phosphodiesterase 7B, full
           insert sequence
          Length = 550

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 140 cgagcgagcaagcaagcgagc 160
           |||||||||||||||||||||
Sbjct: 66  cgagcgagcaagcaagcgagc 46
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>gb|AC140776.6| Mus musculus chromosome 1, clone RP23-284K5, complete sequence
          Length = 223196

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 140    cgagcgagcaagcaagcgagcaagc 164
              ||||||||||||||||| |||||||
Sbjct: 107718 cgagcgagcaagcaagcaagcaagc 107742
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>dbj|AK035385.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
           enriched library, clone:9530027O16
           product:phosphodiesterase 7B, full insert sequence
          Length = 4140

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 140 cgagcgagcaagcaagcgagc 160
           |||||||||||||||||||||
Sbjct: 113 cgagcgagcaagcaagcgagc 93
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>gb|U96409.1| Human Xp22 contig of 3 PACS (R7-39D12, R7-134G1, R7-185L21) from the
            Roswell Park Cancer Institute, complete sequence
          Length = 169465

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 25   tccctcctccctcttttccattctc 49
            ||||||||||||||||| |||||||
Sbjct: 4560 tccctcctccctctttttcattctc 4536
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>dbj|AK040876.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
           enriched library, clone:A530032L19 product:hypothetical
           protein, full insert sequence
          Length = 2737

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 140 cgagcgagcaagcaagcgagc 160
           |||||||||||||||||||||
Sbjct: 67  cgagcgagcaagcaagcgagc 47
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>gb|AC153559.4| Mus musculus 10 BAC RP23-86P1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 185708

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 140    cgagcgagcaagcaagcgagc 160
              |||||||||||||||||||||
Sbjct: 156493 cgagcgagcaagcaagcgagc 156513
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>emb|BX005196.15| Zebrafish DNA sequence from clone CH211-142M16 in linkage group 12,
             complete sequence
          Length = 187209

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 137   tcccgagcgagcaagcaagcg 157
             |||||||||||||||||||||
Sbjct: 54601 tcccgagcgagcaagcaagcg 54621
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>emb|BX323582.13| Zebrafish DNA sequence from clone CH211-143E19 in linkage group 18,
             complete sequence
          Length = 80226

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 137   tcccgagcgagcaagcaagcg 157
             |||||||||||||||||||||
Sbjct: 33406 tcccgagcgagcaagcaagcg 33426
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>emb|BX000707.9| Zebrafish DNA sequence from clone DKEY-187I8, complete sequence
          Length = 194542

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 137    tcccgagcgagcaagcaagcg 157
              |||||||||||||||||||||
Sbjct: 166583 tcccgagcgagcaagcaagcg 166603
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>gb|AC154229.1| Mus musculus BAC clone RP24-155I8 from 17, complete sequence
          Length = 159982

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 140   cgagcgagcaagcaagcgagcaagc 164
             ||||||||||||||||| |||||||
Sbjct: 46968 cgagcgagcaagcaagcaagcaagc 46992
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>gb|AC124718.4| Mus musculus BAC clone RP23-373N7 from 1, complete sequence
          Length = 201807

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 140    cgagcgagcaagcaagcgagcaagc 164
              ||||||||||||||||| |||||||
Sbjct: 151353 cgagcgagcaagcaagcaagcaagc 151329
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>emb|CT009576.9| Mouse DNA sequence from clone RP23-36H10 on chromosome 16, complete
              sequence
          Length = 256007

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 140    cgagcgagcaagcaagcgagcaagc 164
              ||||||||||||||||| |||||||
Sbjct: 110198 cgagcgagcaagcaagcaagcaagc 110222



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 142    agcgagcaagcaagcgagcaagcg 165
              ||||||||||||||||||| ||||
Sbjct: 110168 agcgagcaagcaagcgagcgagcg 110191



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    agcaagcaagcgagcaagcg 165
              ||||||||||||||||||||
Sbjct: 110144 agcaagcaagcgagcaagcg 110163
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>emb|AL591208.24| Mouse DNA sequence from clone RP23-149I2 on chromosome 12, complete
              sequence
          Length = 199854

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 141    gagcgagcaagcaagcgagcaagcg 165
              |||||||||||||||| ||||||||
Sbjct: 180432 gagcgagcaagcaagcaagcaagcg 180408



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 141    gagcgagcaagcaagcgagcaagc 164
              |||||||||||||||| |||||||
Sbjct: 180392 gagcgagcaagcaagcaagcaagc 180369
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>emb|AL671897.6| Mouse DNA sequence from clone RP23-250A14 on chromosome X, complete
             sequence
          Length = 105208

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 140   cgagcgagcaagcaagcgagcaagc 164
             ||||||||||||||||| |||||||
Sbjct: 96994 cgagcgagcaagcaagcaagcaagc 96970
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>gb|AC162799.4| Mus musculus BAC clone RP24-392E13 from chromosome 3, complete sequence
          Length = 177586

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 141   gagcgagcaagcaagcgagcaagc 164
             |||||||||||||||| |||||||
Sbjct: 33245 gagcgagcaagcaagcaagcaagc 33268
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>gb|AC115070.9| Mus musculus chromosome 5, clone RP24-406N3, complete sequence
          Length = 148789

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 298    cgaaggtggggtcgtcgtcgctgc 321
              |||||||||||||||| |||||||
Sbjct: 145028 cgaaggtggggtcgtcttcgctgc 145051
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>gb|AC122469.4| Mus musculus chromosome 6 clone RP24-318I5, complete sequence
          Length = 181769

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 141   gagcgagcaagcaagcgagcaagc 164
             |||||||||||||||| |||||||
Sbjct: 18707 gagcgagcaagcaagcaagcaagc 18684
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>gb|AC131339.3| Mus musculus BAC clone RP23-226F20 from chromosome 16, complete
             sequence
          Length = 180384

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    gtccctcctccctcttttcc 43
             ||||||||||||||||||||
Sbjct: 87102 gtccctcctccctcttttcc 87121
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>gb|AC141880.3| Mus musculus BAC clone RP24-220N1 from chromosome 15, complete sequence
          Length = 185646

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     cctctcgtccctcctccctc 37
              ||||||||||||||||||||
Sbjct: 158984 cctctcgtccctcctccctc 158965
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>gb|AC165168.3| Mus musculus BAC clone RP23-12D3 from chromosome 19, complete sequence
          Length = 215151

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    cgagcgagcaagcaagcgag 159
              ||||||||||||||||||||
Sbjct: 121838 cgagcgagcaagcaagcgag 121857
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>ref|XM_390707.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10531.1)
           partial mRNA
          Length = 1944

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 173 catcgccaccgattggcggcttgcttcgcttg 204
           ||||||||||| |||| || ||||||||||||
Sbjct: 372 catcgccaccgcttggtggattgcttcgcttg 403
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>gb|AC125540.4| Mus musculus BAC clone RP23-229O18 from chromosome 15, complete sequence
          Length = 162455

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     cctctcgtccctcctccctc 37
              ||||||||||||||||||||
Sbjct: 153704 cctctcgtccctcctccctc 153723
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>gb|AC127289.4| Mus musculus BAC clone RP23-359O14 from chromosome 19, complete sequence
          Length = 203047

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 140    cgagcgagcaagcaagcgag 159
              ||||||||||||||||||||
Sbjct: 199724 cgagcgagcaagcaagcgag 199743
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>emb|BX649466.19| Zebrafish DNA sequence from clone DKEY-31C8 in linkage group 12,
             complete sequence
          Length = 101015

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   tcccgagcgagcaagcaagc 156
             ||||||||||||||||||||
Sbjct: 91594 tcccgagcgagcaagcaagc 91575
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>gb|AC158923.4| Mus musculus chromosome 5, clone RP24-118B12, complete sequence
          Length = 167699

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 298   cgaaggtggggtcgtcgtcgctgc 321
             |||||||||||||||| |||||||
Sbjct: 87213 cgaaggtggggtcgtcttcgctgc 87190
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 165     ggcgaaaccatcgccaccga 184
               ||||||||||||||||||||
Sbjct: 3260686 ggcgaaaccatcgccaccga 3260705
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>emb|BX511145.13| Zebrafish DNA sequence from clone DKEY-34N18 in linkage group 17,
             complete sequence
          Length = 102544

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 137   tcccgagcgagcaagcaagcgagcaagc 164
             |||||||||||||||| ||| |||||||
Sbjct: 17734 tcccgagcgagcaagcgagcaagcaagc 17707
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>emb|CR387989.9| Zebrafish DNA sequence from clone DKEY-101P2 in linkage group 18,
             complete sequence
          Length = 96438

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   tcccgagcgagcaagcaagc 156
             ||||||||||||||||||||
Sbjct: 94052 tcccgagcgagcaagcaagc 94033
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>gb|AC011509.8| Homo sapiens chromosome 19 clone CTD-2189E23, complete sequence
          Length = 111998

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 141   gagcgagcaagcaagcgagcaagc 164
             |||||||||||||||| |||||||
Sbjct: 87577 gagcgagcaagcaagcaagcaagc 87554
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>dbj|AK172262.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830111E09 product:unclassifiable, full
           insert sequence
          Length = 1610

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  cctctcgtccctcctccctc 37
           ||||||||||||||||||||
Sbjct: 752 cctctcgtccctcctccctc 771
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>gb|AC155824.3| Mus musculus BAC clone RP23-136L1 from chromosome 8, complete sequence
          Length = 220437

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 140    cgagcgagcaagcaagcgagcaag 163
              ||||||||| ||||||||||||||
Sbjct: 163804 cgagcgagcgagcaagcgagcaag 163827
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 143     gcgagcaagcaagcgagcaa 162
               ||||||||||||||||||||
Sbjct: 5274390 gcgagcaagcaagcgagcaa 5274371
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 142      agcgagcaagcaagcgagcaagcg 165
                ||||||||||||||||||| ||||
Sbjct: 19255665 agcgagcaagcaagcgagcgagcg 19255642
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>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 322     tgatcgggtgctggccgatg 341
               ||||||||||||||||||||
Sbjct: 1133472 tgatcgggtgctggccgatg 1133491
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>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0458B05
          Length = 144917

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 142   agcgagcaagcaagcgagcaagcg 165
             ||||||||||||||||||| ||||
Sbjct: 23463 agcgagcaagcaagcgagcgagcg 23440
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>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0415B12
          Length = 157419

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 142    agcgagcaagcaagcgagcaagcg 165
              ||||||||||||||||||| ||||
Sbjct: 153914 agcgagcaagcaagcgagcgagcg 153891
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>dbj|AK111403.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-E05, full
           insert sequence
          Length = 1493

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 143 gcgagcaagcaagcgagcaa 162
           ||||||||||||||||||||
Sbjct: 788 gcgagcaagcaagcgagcaa 769
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>gb|AC120429.6| Mus musculus chromosome 18, clone RP24-546J19, complete sequence
          Length = 147268

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 141    gagcgagcaagcaagcgagcaagc 164
              |||||||||||||||| |||||||
Sbjct: 137422 gagcgagcaagcaagcaagcaagc 137399
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>emb|BX294167.5| Zebrafish DNA sequence from clone CH211-244O18 in linkage group 5,
             complete sequence
          Length = 191302

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   tcccgagcgagcaagcaagc 156
             ||||||||||||||||||||
Sbjct: 28196 tcccgagcgagcaagcaagc 28215
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>gb|AC146598.4| Mus musculus BAC clone RP24-129K7 from 6, complete sequence
          Length = 168141

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 141   gagcgagcaagcaagcgagcaagc 164
             |||||||||||||||| |||||||
Sbjct: 97799 gagcgagcaagcaagcaagcaagc 97776
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>gb|AC130815.4| Mus musculus BAC clone RP23-19E7 from 16, complete sequence
          Length = 195188

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 140    cgagcgagcaagcaagcgagcaag 163
              ||||||||||||||||| ||||||
Sbjct: 108457 cgagcgagcaagcaagcaagcaag 108480
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>gb|AF013143.1|AF013143 Stagnicola catascopium internal transcribed spacer 1, 5.8S
           ribosomal RNA gene, and internal transcribed spacer 2,
           complete sequence
          Length = 1143

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 agcgagcaagcaagcgagca 161
           ||||||||||||||||||||
Sbjct: 334 agcgagcaagcaagcgagca 315
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>gb|AF013142.1|AF013142 Stagnicola emarginata internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence
          Length = 1147

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 agcgagcaagcaagcgagca 161
           ||||||||||||||||||||
Sbjct: 334 agcgagcaagcaagcgagca 315
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>gb|AF013141.1|AF013141 Stagnicola emarginata internal transcribed spacer 1, 5.8S ribosomal
           RNA gene, and internal transcribed spacer 2, complete
           sequence
          Length = 1147

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 agcgagcaagcaagcgagca 161
           ||||||||||||||||||||
Sbjct: 335 agcgagcaagcaagcgagca 316
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>gb|AF013138.1|AF013138 Stagnicola elodes internal transcribed spacer 1, 5.8S ribosomal RNA
           gene, and internal transcribed spacer 2, complete
           sequence
          Length = 1146

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 agcgagcaagcaagcgagca 161
           ||||||||||||||||||||
Sbjct: 335 agcgagcaagcaagcgagca 316
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>emb|AL772377.6| Mouse DNA sequence from clone RP23-141B15 on chromosome 2, complete
             sequence
          Length = 217837

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 141   gagcgagcaagcaagcgagcaagc 164
             ||||||||||||||| ||||||||
Sbjct: 37318 gagcgagcaagcaagtgagcaagc 37295
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>emb|AL604043.11| Mouse DNA sequence from clone RP23-391H8 on chromosome 11, complete
              sequence
          Length = 221374

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 142    agcgagcaagcaagcgagcaagcg 165
              ||||||||||||||| ||||||||
Sbjct: 153179 agcgagcaagcaagcaagcaagcg 153156
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>emb|AL669982.10| Mouse DNA sequence from clone RP23-297N24 on chromosome 4, complete
             sequence
          Length = 240125

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   agcaagcaagcgagcaagcg 165
             ||||||||||||||||||||
Sbjct: 58831 agcaagcaagcgagcaagcg 58850
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>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12,
             complete sequence
          Length = 88725

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   gcgagcaagcaagcgagcaa 162
             ||||||||||||||||||||
Sbjct: 11091 gcgagcaagcaagcgagcaa 11072


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,880,776
Number of Sequences: 3902068
Number of extensions: 1880776
Number of successful extensions: 52450
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52065
Number of HSP's gapped (non-prelim): 383
length of query: 356
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 334
effective length of database: 17,147,199,772
effective search space: 5727164723848
effective search space used: 5727164723848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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