ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl27c09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185137.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2834 Score = 107 bits (54), Expect = 2e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 239 aacaagttccgccagcgcgaggccagcgacgacatgctcggctacccccaccttgatgaa 298 ||||||||||| ||||||||||||| |||||||||||| || |||||||||||||||||| Sbjct: 85 aacaagttccggcagcgcgaggccaccgacgacatgcttggatacccccaccttgatgaa 144 Query: 299 gatgcattgttgagtaccaagtgtcc 324 ||||| || |||| ||||||||||| Sbjct: 145 gatgctttattgaagaccaagtgtcc 170
>dbj|AK067902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121O19, full insert sequence Length = 3031 Score = 107 bits (54), Expect = 2e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 239 aacaagttccgccagcgcgaggccagcgacgacatgctcggctacccccaccttgatgaa 298 ||||||||||| ||||||||||||| |||||||||||| || |||||||||||||||||| Sbjct: 234 aacaagttccggcagcgcgaggccaccgacgacatgcttggatacccccaccttgatgaa 293 Query: 299 gatgcattgttgagtaccaagtgtcc 324 ||||| || |||| ||||||||||| Sbjct: 294 gatgctttattgaagaccaagtgtcc 319 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Plus Query: 152 cagatgcgtcccctcctcgccctcgc 177 ||||||||||||||||||||| |||| Sbjct: 147 cagatgcgtcccctcctcgccttcgc 172
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 73.8 bits (37), Expect = 3e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 239 aacaagttccgccagcgcgaggccagcgacgacatgctcggctacccccacct 291 ||||||||||| ||||||||||||| |||||||||||| || ||||||||||| Sbjct: 34376355 aacaagttccggcagcgcgaggccaccgacgacatgcttggatacccccacct 34376407 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Plus Query: 152 cagatgcgtcccctcctcgccctcgc 177 ||||||||||||||||||||| |||| Sbjct: 34376268 cagatgcgtcccctcctcgccttcgc 34376293 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gctcgcccgctcgcccgccg 75 |||||||||||||||||||| Sbjct: 7035407 gctcgcccgctcgcccgccg 7035426
>gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic sequence, complete sequence Length = 115393 Score = 73.8 bits (37), Expect = 3e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 239 aacaagttccgccagcgcgaggccagcgacgacatgctcggctacccccacct 291 ||||||||||| ||||||||||||| |||||||||||| || ||||||||||| Sbjct: 73339 aacaagttccggcagcgcgaggccaccgacgacatgcttggatacccccacct 73287 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Minus Query: 152 cagatgcgtcccctcctcgccctcgc 177 ||||||||||||||||||||| |||| Sbjct: 73426 cagatgcgtcccctcctcgccttcgc 73401
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 73.8 bits (37), Expect = 3e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 239 aacaagttccgccagcgcgaggccagcgacgacatgctcggctacccccacct 291 ||||||||||| ||||||||||||| |||||||||||| || ||||||||||| Sbjct: 34466827 aacaagttccggcagcgcgaggccaccgacgacatgcttggatacccccacct 34466879 Score = 44.1 bits (22), Expect = 0.27 Identities = 25/26 (96%) Strand = Plus / Plus Query: 152 cagatgcgtcccctcctcgccctcgc 177 ||||||||||||||||||||| |||| Sbjct: 34466740 cagatgcgtcccctcctcgccttcgc 34466765 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gctcgcccgctcgcccgccg 75 |||||||||||||||||||| Sbjct: 7033302 gctcgcccgctcgcccgccg 7033321
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 46.1 bits (23), Expect = 0.069 Identities = 23/23 (100%) Strand = Plus / Minus Query: 243 agttccgccagcgcgaggccagc 265 ||||||||||||||||||||||| Sbjct: 398860 agttccgccagcgcgaggccagc 398838
>ref|XM_483075.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1392 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 tcgcggagggcgcggccgccg 212 ||||||||||||||||||||| Sbjct: 1175 tcgcggagggcgcggccgccg 1195
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 196 ggagggcgcggccgccgcgggggaggatg 224 ||||||||| | ||||||||||||||||| Sbjct: 392876 ggagggcgcaggcgccgcgggggaggatg 392904
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 tcgcggagggcgcggccgccg 212 ||||||||||||||||||||| Sbjct: 24160762 tcgcggagggcgcggccgccg 24160742 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cccctcctcgccctcgccgt 180 |||||||||||||||||||| Sbjct: 23078799 cccctcctcgccctcgccgt 23078818
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 cgcccgctcgcccgccgggccgaga 83 |||||||||||||| |||||||||| Sbjct: 4739168 cgcccgctcgcccggcgggccgaga 4739192 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 gcgcggccgccgcgggggagg 221 ||||||||||||||||||||| Sbjct: 4339446 gcgcggccgccgcgggggagg 4339426 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgcccgctcgcccgccgggc 78 |||||||||||||||||||| Sbjct: 1661056 cgcccgctcgcccgccgggc 1661075
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 cccctcctcgccctcgccgtg 181 ||||||||||||||||||||| Sbjct: 987395 cccctcctcgccctcgccgtg 987375 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgctcgcccgccgggccgag 82 |||||||||||||||||||| Sbjct: 630334 cgctcgcccgccgggccgag 630353
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 tcgcggagggcgcggccgccg 212 ||||||||||||||||||||| Sbjct: 27101 tcgcggagggcgcggccgccg 27081
>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0028A08 Length = 150818 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 tcgcggagggcgcggccgccg 212 ||||||||||||||||||||| Sbjct: 114248 tcgcggagggcgcggccgccg 114228
>gb|AC152987.1| Mus musculus 6 BAC RP23-133N21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196532 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gctcgcccgctcgcccgccg 75 |||||||||||||||||||| Sbjct: 68967 gctcgcccgctcgcccgccg 68986
>ref|XM_474423.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1650 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 188 cttctcgcggagggcgcggccgccgcgg 215 |||||||||| ||| ||||||||||||| Sbjct: 937 cttctcgcggcgggagcggccgccgcgg 910
>ref|XM_477322.1| Oryza sativa (japonica cultivar-group), mRNA Length = 816 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gctcgcccgctcgcccgccg 75 |||||||||||||||||||| Sbjct: 370 gctcgcccgctcgcccgccg 351
>ref|NM_133303.1| Rattus norvegicus basic helix-loop-helix domain containing, class B3 (Bhlhb3), mRNA Length = 3101 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 agggcgcggccgccgcgggg 217 |||||||||||||||||||| Sbjct: 1212 agggcgcggccgccgcgggg 1193
>gb|AC148880.2| Chlamydomonas reinhardtii clone cr-40F11, complete sequence Length = 56458 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ggagggcgcggccgccgcgg 215 |||||||||||||||||||| Sbjct: 37249 ggagggcgcggccgccgcgg 37230
>gb|AY427787.1| Bos taurus paternally expressed gene 3 (Peg3) mRNA, complete cds Length = 11076 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 ggagggcgcggccgccgcgg 215 |||||||||||||||||||| Sbjct: 6897 ggagggcgcggccgccgcgg 6916
>ref|XM_001006286.1| PREDICTED: Mus musculus similar to paternally expressed 3 (LOC677625), mRNA Length = 1116 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 ggagggcgcggccgccgcgg 215 |||||||||||||||||||| Sbjct: 471 ggagggcgcggccgccgcgg 490
>ref|XM_980776.1| PREDICTED: Mus musculus hypothetical protein LOC665995 (LOC665995), mRNA Length = 545 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gctcgcccgctcgcccgccg 75 |||||||||||||||||||| Sbjct: 351 gctcgcccgctcgcccgccg 332
>ref|XM_991466.1| PREDICTED: Mus musculus hypothetical protein LOC667614 (LOC667614), mRNA Length = 1056 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 agggcgcggccgccgcgggg 217 |||||||||||||||||||| Sbjct: 300 agggcgcggccgccgcgggg 281
>emb|Z35639.1|CED2045 Caenorhabditis elegans Cosmid D2045, complete sequence Length = 37249 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tcctccgagtccgtcctcct 24 |||||||||||||||||||| Sbjct: 11272 tcctccgagtccgtcctcct 11253
>emb|BX883045.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 4/11 Length = 346406 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 ggacccctaggctcctctgg 148 |||||||||||||||||||| Sbjct: 115940 ggacccctaggctcctctgg 115921
>emb|AL645950.13| Mouse DNA sequence from clone RP23-13C17 on chromosome 1 Contains the Eef1b2 gene for eukaryotic translation elongation factor 1 beta 2, the Ndufs1 gene for NADH dehydrogenase (ubiquinone) Fe-S protein 1 (Ndufs1), the Gpr1 gene for G-protein coupled receptor 1, the 5' end of a novel gene, two novel genes and two CpG islands, complete sequence Length = 138564 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 agggcgcggccgccgcgggg 217 |||||||||||||||||||| Sbjct: 9043 agggcgcggccgccgcgggg 9062
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 cttctcgcggagggcgcggccgccgcgg 215 |||||||||| ||| ||||||||||||| Sbjct: 3833 cttctcgcggcgggagcggccgccgcgg 3860
>emb|AJ421477.1|MDI421477 Methylobacterium dichloromethanicum mtdB gene, mchA gene, fae gene for Hypothetical protein, fae gene and ORF1-5, strain DM4 (DSM6343) Length = 7038 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 tcgccgccgcctcgtcgcgaccgc 120 ||||||||||||||||||| |||| Sbjct: 1592 tcgccgccgcctcgtcgcggccgc 1569
>gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0008A05, complete sequence Length = 124366 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ggagggcgcggccgccgcgg 215 |||||||||||||||||||| Sbjct: 111049 ggagggcgcggccgccgcgg 111030
>gb|AC092733.18| Homo sapiens chromosome 11, clone RP11-193F22, complete sequence Length = 195538 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gtcccctcctcgccctcgcc 178 |||||||||||||||||||| Sbjct: 152085 gtcccctcctcgccctcgcc 152066
>gb|AC063949.21| Homo sapiens 12 BAC RP11-693J15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172984 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 tgaagatgcattgttgagta 314 |||||||||||||||||||| Sbjct: 65252 tgaagatgcattgttgagta 65271
>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11, complete sequence Length = 123620 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gctcgcccgctcgcccgccg 75 |||||||||||||||||||| Sbjct: 46958 gctcgcccgctcgcccgccg 46939
>ref|NM_001026060.1| Caenorhabditis elegans human ATX (ataxin) related family member (atx-2) (atx-2) mRNA, complete cds Length = 3612 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tcctccgagtccgtcctcct 24 |||||||||||||||||||| Sbjct: 490 tcctccgagtccgtcctcct 471
>ref|NM_001026059.1| Caenorhabditis elegans human ATX (ataxin) related family member (atx-2) (atx-2) mRNA, complete cds Length = 3612 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tcctccgagtccgtcctcct 24 |||||||||||||||||||| Sbjct: 490 tcctccgagtccgtcctcct 471
>gb|AF009329.1|AF009329 Rattus norvegicus enhancer-of-split and hairy-related protein 1 (SHARP-1) mRNA, complete cds Length = 3101 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 agggcgcggccgccgcgggg 217 |||||||||||||||||||| Sbjct: 1212 agggcgcggccgccgcgggg 1193
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 cttctcgcggagggcgcggccgccgcgg 215 |||||||||| ||| ||||||||||||| Sbjct: 35067330 cttctcgcggcgggagcggccgccgcgg 35067357
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ggagggcgcggccgccgcgg 215 |||||||||||||||||||| Sbjct: 8906442 ggagggcgcggccgccgcgg 8906423
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gctcgcccgctcgcccgccg 75 |||||||||||||||||||| Sbjct: 9443786 gctcgcccgctcgcccgccg 9443767
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 192 tcgcggagggcgcggccgccgcggggga 219 |||||||||||||||||| || |||||| Sbjct: 12957012 tcgcggagggcgcggccgtcgaggggga 12956985
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 cggctcgcccgctcgcccgc 73 |||||||||||||||||||| Sbjct: 29774461 cggctcgcccgctcgcccgc 29774442
>emb|BX933173.1| Gallus gallus finished cDNA, clone ChEST848h23 Length = 1124 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 cccggctcgcccgctcgcccgccg 75 |||||||||||||| ||||||||| Sbjct: 5 cccggctcgcccgcccgcccgccg 28
>ref|XM_579618.1| PREDICTED: Rattus norvegicus basic helix-loop-helix domain containing, class B3 (Bhlhb3), mRNA Length = 2856 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 agggcgcggccgccgcgggg 217 |||||||||||||||||||| Sbjct: 1083 agggcgcggccgccgcgggg 1064
>dbj|AP006267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0004F07 Length = 135890 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gctcgcccgctcgcccgccg 75 |||||||||||||||||||| Sbjct: 114654 gctcgcccgctcgcccgccg 114635
>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461F06 Length = 147891 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cccctcctcgccctcgccgt 180 |||||||||||||||||||| Sbjct: 1898 cccctcctcgccctcgccgt 1917
>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2056_H01 Length = 123428 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 cggctcgcccgctcgcccgc 73 |||||||||||||||||||| Sbjct: 30806 cggctcgcccgctcgcccgc 30787
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1191_G08 Length = 172832 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 cggctcgcccgctcgcccgc 73 |||||||||||||||||||| Sbjct: 143440 cggctcgcccgctcgcccgc 143421
>dbj|AB126167.1| Mus musculus BHLHB3 gene for bHLH transcriptional factor Dec2, complete cds Length = 13281 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 agggcgcggccgccgcgggg 217 |||||||||||||||||||| Sbjct: 10192 agggcgcggccgccgcgggg 10173
>dbj|AP003619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0577H07 Length = 126757 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 192 tcgcggagggcgcggccgccgcggggga 219 |||||||||||||||||| || |||||| Sbjct: 39389 tcgcggagggcgcggccgtcgaggggga 39362
>dbj|AP006447.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1100H02 Length = 128773 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gctcgcccgctcgcccgccg 75 |||||||||||||||||||| Sbjct: 25772 gctcgcccgctcgcccgccg 25753
>ref|NM_001002887.1| Bos taurus paternally expressed gene 3 (PEG3), mRNA Length = 11076 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 ggagggcgcggccgccgcgg 215 |||||||||||||||||||| Sbjct: 6897 ggagggcgcggccgccgcgg 6916
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cccctcctcgccctcgccgt 180 |||||||||||||||||||| Sbjct: 138527 cccctcctcgccctcgccgt 138546
>gb|AY739305.1| Zea mays thiol oxidoreductase (TEL1) mRNA, complete cds Length = 2018 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 gcgtcccctcctcgccctcgccgt 180 ||||| |||||||||||||||||| Sbjct: 187 gcgtctcctcctcgccctcgccgt 210
>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete sequence Length = 112897 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 cttctcgcggagggcgcggccgccgcgg 215 |||||||||| ||| ||||||||||||| Sbjct: 22063 cttctcgcggcgggagcggccgccgcgg 22090
>gb|AY571963.1| Caenorhabditis elegans ATX-2 (atx-2) mRNA, complete cds Length = 3634 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tcctccgagtccgtcctcct 24 |||||||||||||||||||| Sbjct: 512 tcctccgagtccgtcctcct 493
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 cgcggagggcgcggccgccgcggg 216 ||||| |||||||||||||||||| Sbjct: 2462257 cgcggcgggcgcggccgccgcggg 2462280
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ggagggcgcggccgccgcgg 215 |||||||||||||||||||| Sbjct: 8911581 ggagggcgcggccgccgcgg 8911562
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 cttctcgcggagggcgcggccgccgcgg 215 |||||||||| ||| ||||||||||||| Sbjct: 126377 cttctcgcggcgggagcggccgccgcgg 126404
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 cgctcgcccgccgggccgag 82 |||||||||||||||||||| Sbjct: 292495 cgctcgcccgccgggccgag 292514
>gb|AC144936.4| Mus musculus BAC clone RP24-238C11 from 6, complete sequence Length = 174789 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 agggcgcggccgccgcgggg 217 |||||||||||||||||||| Sbjct: 133274 agggcgcggccgccgcgggg 133255
>ref|NM_024469.1| Mus musculus basic helix-loop-helix domain containing, class B3 (Bhlhb3), mRNA Length = 1421 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 agggcgcggccgccgcgggg 217 |||||||||||||||||||| Sbjct: 1049 agggcgcggccgccgcgggg 1030
>dbj|AB044090.1| Mus musculus mRNA for bHLH protein DEC2, complete cds Length = 1421 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 agggcgcggccgccgcgggg 217 |||||||||||||||||||| Sbjct: 1049 agggcgcggccgccgcgggg 1030 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,400,928 Number of Sequences: 3902068 Number of extensions: 2400928 Number of successful extensions: 61234 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59305 Number of HSP's gapped (non-prelim): 1929 length of query: 324 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 302 effective length of database: 17,147,199,772 effective search space: 5178454331144 effective search space used: 5178454331144 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
