ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl27c05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 103 bits (52), Expect = 5e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 377 tacgtggagatcaccctggacgtgagggacgactcggtggcggtgcacagcgtgaagccg 436 ||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||| Sbjct: 194766 tacgtggagatcaccctcgacgtgcgcgacgactcggtggcggtgcacagcgtgaagccg 194707 Query: 437 gcgg 440 |||| Sbjct: 194706 gcgg 194703 Score = 58.0 bits (29), Expect = 3e-05 Identities = 70/83 (84%), Gaps = 3/83 (3%) Strand = Plus / Minus Query: 239 gtgccgcacagcgggcctctgggcgggaagcggtccgccatgcgcaagagcgcgcggttc 298 ||||||||||||||||| ||| || ||| |||||| ||| | ||||||||| ||||| Sbjct: 194916 gtgccgcacagcgggccactgagc---aagaggtccgggatgaggaagagcgcgaggttc 194860 Query: 299 gccgagtccgtgtcggcgccgct 321 || ||||| |||||||||||||| Sbjct: 194859 gcggagtcggtgtcggcgccgct 194837
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 103 bits (52), Expect = 5e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 377 tacgtggagatcaccctggacgtgagggacgactcggtggcggtgcacagcgtgaagccg 436 ||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||| Sbjct: 34121 tacgtggagatcaccctcgacgtgcgcgacgactcggtggcggtgcacagcgtgaagccg 34062 Query: 437 gcgg 440 |||| Sbjct: 34061 gcgg 34058 Score = 58.0 bits (29), Expect = 3e-05 Identities = 70/83 (84%), Gaps = 3/83 (3%) Strand = Plus / Minus Query: 239 gtgccgcacagcgggcctctgggcgggaagcggtccgccatgcgcaagagcgcgcggttc 298 ||||||||||||||||| ||| || ||| |||||| ||| | ||||||||| ||||| Sbjct: 34271 gtgccgcacagcgggccactgagc---aagaggtccgggatgaggaagagcgcgaggttc 34215 Query: 299 gccgagtccgtgtcggcgccgct 321 || ||||| |||||||||||||| Sbjct: 34214 gcggagtcggtgtcggcgccgct 34192
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 103 bits (52), Expect = 5e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 377 tacgtggagatcaccctggacgtgagggacgactcggtggcggtgcacagcgtgaagccg 436 ||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||| Sbjct: 19089572 tacgtggagatcaccctcgacgtgcgcgacgactcggtggcggtgcacagcgtgaagccg 19089513 Query: 437 gcgg 440 |||| Sbjct: 19089512 gcgg 19089509 Score = 58.0 bits (29), Expect = 3e-05 Identities = 70/83 (84%), Gaps = 3/83 (3%) Strand = Plus / Minus Query: 239 gtgccgcacagcgggcctctgggcgggaagcggtccgccatgcgcaagagcgcgcggttc 298 ||||||||||||||||| ||| || ||| |||||| ||| | ||||||||| ||||| Sbjct: 19089722 gtgccgcacagcgggccactgagc---aagaggtccgggatgaggaagagcgcgaggttc 19089666 Query: 299 gccgagtccgtgtcggcgccgct 321 || ||||| |||||||||||||| Sbjct: 19089665 gcggagtcggtgtcggcgccgct 19089643
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 377 tacgtggagatcaccctggacgtgagggacgactcggtggcggtgcacagcgtgaagccg 436 ||||||||||||||||| |||||| | |||||||||||| ||| |||||||||||||||| Sbjct: 18930750 tacgtggagatcaccctcgacgtgcgcgacgactcggtgccggcgcacagcgtgaagccg 18930691 Query: 437 gcgg 440 |||| Sbjct: 18930690 gcgg 18930687 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 284 aagagcgcgcggttcgccgagtccgtgtcggcgccgct 321 ||||||||| ||||||| ||||| |||||||||||||| Sbjct: 18931030 aagagcgcgaggttcgcggagtcggtgtcggcgccgct 18930993
>ref|NM_124165.2| Arabidopsis thaliana RBOHD (RESPIRATORY BURST OXIDASE PROTEIN D) AT5G47910 (RBOHD) mRNA, complete cds Length = 3201 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 377 tacgtggagatcaccctggacgtgagggacgactcggtggc 417 |||||||||||||| || ||| | ||||||||||||||||| Sbjct: 368 tacgtggagatcacgctagacatcagggacgactcggtggc 408
>gb|AF424625.1|AF424625 Arabidopsis thaliana AT5g47910/MCA23_25 mRNA, complete cds Length = 2999 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 377 tacgtggagatcaccctggacgtgagggacgactcggtggc 417 |||||||||||||| || ||| | ||||||||||||||||| Sbjct: 368 tacgtggagatcacgctagacatcagggacgactcggtggc 408
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 334 cggggcgccgcgcggcgggggcggg 358 ||||||||||||||||||||||||| Sbjct: 287052 cggggcgccgcgcggcgggggcggg 287076
>gb|BT002651.1| Arabidopsis thaliana At5g47910/MCA23_25 gene, complete cds Length = 2766 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 377 tacgtggagatcaccctggacgtgagggacgactcggtggc 417 |||||||||||||| || ||| | ||||||||||||||||| Sbjct: 226 tacgtggagatcacgctagacatcagggacgactcggtggc 266
>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23 Length = 82503 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 377 tacgtggagatcaccctggacgtgagggacgactcggtggc 417 |||||||||||||| || ||| | ||||||||||||||||| Sbjct: 75043 tacgtggagatcacgctagacatcagggacgactcggtggc 75083
>gb|AF055357.1|AF055357 Arabidopsis thaliana respiratory burst oxidase protein D (RbohD) mRNA, complete cds Length = 3035 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 377 tacgtggagatcaccctggacgtgagggacgactcggtggc 417 |||||||||||||| || ||| | ||||||||||||||||| Sbjct: 357 tacgtggagatcacgctagacatcagggacgactcggtggc 397
>emb|AL670231.7| Mouse DNA sequence from clone RP23-329G7 on chromosome 4, complete sequence Length = 229957 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 52 gaaaaggaaaggaaaagatagag 74 ||||||||||||||||||||||| Sbjct: 175360 gaaaaggaaaggaaaagatagag 175338
>gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, complete sequence Length = 249008 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 gaaaaggaaaggaaaagataga 73 |||||||||||||||||||||| Sbjct: 192448 gaaaaggaaaggaaaagataga 192469
>gb|AC131116.3| Mus musculus BAC clone RP24-344M21 from chromosome 7, complete sequence Length = 190325 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 gaggagaaaaggaaaggaaaag 68 |||||||||||||||||||||| Sbjct: 138875 gaggagaaaaggaaaggaaaag 138896
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 326 gcgccgcacggggcgccgcgcggcgggggc 355 ||||||| |||||||||||| ||||||||| Sbjct: 145477 gcgccgcgcggggcgccgcggggcgggggc 145448
>dbj|AB074432.1| Cercopithecine herpesvirus 1 US1, US2, US3, US4, US5, US6, US7, US8, US8.5, US9, US10, US11, US12 genes, complete and partial cds Length = 14447 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 326 gcgccgcacggggcgccgcgcggcgggggc 355 ||||||| |||||||||||| ||||||||| Sbjct: 11374 gcgccgcgcggggcgccgcggggcgggggc 11345
>gb|AC072023.9| Homo sapiens 3 BAC RP11-3J2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 112405 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 48 aggagaaaaggaaaggaaaagataga 73 ||||||||| |||||||||||||||| Sbjct: 62666 aggagaaaaagaaaggaaaagataga 62691
>gb|AC122747.11| Mus musculus chromosome 9, clone RP23-217J11, complete sequence Length = 195755 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 agaaaaggaaaggaaaagatag 72 |||||||||||||||||||||| Sbjct: 153612 agaaaaggaaaggaaaagatag 153633
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 cgtgtcggcgccgctcacggc 327 ||||||||||||||||||||| Sbjct: 1075520 cgtgtcggcgccgctcacggc 1075540
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 ccgccatgcgcaagagcgcgc 293 ||||||||||||||||||||| Sbjct: 5664753 ccgccatgcgcaagagcgcgc 5664773
>gb|AC149237.1| Pan troglodytes chromosome X clone RP43-049A09 map human ortholog q28, complete sequence Length = 168371 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 aaaaggaaaggaaaagatagagagg 77 ||||||||||||||||| ||||||| Sbjct: 125414 aaaaggaaaggaaaagaaagagagg 125390
>gb|AC149235.1| Pan troglodytes chromosome X clone PTB-100E10 map human ortholog q28, complete sequence Length = 183411 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 aaaaggaaaggaaaagatagagagg 77 ||||||||||||||||| ||||||| Sbjct: 34524 aaaaggaaaggaaaagaaagagagg 34500
>emb|AL593853.11| Mouse DNA sequence from clone RP23-199A2 on chromosome 11 Contains the 5' end of a novel gene, the Sfrs1 gene for arginine/serine-rich splicing factor 1 (ASF/SF2), the Vezf1 gene for vascular endothelial zinc finger 1, a novel gene (2210416O15Rik), the gene for the likely ortholog of H. sapiens CUE domain containing 1 CUEDC1 (C330016O16Rik), the Mrps23 gene for mitochondrial ribosomal protein S23 and two CpG islands, complete sequence Length = 223276 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 agaaaaggaaaggaaaagatagaga 75 ||||||||||||||||||| ||||| Sbjct: 25201 agaaaaggaaaggaaaagaaagaga 25177
>gb|AC087487.14| Homo sapiens chromosome 15, clone RP11-698F12, complete sequence Length = 180232 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 ggagaaaaggaaaggaaaaga 69 ||||||||||||||||||||| Sbjct: 7982 ggagaaaaggaaaggaaaaga 8002
>gb|AC068867.9| Homo sapiens chromosome 15, clone RP11-702M1, complete sequence Length = 179455 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 ggagaaaaggaaaggaaaaga 69 ||||||||||||||||||||| Sbjct: 44795 ggagaaaaggaaaggaaaaga 44775
>gb|AC090815.3| Homo sapiens chromosome 15, clone RP11-1078O1, complete sequence Length = 180352 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 ggagaaaaggaaaggaaaaga 69 ||||||||||||||||||||| Sbjct: 120805 ggagaaaaggaaaggaaaaga 120825
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 cgccgcgcggcgggggcggga 359 ||||||||||||||||||||| Sbjct: 4194297 cgccgcgcggcgggggcggga 4194277
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 323 acggcgccgcacggggcgccgcgcggcgg 351 |||||| ||| |||||||||||||||||| Sbjct: 28003494 acggcgtcgcgcggggcgccgcgcggcgg 28003466
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 ggagaaaaggaaaggaaaaga 69 ||||||||||||||||||||| Sbjct: 24586584 ggagaaaaggaaaggaaaaga 24586604
>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1040D09 Length = 148102 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 ggagaaaaggaaaggaaaaga 69 ||||||||||||||||||||| Sbjct: 12547 ggagaaaaggaaaggaaaaga 12567
>gb|AC023881.6| Homo sapiens BAC clone RP11-108C2 from 2, complete sequence Length = 185802 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 agaaaaggaaaggaaaagata 71 ||||||||||||||||||||| Sbjct: 177051 agaaaaggaaaggaaaagata 177071
>gb|AC005731.2| Human X BAC RP11-159I8 (Roswell Park Cancer Institute Human BAC Library), Cosmid LL0XNC01-3C3 (LLNL X Chromosome Library), and BAC GS1-92B2 (Genome Systems Human BAC Library) complete sequence Length = 143944 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 aaaaggaaaggaaaagatagagagg 77 ||||||||||||||||| ||||||| Sbjct: 66260 aaaaggaaaggaaaagaaagagagg 66236
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 cgccgcgcggcgggggcggga 359 ||||||||||||||||||||| Sbjct: 39518 cgccgcgcggcgggggcggga 39498
>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0036B04 Length = 136159 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 cgccgcgcggcgggggcggga 359 ||||||||||||||||||||| Sbjct: 127556 cgccgcgcggcgggggcggga 127536
>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_A08 Length = 119304 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 323 acggcgccgcacggggcgccgcgcggcgg 351 |||||| ||| |||||||||||||||||| Sbjct: 47156 acggcgtcgcgcggggcgccgcgcggcgg 47128
>emb|AL845170.5| Mouse DNA sequence from clone RP23-282A22 on chromosome 2, complete sequence Length = 183985 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 ggagaaaaggaaaggaaaaga 69 ||||||||||||||||||||| Sbjct: 101304 ggagaaaaggaaaggaaaaga 101284
>gb|AC154193.2| Mus musculus BAC clone RP24-398A6 from chromosome 14, complete sequence Length = 161686 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 aggagaaaaggaaaggaaaagata 71 |||||||||||||| ||||||||| Sbjct: 11201 aggagaaaaggaaaagaaaagata 11224
>gb|AC152821.5| Mus musculus BAC clone RP24-366H21 from chromosome y, complete sequence Length = 179613 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 agaaaaggaaaggaaaagatagag 74 ||||||||||||||| |||||||| Sbjct: 114601 agaaaaggaaaggaagagatagag 114578
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 gcgccgcgcggcgggggcgg 357 |||||||||||||||||||| Sbjct: 3778453 gcgccgcgcggcgggggcgg 3778472
>gb|AC148880.2| Chlamydomonas reinhardtii clone cr-40F11, complete sequence Length = 56458 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gtgaagccggcggcgggcgg 447 |||||||||||||||||||| Sbjct: 40921 gtgaagccggcggcgggcgg 40902
>gb|AC114342.12| Mus musculus chromosome 5, clone RP24-143H14, complete sequence Length = 171509 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gagaaaaggaaaggaaaaga 69 |||||||||||||||||||| Sbjct: 38386 gagaaaaggaaaggaaaaga 38405
>gb|AC124212.2| Mus musculus chromosome X clone CT7-532E7 map qA7.1, complete sequence Length = 109783 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aaaggaaaggaaaagataga 73 |||||||||||||||||||| Sbjct: 9979 aaaggaaaggaaaagataga 9960
>gb|AC150661.6| Mus musculus BAC clone RP23-6A9 from chromosome 12, complete sequence Length = 234903 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 gaaaaggaaaggaaaagatagaga 75 |||||||||||||||| ||||||| Sbjct: 28643 gaaaaggaaaggaaaaaatagaga 28666
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cggggcgccgcgcggcgggggcgg 357 ||||||| |||||||||||||||| Sbjct: 5519896 cggggcggcgcgcggcgggggcgg 5519919
>gb|AC161537.7| Mus musculus chromosome 15, clone RP23-471J11, complete sequence Length = 188471 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cctctcctcctatcctgcta 146 |||||||||||||||||||| Sbjct: 168137 cctctcctcctatcctgcta 168118
>gb|AC118639.12| Mus musculus chromosome 15, clone RP24-112I4, complete sequence Length = 166053 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cctctcctcctatcctgcta 146 |||||||||||||||||||| Sbjct: 134021 cctctcctcctatcctgcta 134040
>gb|AC135808.4| Mus musculus BAC clone RP24-316N5 from chromosome Y, complete sequence Length = 149744 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 agaaaaggaaaggaaaagatagag 74 ||||||||||||||| |||||||| Sbjct: 2787 agaaaaggaaaggaagagatagag 2810
>gb|AC009135.12| Homo sapiens chromosome 16 clone RP11-509E10, complete sequence Length = 221640 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 gaggagaaaaggaaaggaaa 66 |||||||||||||||||||| Sbjct: 18538 gaggagaaaaggaaaggaaa 18519
>gb|AC125543.3| Mus musculus BAC clone RP23-360H5 from chromosome 12, complete sequence Length = 184081 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 gaaaaggaaaggaaaagatagaga 75 |||||||||||||||| ||||||| Sbjct: 118697 gaaaaggaaaggaaaaaatagaga 118720
>gb|AC112523.5| Mus musculus BAC clone RP23-418K6 from chromosome 16, complete sequence Length = 186848 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 aaaaggaaaggaaaagatagagag 76 ||||||||||||||||| |||||| Sbjct: 71425 aaaaggaaaggaaaagaaagagag 71402
>gb|AC146173.2| Pan troglodytes BAC clone RP43-36F20 from 7, complete sequence Length = 197121 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 gaaaaggaaaggaaaagatagaga 75 |||||||||||||||||| ||||| Sbjct: 127635 gaaaaggaaaggaaaagaaagaga 127612
>gb|AC073886.4| Homo sapiens BAC clone RP11-101N13 from 7, complete sequence Length = 112568 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aaaggaaaggaaaagataga 73 |||||||||||||||||||| Sbjct: 33590 aaaggaaaggaaaagataga 33571
>emb|Z93403.1|HS308O1 Human DNA sequence from clone RP1-308O1 on chromosome Xp11.3-11.4 Contains part of a novel gene, complete sequence Length = 166715 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 aggaaaggaaaagatagaga 75 |||||||||||||||||||| Sbjct: 148469 aggaaaggaaaagatagaga 148450
>emb|AL450487.17| Human DNA sequence from clone RP11-314A15 on chromosome Xq12-13.3 Contains a eukaryotic translation termination factor 1 (ETF1) pseudogene, a cyclin fold protein 1 (CFP1) pseudogene and a CpG island, complete sequence Length = 159093 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 aaaggaaaggaaaagataga 73 |||||||||||||||||||| Sbjct: 147431 aaaggaaaggaaaagataga 147450
>emb|AL139405.11| Human DNA sequence from clone RP11-393E10 on chromosome 10 Contains the 5' end of a variant of the gene for a novel protein (FLJ10210) and the 3' end of the gene for a novel protein (MGC11034), complete sequence Length = 179829 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 aaaggaaaggaaaagatagagagg 77 |||||||||||||||| ||||||| Sbjct: 70761 aaaggaaaggaaaagaaagagagg 70784
>emb|AL136124.10| Human DNA sequence from clone RP4-792D7 on chromosome 1q42.2-43 Contains the 5' end of the TARBP1 gene for TAR (HIV) RNA binding protein 1 and a CpG island, complete sequence Length = 104632 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gagaaaaggaaaggaaaaga 69 |||||||||||||||||||| Sbjct: 77563 gagaaaaggaaaggaaaaga 77544
>gb|AC163089.3| Mus musculus chromosome 5, clone RP23-346P15, complete sequence Length = 197826 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gagaaaaggaaaggaaaaga 69 |||||||||||||||||||| Sbjct: 120021 gagaaaaggaaaggaaaaga 120040
>emb|X73282.1|CPGPD Claviceps purpurea GPD 1 gene for glyceraldehyde-3-phosphate dehydrogenase Length = 3495 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 gaggagaaaaggaaaggaaaagat 70 ||||||||||||||||| |||||| Sbjct: 1563 gaggagaaaaggaaagggaaagat 1540
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 gcgccgcgcggcgggggcgg 357 |||||||||||||||||||| Sbjct: 318557 gcgccgcgcggcgggggcgg 318576
>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14 Length = 308050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 gcgccgcgcggcgggggcgg 357 |||||||||||||||||||| Sbjct: 296860 gcgccgcgcggcgggggcgg 296879
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 ggggcgccgcgcggcgggggcggg 358 |||||| ||||||||||||||||| Sbjct: 247260 ggggcggcgcgcggcgggggcggg 247283
>emb|AL645599.14| Mouse DNA sequence from clone RP23-285F4 on chromosome 11 Contains the 5' end of a novel gene, a ribosomal protein L7A (Rpl7a) pseudogene and a CpG island, complete sequence Length = 127405 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 gaggagaaaaggaaaggaaa 66 |||||||||||||||||||| Sbjct: 105107 gaggagaaaaggaaaggaaa 105088
>emb|BX530030.12| Zebrafish DNA sequence from clone DKEY-38K9 in linkage group 21, complete sequence Length = 180154 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ggagaaaaggaaaggaaaag 68 |||||||||||||||||||| Sbjct: 71574 ggagaaaaggaaaggaaaag 71593
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cggggcgccgcgcggcgggggcgg 357 ||||||| |||||||||||||||| Sbjct: 63427 cggggcggcgcgcggcgggggcgg 63450
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 cgccatgcgcaagagcgcgc 293 |||||||||||||||||||| Sbjct: 6315405 cgccatgcgcaagagcgcgc 6315424
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 gaccggctgccggcgcggccatgc 182 ||||||| |||||||||||||||| Sbjct: 2052040 gaccggcagccggcgcggccatgc 2052017
>gb|AC023716.4| Drosophila melanogaster X BAC RP98-45E21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169124 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 aaaaggaaaggaaaagatagagag 76 ||||||||||||||||| |||||| Sbjct: 137996 aaaaggaaaggaaaagaaagagag 137973
>gb|AC024678.10| Homo sapiens chromosome 8, clone RP11-564K10, complete sequence Length = 170788 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gagaaaaggaaaggaaaaga 69 |||||||||||||||||||| Sbjct: 108793 gagaaaaggaaaggaaaaga 108774
>gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1345H02, from chromosome 3, complete sequence Length = 145290 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cggggcgccgcgcggcgggggcgg 357 ||||||| |||||||||||||||| Sbjct: 116490 cggggcggcgcgcggcgggggcgg 116513
>gb|AC183287.1| Pan troglodytes chromosome X clone CH251-59K17 map human ortholog p11.4, complete sequence Length = 225601 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aggaaaggaaaagatagaga 75 |||||||||||||||||||| Sbjct: 122644 aggaaaggaaaagatagaga 122663
>gb|AC009136.6| Homo sapiens chromosome 16 clone RP11-518J6, complete sequence Length = 182105 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cggggcgccgcgcggcgggggcgg 357 |||||||| ||||||||||||||| Sbjct: 9273 cggggcgcggcgcggcgggggcgg 9296
>gb|AC022150.6| Homo sapiens chromosome 19 clone CTD-3099C6, complete sequence Length = 228156 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aaaggaaaggaaaagataga 73 |||||||||||||||||||| Sbjct: 177965 aaaggaaaggaaaagataga 177946
>gb|AC026795.6| Homo sapiens chromosome 5 clone CTD-2287L22, complete sequence Length = 156277 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 aaaggaaaggaaaagataga 73 |||||||||||||||||||| Sbjct: 73786 aaaggaaaggaaaagataga 73805
>dbj|AB168181.1| Macaca fascicularis testis cDNA clone: QtsA-10359, similar to human EH-domain containing 2 (EHD2), mRNA, RefSeq: NM_014601.2 Length = 3560 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 aaaggaaaggaaaagatagagagg 77 |||||||||||||||| ||||||| Sbjct: 2680 aaaggaaaggaaaagagagagagg 2657
>gb|AC027338.5| Homo sapiens chromosome 5 clone CTD-2227C6, complete sequence Length = 117813 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 aaaggaaaggaaaagataga 73 |||||||||||||||||||| Sbjct: 62424 aaaggaaaggaaaagataga 62443
>gb|AC008597.8| Homo sapiens chromosome 5 clone CTB-102L23, complete sequence Length = 69479 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 aaaggaaaggaaaagataga 73 |||||||||||||||||||| Sbjct: 55024 aaaggaaaggaaaagataga 55043
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 cgcacggggcgccgcgcggc 349 |||||||||||||||||||| Sbjct: 84041 cgcacggggcgccgcgcggc 84022
>gb|AC148664.1| Macaca mulatta Major Histocompatibility Complex BAC MMU021E24, complete sequence Length = 189424 Score = 40.1 bits (20), Expect = 6.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 50 gagaaaaggaaaggaaaagatagagagg 77 |||||||||||||| ||||||||||||| Sbjct: 120898 gagaaaaggaaagg-aaagatagagagg 120924
>gb|AC156616.5| Mus musculus chromosome 3, clone RP24-158L2, complete sequence Length = 127112 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 aaaaggaaaggaaaagatag 72 |||||||||||||||||||| Sbjct: 89285 aaaaggaaaggaaaagatag 89304
>gb|AC024564.4|AC024564 Homo sapiens chromosome 5 clone CTC-532M5, complete sequence Length = 176621 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aaaggaaaggaaaagataga 73 |||||||||||||||||||| Sbjct: 31401 aaaggaaaggaaaagataga 31382
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gagaaaaggaaaggaaaaga 69 |||||||||||||||||||| Sbjct: 1217396 gagaaaaggaaaggaaaaga 1217377
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 aaaggaaaggaaaagatagagagg 77 |||||||||||||||| ||||||| Sbjct: 52619 aaaggaaaggaaaagaaagagagg 52642
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cggggcgccgcgcggcgggggcgg 357 ||||||| |||||||||||||||| Sbjct: 5519111 cggggcggcgcgcggcgggggcgg 5519134
>gb|AC023829.6| Homo sapiens chromosome 16 clone RP11-578P21, complete sequence Length = 161477 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 gaggagaaaaggaaaggaaa 66 |||||||||||||||||||| Sbjct: 85146 gaggagaaaaggaaaggaaa 85127
>gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome 14, complete sequence Length = 202303 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 aggagaaaaggaaaggaaaagata 71 |||||||||||||| ||||||||| Sbjct: 8573 aggagaaaaggaaaagaaaagata 8550
>gb|AC146077.4| Pan troglodytes BAC clone RP43-45A15 from chromosome 7, complete sequence Length = 188174 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 aaaggaaaggaaaagataga 73 |||||||||||||||||||| Sbjct: 66113 aaaggaaaggaaaagataga 66132
>gb|AC106736.4| Homo sapiens chromosome 16 clone CTD-2520I13, complete sequence Length = 152212 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 cggggcgccgcgcggcgggggcgg 357 |||||||| ||||||||||||||| Sbjct: 41338 cggggcgcggcgcggcgggggcgg 41361
>gb|AC158234.2| Mus musculus BAC clone RP23-149C23 from chromosome 16, complete sequence Length = 227632 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 aaaaggaaaggaaaagatagagag 76 ||||||||||||||||| |||||| Sbjct: 115425 aaaaggaaaggaaaagaaagagag 115448
>gb|AC159235.2| Mus musculus BAC clone RP24-432L4 from chromosome ul, complete sequence Length = 133340 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 agaaaaggaaaggaaaagatagag 74 ||||||||||||||| |||||||| Sbjct: 77785 agaaaaggaaaggaagagatagag 77762
>gb|AC129951.9| Mus musculus chromosome 15, clone RP23-127B14, complete sequence Length = 211987 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gaaaggaaaagatagagagg 77 |||||||||||||||||||| Sbjct: 31519 gaaaggaaaagatagagagg 31500
>gb|AC006508.2|AC006508 Mus musculus Yp BAC GSMB-187H15 (Genome Systems Mouse BAC Library) complete sequence Length = 185286 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gagaaaaggaaaggaaaaga 69 |||||||||||||||||||| Sbjct: 28388 gagaaaaggaaaggaaaaga 28407
>gb|AC102178.21| Mus musculus chromosome 7, clone RP24-70C24, complete sequence Length = 190370 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gagaaaaggaaaggaaaaga 69 |||||||||||||||||||| Sbjct: 94752 gagaaaaggaaaggaaaaga 94733
>gb|AC138612.1| Homo sapiens BAC clone CTD-2293E22 from 2, complete sequence Length = 158057 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 aaaggaaaggaaaagataga 73 |||||||||||||||||||| Sbjct: 81020 aaaggaaaggaaaagataga 81039
>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1203H11 Length = 156561 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gagaaaaggaaaggaaaaga 69 |||||||||||||||||||| Sbjct: 130633 gagaaaaggaaaggaaaaga 130614
>dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0073J19 Length = 165174 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gagaaaaggaaaggaaaaga 69 |||||||||||||||||||| Sbjct: 46703 gagaaaaggaaaggaaaaga 46684
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cggcgccgctcacggcgccg 331 |||||||||||||||||||| Sbjct: 692896 cggcgccgctcacggcgccg 692877
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1026C12 Length = 170240 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 aaaggaaaggaaaagatagagagg 77 |||||||||||||||| ||||||| Sbjct: 51918 aaaggaaaggaaaagaaagagagg 51941
>emb|BX571879.8| Zebrafish DNA sequence from clone DKEY-238C7 in linkage group 18, complete sequence Length = 252198 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tctgtctgtccaaccatcct 129 |||||||||||||||||||| Sbjct: 106520 tctgtctgtccaaccatcct 106501
>emb|AL928668.7| Zebrafish DNA sequence from clone CH211-208M1, complete sequence Length = 241975 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ggagaaaaggaaaggaaaag 68 |||||||||||||||||||| Sbjct: 138094 ggagaaaaggaaaggaaaag 138075
>dbj|AP006617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091F23 Length = 147699 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gagaaaaggaaaggaaaaga 69 |||||||||||||||||||| Sbjct: 84475 gagaaaaggaaaggaaaaga 84456
>gb|AC147616.3| Mus musculus BAC clone RP23-433L22 from 8, complete sequence Length = 182152 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gagaaaaggaaaggaaaaga 69 |||||||||||||||||||| Sbjct: 58783 gagaaaaggaaaggaaaaga 58764
>gb|AC145393.4| Mus musculus BAC clone RP24-208N6 from Y, complete sequence Length = 167299 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gagaaaaggaaaggaaaaga 69 |||||||||||||||||||| Sbjct: 65800 gagaaaaggaaaggaaaaga 65781
>emb|CT573208.8| Zebrafish DNA sequence from clone CH73-52H17 in linkage group 13, complete sequence Length = 44002 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 aggagaaaaggaaaggaaaa 67 |||||||||||||||||||| Sbjct: 43961 aggagaaaaggaaaggaaaa 43980
>gb|AE003450.4| Drosophila melanogaster chromosome X, section 34 of 74 of the complete sequence Length = 232514 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 aaaaggaaaggaaaagatagagag 76 ||||||||||||||||| |||||| Sbjct: 62857 aaaaggaaaggaaaagaaagagag 62834
>emb|X56668.1|HSCALRT1 Human DNA for calretinin exon 1 Length = 5618 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 cggggcgccgcgcggcgggggcgg 357 |||||||| ||||||||||||||| Sbjct: 4461 cggggcgcggcgcggcgggggcgg 4438
>gb|AC134462.5| Mus musculus BAC clone RP23-391L12 from chromosome 12, complete sequence Length = 197870 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 gaaaaggaaaggaaaagatagaga 75 |||||||||||||||| ||||||| Sbjct: 99777 gaaaaggaaaggaaaaaatagaga 99754
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ggcgccgcgcggcgggggcg 356 |||||||||||||||||||| Sbjct: 913373 ggcgccgcgcggcgggggcg 913392
>emb|AL935060.17| Mouse DNA sequence from clone RP24-151H6 on chromosome 2, complete sequence Length = 212007 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gagaaaaggaaaggaaaaga 69 |||||||||||||||||||| Sbjct: 73893 gagaaaaggaaaggaaaaga 73912
>emb|X97257.1|PRVULGNS Suid herpesvirus 1 strain Kaplan UL[5,6,7,8,8.5,9,10,11,12,13] genes Length = 11059 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 cgcacggggcgccgcgcggc 349 |||||||||||||||||||| Sbjct: 5691 cgcacggggcgccgcgcggc 5672
>gb|AC164120.2| Mus musculus BAC clone RP24-289J17 from chromosome 14, complete sequence Length = 147050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 gaggagaaaaggaaaggaaa 66 |||||||||||||||||||| Sbjct: 32345 gaggagaaaaggaaaggaaa 32326
>gb|AC149052.3| Mus musculus BAC clone RP24-548O1 from 7, complete sequence Length = 209182 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 aggagaaaaggaaaggaaaagata 71 |||||||||| ||||||||||||| Sbjct: 43611 aggagaaaagcaaaggaaaagata 43634
>gb|AC149282.2| Mus musculus BAC clone RP23-236D19 from 7, complete sequence Length = 221553 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 aggagaaaaggaaaggaaaagata 71 |||||||||| ||||||||||||| Sbjct: 7906 aggagaaaagcaaaggaaaagata 7883
>emb|AL929534.12| Mouse DNA sequence from clone RP23-275L13 on chromosome 2, complete sequence Length = 190466 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 gaggagaaaaggaaaggaaa 66 |||||||||||||||||||| Sbjct: 116841 gaggagaaaaggaaaggaaa 116860
>gb|U57682.1|RCU57682 Rhodobacter capsulatus cosmids 143-147, complete sequence Length = 86896 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 cggggcgccgcgcggcgggg 353 |||||||||||||||||||| Sbjct: 80974 cggggcgccgcgcggcgggg 80993
>emb|AL671874.17| Mouse DNA sequence from clone RP23-169I24 on chromosome X, complete sequence Length = 187669 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aaaggaaaggaaaagataga 73 |||||||||||||||||||| Sbjct: 128461 aaaggaaaggaaaagataga 128442
>emb|AL805921.7| Mouse DNA sequence from clone RP23-293N9 on chromosome 4, complete sequence Length = 162090 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 gaggagaaaaggaaaggaaa 66 |||||||||||||||||||| Sbjct: 113874 gaggagaaaaggaaaggaaa 113855
>gb|AC166358.5| Mus musculus BAC clone RP23-338N2 from chromosome 12, complete sequence Length = 226310 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 gaaaaggaaaggaaaagatagaga 75 |||||||||||||||| ||||||| Sbjct: 198181 gaaaaggaaaggaaaaaatagaga 198158
>emb|AL365334.13| Mouse DNA sequence from clone RP23-392F1 on chromosome 1, complete sequence Length = 173053 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ggagaaaaggaaaggaaaag 68 |||||||||||||||||||| Sbjct: 124501 ggagaaaaggaaaggaaaag 124520 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,205,779 Number of Sequences: 3902068 Number of extensions: 3205779 Number of successful extensions: 95177 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 93411 Number of HSP's gapped (non-prelim): 1764 length of query: 447 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 425 effective length of database: 17,147,199,772 effective search space: 7287559903100 effective search space used: 7287559903100 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
