Clone Name | bastl27c04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ZDH24_RAT (Q2TGI5) Probable palmitoyltransferase ZDHHC24 (EC 2.3... | 29 | 5.5 | 2 | ZDH24_MOUSE (Q6IR37) Probable palmitoyltransferase ZDHHC24 (EC 2... | 29 | 5.5 | 3 | CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic sub... | 28 | 9.4 | 4 | GAL7_SALTY (P22714) Galactose-1-phosphate uridylyltransferase (E... | 28 | 9.4 |
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>ZDH24_RAT (Q2TGI5) Probable palmitoyltransferase ZDHHC24 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 24) (DHHC-24) (Membrane-associated zinc finger protein DHHC25) Length = 284 Score = 29.3 bits (64), Expect = 5.5 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Frame = -1 Query: 192 PRLTAVPHPSPRLLSSAFLLIPWLPVVFSKANLPQSSL-----LCPSSAILGACNL 40 P L+A+ L + A LL+PWL ++ K +L Q +L C + A+L L Sbjct: 159 PALSALLQAHSALYTVALLLLPWLMLLTGKVSLAQFALAFVVDTCVAGALLCGAGL 214
>ZDH24_MOUSE (Q6IR37) Probable palmitoyltransferase ZDHHC24 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 24) (DHHC-24) Length = 284 Score = 29.3 bits (64), Expect = 5.5 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Frame = -1 Query: 192 PRLTAVPHPSPRLLSSAFLLIPWLPVVFSKANLPQSSL-----LCPSSAILGACNL 40 P L+A+ L + A LL+PWL ++ K +L Q +L C + A+L L Sbjct: 159 PALSALLQAHSALYTVALLLLPWLMLLTGKVSLAQFALAFVVDTCVAGALLCGAGL 214
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 28.5 bits (62), Expect = 9.4 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 6/46 (13%) Frame = +2 Query: 2 KDVKERQSKASSERLHAPRMAEEG------HNNDDWGKLALEKTTG 121 KD + ++ K +S+++HA EEG NN + +L LEK G Sbjct: 686 KDNQRKKPKETSKQIHALEHIEEGLQVTNAENNSETAQLKLEKKFG 731
>GAL7_SALTY (P22714) Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12)| (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) Length = 348 Score = 28.5 bits (62), Expect = 9.4 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = -1 Query: 126 WLPVVFSKANLPQSSLLCPSSAILGACNLSDDALDCLSL 10 WL VV A P +LL P + +L +LSD+ D L+L Sbjct: 219 WLAVVPYWAAWPFETLLLPKTHVLRITDLSDEQRDSLAL 257 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,497,768 Number of Sequences: 219361 Number of extensions: 1096932 Number of successful extensions: 3089 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3032 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3088 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)