Clone Information

BLAST Search Result

Clone Name	bastl27c03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PER1_MOUSE (O35973) Period circadian protein 1 (Circadian pacema...	33	0.17
2	HIRA_DROME (O17468) HIRA protein homolog (dHIRA)	33	0.17
3	ALL2_ASPFU (P79017) Major allergen Asp f 2 precursor (Asp f II)	33	0.23
4	RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats prote...	32	0.50
5	AXN2_MOUSE (O88566) Axin-2 (Axis inhibition protein 2) (Conducti...	31	0.66
6	CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel ...	31	0.66
7	AXN2_RAT (O70240) Axin-2 (Axis inhibition protein 2) (Conductin)...	31	0.66
8	RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats pro...	31	0.86
9	RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats pro...	31	0.86
10	EF1G_TRYCR (P34715) Elongation factor 1-gamma (EF-1-gamma) (eEF-...	31	0.86
11	SOX4_HUMAN (Q06945) Transcription factor SOX-4	30	1.1
12	AXN2_HUMAN (Q9Y2T1) Axin-2 (Axis inhibition protein 2) (Conducti...	30	1.1
13	PER1_HUMAN (O15534) Period circadian protein 1 (Circadian pacema...	30	1.5
14	VLPC_MYCHR (P29230) Variant surface antigen C precursor (VLPC pr...	30	1.9
15	ARI1A_HUMAN (O14497) AT-rich interactive domain-containing prote...	30	1.9
16	ACM1_DROME (P16395) Muscarinic acetylcholine receptor DM1	30	1.9
17	BASP_MOUSE (Q91XV3) Brain acid soluble protein 1 (BASP1 protein)...	29	2.5
18	CUL4B_HUMAN (Q13620) Cullin-4B (CUL-4B)	29	2.5
19	HTPG_BRAJA (Q89CK8) Chaperone protein htpG (Heat shock protein h...	29	2.5
20	ZCH10_RAT (Q5EB97) Zinc finger CCHC domain-containing protein 10	29	2.5
21	NFE2_HUMAN (Q16621) Transcription factor NF-E2 45 kDa subunit (N...	29	3.3
22	K1267_HUMAN (Q7Z3B3) Protein KIAA1267	29	3.3
23	IE18_PRVIF (P11675) Immediate-early protein IE180	29	3.3
24	TAOK1_RAT (O88664) Serine/threonine-protein kinase TAO1 (EC 2.7....	28	4.3
25	NFL_COTJA (Q02916) Neurofilament triplet L protein (Neurofilamen...	28	4.3
26	BASP_RAT (Q05175) Brain acid soluble protein 1 (BASP1 protein) (...	28	4.3
27	XPC_MOUSE (P51612) DNA-repair protein complementing XP-C cells h...	28	4.3
28	VE2_HPV47 (P22420) Regulatory protein E2	28	4.3
29	SRBP2_CRIGR (Q60429) Sterol regulatory element-binding protein 2...	28	4.3
30	ETV7_HUMAN (Q9Y603) Transcription factor ETV7 (Transcription fac...	28	5.6
31	SOX4_MOUSE (Q06831) Transcription factor SOX-4	28	5.6
32	SKI_HUMAN (P12755) Ski oncogene (C-ski)	28	5.6
33	PRA1_CANAL (P87020) pH-regulated antigen PRA1 precursor (58 kDa ...	28	5.6
34	GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outg...	28	5.6
35	ZN326_MOUSE (O88291) Zinc finger protein 326 (Zinc finger protei...	28	7.3
36	GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outg...	28	7.3
37	CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 ...	28	7.3
38	KCNAB_DROME (P17970) Potassium voltage-gated channel protein Shab	28	7.3
39	MARCS_CHICK (P16527) Myristoylated alanine-rich C-kinase substra...	28	7.3
40	K1949_PIG (Q767M0) Protein KIAA1949 homolog	28	7.3
41	MDM2_XENLA (P56273) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-...	28	7.3
42	CHD9_HUMAN (Q3L8U1) Chromodomain-helicase-DNA-binding protein 9 ...	27	9.5
43	RL2_ASTYP (Q50264) 50S ribosomal protein L2	27	9.5
44	MARCS_BOVIN (P12624) Myristoylated alanine-rich C-kinase substra...	27	9.5
45	BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein sh...	27	9.5
46	DNB2_ADE04 (P06500) Early E2A DNA-binding protein	27	9.5
47	ACH3_DROME (P04755) Acetylcholine receptor protein, beta-like su...	27	9.5
48	ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing prote...	27	9.5
49	RBM10_HUMAN (P98175) RNA-binding protein 10 (RNA-binding motif p...	27	9.5
50	PAN1_YEAST (P32521) Protein PAN1	27	9.5

>PER1_MOUSE (O35973) Period circadian protein 1 (Circadian pacemaker protein|
            Rigui) (mPER) (M-Rigui)
          Length = 1291

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
 Frame = -3

Query: 301  GGEQDQGDGCGP-----EAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMD 140
            GGE   G GCG      + GEEA   + + GS   +S + A EE E    +SSP  P +
Sbjct: 1234 GGE---GGGCGVGGGGGDGGEEAQTQIGAKGS---SSQDSAMEEEEQGGGSSSPALPAE 1286

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>HIRA_DROME (O17468) HIRA protein homolog (dHIRA)|
          Length = 1047

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 22/65 (33%), Positives = 31/65 (47%)
 Frame = -3

Query: 250  AAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPPCHTHQTHARCLLFPILSLS 71
            A+ SLSSSGS++ TS   +       ++ S P      +P   T  +   C+   ILS S
Sbjct: 943  ASSSLSSSGSSSSTSGSGSSSSSSSTSSLSVPQPAPSLSPEIQTLDSPTVCIDDEILSAS 1002

Query: 70   HSL*P 56
             SL P
Sbjct: 1003 SSLPP 1007

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>ALL2_ASPFU (P79017) Major allergen Asp f 2 precursor (Asp f II)|
          Length = 310

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = -3

Query: 283 GDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPPCHTHQ 113
           G+  GP+ G +   S S+  S + +S       G       SP   +D    CHTH+
Sbjct: 248 GESHGPDQGHDTG-SASAPASTSTSSSSSGSGSGATTTPTDSPSATIDVPSNCHTHE 303

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>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-related protein)
          Length = 1559

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 25/83 (30%), Positives = 32/83 (38%)
 Frame = -3

Query: 256  EEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPPCHTHQTHARCLLFPILS 77
            E AA   SSS    R S       G MR +   P T + A PP     T A      + +
Sbjct: 1195 ERAAQKASSSAHEGRLSDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPA------LRT 1248

Query: 76   LSHSL*PHAMATRAGDAPHRKPI 8
            LS    PH M+    + P   P+
Sbjct: 1249 LSEYARPHVMSPTNRNHPFYMPL 1271

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>AXN2_MOUSE (O88566) Axin-2 (Axis inhibition protein 2) (Conductin) (Axin-like|
           protein) (Axil)
          Length = 840

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -3

Query: 298 GEQDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLT 149
           GE+ +   C P  G+  +       SNAR  +ED   E E RA+  SPLT
Sbjct: 28  GEEGETPPCQPSVGKVQSTKPMPVSSNAR-RNEDGLGEPEGRASPDSPLT 76

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>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2505

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 20/69 (28%), Positives = 25/69 (36%)
 Frame = -3

Query: 301  GGEQDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPPCH 122
            G + D+ DG G   GEEA      +    R             A   SP TP  + P C 
Sbjct: 2411 GSDYDEADGPGSGGGEEAMAGAYDAPPPVR--------HASSGATGRSPRTPRASGPACA 2462

Query: 121  THQTHARCL 95
            +   H R L
Sbjct: 2463 SPSRHGRRL 2471

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>AXN2_RAT (O70240) Axin-2 (Axis inhibition protein 2) (Conductin) (Axin-like|
           protein) (Axil)
          Length = 838

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -3

Query: 298 GEQDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLT 149
           GE+ +   C P  G+  +       SNAR  +ED   E E RA+  SPLT
Sbjct: 28  GEEGETPPCQPSVGKVQSTKPMPVSSNAR-RNEDGLGEPEGRASPDSPLT 76

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>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-2)
          Length = 1558

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 25/86 (29%), Positives = 32/86 (37%)
 Frame = -3

Query: 265  EAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPPCHTHQTHARCLLFP 86
            E   E A   SSS    R S       G MR +   P T + A PP     T A      
Sbjct: 1191 EREAERAAKASSSAHEGRLSDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPA------ 1244

Query: 85   ILSLSHSL*PHAMATRAGDAPHRKPI 8
            + +LS    PH M+    + P   P+
Sbjct: 1245 LRTLSEYARPHVMSPTNRNHPFYMPL 1270

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>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-like protein) (Atrophin-1-related protein)
          Length = 1566

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 25/86 (29%), Positives = 32/86 (37%)
 Frame = -3

Query: 265  EAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPPCHTHQTHARCLLFP 86
            E   E A   SSS    R S       G MR +   P T + A PP     T A      
Sbjct: 1199 EREAERAAKASSSAHEGRLSDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPA------ 1252

Query: 85   ILSLSHSL*PHAMATRAGDAPHRKPI 8
            + +LS    PH M+    + P   P+
Sbjct: 1253 LRTLSEYARPHVMSPTNRNHPFYMPL 1278

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>EF1G_TRYCR (P34715) Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)|
          Length = 411

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 20/60 (33%), Positives = 25/60 (41%)
 Frame = -3

Query: 307 RSGGEQDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPP 128
           R GG + QG GC     EEA          A  + + A+EE E       P  P+D  PP
Sbjct: 214 REGGAKGQGRGCARPGREEA--------ERAAAAADGAEEEDEAPREKKKP-NPLDELPP 264

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>SOX4_HUMAN (Q06945) Transcription factor SOX-4|
          Length = 474

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = -3

Query: 292 QDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLT-PMDAAPPCHTH 116
           +++G GC P+A   +  S ++S   A  S  D +    +RAA+ +P + P  A+    +H
Sbjct: 326 EEEGAGCSPDAPSLSGRSSAASSPAAGRSPADHRGYASLRAASPAPSSAPSHASSSASSH 385

Query: 115 QT 110
            +
Sbjct: 386 SS 387

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>AXN2_HUMAN (Q9Y2T1) Axin-2 (Axis inhibition protein 2) (Conductin) (Axin-like|
           protein) (Axil)
          Length = 843

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -3

Query: 298 GEQDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLT 149
           GE+ +   C P  G+       S  SN R + ED   E E RA+  SPLT
Sbjct: 28  GEEGETPPCQPGVGKGQVTKPMSVSSNTRRN-EDGLGEPEGRASPDSPLT 76

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>PER1_HUMAN (O15534) Period circadian protein 1 (Circadian pacemaker protein|
            Rigui) (hPER)
          Length = 1290

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = -3

Query: 304  SGGEQDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTP 146
            SGG   +G+GC     EEA       G+ A +S + A EE E   ++SSP  P
Sbjct: 1241 SGGGSGEGEGC-----EEA-----QGGAKASSSQDLAMEEEEEGRSSSSPALP 1283

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>VLPC_MYCHR (P29230) Variant surface antigen C precursor (VLPC prolipoprotein)|
          Length = 160

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/59 (27%), Positives = 24/59 (40%)
 Frame = -3

Query: 304 SGGEQDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPP 128
           SGG+     G G   GE+   +  S  S ++ +   + E G   A   SP +    A P
Sbjct: 67  SGGQSGTTSGSGTTTGEQTETAPKSPESGSQEATPKSPESGSQEATPKSPESGSQEAAP 125

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>ARI1A_HUMAN (O14497) AT-rich interactive domain-containing protein 1A (ARID|
           domain-containing protein 1A) (SWI/SNF-related,
           matrix-associated, actin-dependent regulator of
           chromatin subfamily F member 1) (SWI-SNF complex protein
           p270) (B120) (SWI-like pr
          Length = 2285

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 14/69 (20%)
 Frame = -3

Query: 304 SGGEQDQGDGCGP---------EAGEEAAVSLSSSGSNARTSHE-----DAKEEGEMRAA 167
           SGG QD G G GP          A   AA + +S G+  R+ H       +   G+  A 
Sbjct: 317 SGGPQDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLAR 376

Query: 166 ASSPLTPMD 140
              P +PMD
Sbjct: 377 TPQPSSPMD 385

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>ACM1_DROME (P16395) Muscarinic acetylcholine receptor DM1|
          Length = 805

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/44 (43%), Positives = 24/44 (54%)
 Frame = -3

Query: 283 GDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPL 152
           G G GP AG  A+ SLS  G  A  S +   E+G    AA++PL
Sbjct: 589 GGGGGPGAGAAASASLSMQGDCA-PSIKMIHEDGPTTTAAAAPL 631

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>BASP_MOUSE (Q91XV3) Brain acid soluble protein 1 (BASP1 protein) (Neuronal|
           axonal membrane protein NAP-22) (22 kDa neuronal
           tissue-enriched acidic protein)
          Length = 225

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
 Frame = -3

Query: 271 GPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMR----AAASSPLTPMDAAP 131
           GP AG EA  +  +S  +   +   A EEGE +     AA+ P    DAAP
Sbjct: 113 GPAAGGEAPKAGEASAESTGAADGAAPEEGEAKKTEAPAAAGPEAKSDAAP 163

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>CUL4B_HUMAN (Q13620) Cullin-4B (CUL-4B)|
          Length = 895

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = -3

Query: 235 SSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPPCHTHQTHARCLLFPILSLSH 68
           SSS S++ +S+E    +    ++++ PL P D+A P     T + CL   + + SH
Sbjct: 43  SSSSSSSNSSNEREDFDSTSSSSSTPPLQPRDSASP----STSSFCLGVSVAASSH 94

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>HTPG_BRAJA (Q89CK8) Chaperone protein htpG (Heat shock protein htpG) (High|
           temperature protein G)
          Length = 625

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -2

Query: 299 RRAGPGR-WMWTRSGGRGGSQLEQQRQQCAHISRG 198
           RRAG    W WT SGG G        +  A ++RG
Sbjct: 145 RRAGESDVWSWTSSGGSGFEIARASEEDAARVTRG 179

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>ZCH10_RAT (Q5EB97) Zinc finger CCHC domain-containing protein 10|
          Length = 173

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = -3

Query: 304 SGGEQDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPP 128
           S  E    DG    +   +A S SSS S++ +S     +     +++SS  +  D  PP
Sbjct: 109 SSSEDSDADGSLSSSSSSSAYSSSSSSSSSSSSSSSDSDSSSSSSSSSSSESSSDDEPP 167

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>NFE2_HUMAN (Q16621) Transcription factor NF-E2 45 kDa subunit (Nuclear factor,|
           erythroid-derived 2 45 kDa subunit) (p45 NF-E2) (Leucine
           zipper protein NF-E2)
          Length = 373

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = -2

Query: 308 KERRRAGPGRWMWTRSGGRGGSQLEQQRQQCAHISRGCKRGRRDESGCLLSPHTY 144
           +E  R    R    R+ G     LE  RQQ   + R   +  RDESG   SP  Y
Sbjct: 296 RELERLTNERERLLRARGEADRTLEVMRQQLTELYRDIFQHLRDESGNSYSPEEY 350

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>K1267_HUMAN (Q7Z3B3) Protein KIAA1267|
          Length = 1105

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 19/68 (27%), Positives = 26/68 (38%)
 Frame = -3

Query: 301  GGEQDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPPCH 122
            G    Q     P   + A+  +SSS S +  SH  +          S+PLTP+    P H
Sbjct: 953  GRTTPQLGSANPSTPQPASPDVSSSHSLSEYSHGQSPRSPISPELHSAPLTPVARDTPRH 1012

Query: 121  THQTHARC 98
                  RC
Sbjct: 1013 LASEDTRC 1020

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>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
 Frame = -3

Query: 292 QDQGDGCGPEAGEEAAVSLSSSGSN------ARTSHEDAKEEGEMRAAASSPLTPMDAAP 131
           +++G   GP+ G + +    SSG +         S + A+ E  + AAA+    P    P
Sbjct: 27  EEEGIASGPDGGSQGSRRRGSSGEDLLFGPGGLFSDDAAEAEAAVLAAAAGATRP--PRP 84

Query: 130 PCHTHQTHAR 101
           P    Q HAR
Sbjct: 85  PSAQQQRHAR 94

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>TAOK1_RAT (O88664) Serine/threonine-protein kinase TAO1 (EC 2.7.11.1)|
           (Thousand and one amino acid protein 1)
          Length = 1001

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -3

Query: 244 VSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPPCHTHQTHAR 101
           V  +SS  + +   E+ +EEG+ R  AS+P +P    P    H++H R
Sbjct: 390 VMSNSSVIHLKPEEENYQEEGDPRTRASAPQSP----PQVSRHKSHYR 433

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>NFL_COTJA (Q02916) Neurofilament triplet L protein (Neurofilament light|
           polypeptide) (NF-L)
          Length = 555

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -3

Query: 298 GEQDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDA-KEEGEMRAAA 164
           GE+++G+    E GEE+  +   +G   +   E A KEE E++  A
Sbjct: 510 GEEEEGEETAAEDGEESQETAEETGEEEKEEKEAAGKEETEVKKKA 555

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>BASP_RAT (Q05175) Brain acid soluble protein 1 (BASP1 protein) (Neuronal|
           axonal membrane protein NAP-22) (22 kDa neuronal
           tissue-enriched acidic protein)
          Length = 219

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = -3

Query: 271 GPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMR---AAASSPLTPMDAAP 131
           GP AG EA  +  +S  +   +    +EEGE +   A A+ P    DAAP
Sbjct: 112 GPAAGGEAPKAGEASAESTGAADGAPQEEGEAKKTEAPAAGPEAKSDAAP 161

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>XPC_MOUSE (P51612) DNA-repair protein complementing XP-C cells homolog|
           (Xeroderma pigmentosum group C-complementing protein
           homolog) (p125)
          Length = 930

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
 Frame = -2

Query: 308 KERRRAGPGRWMWTRSGGRGGSQLEQQRQ-------QCAHISRGCKRGRRDESG 168
           K++R + P R   T++G +  S+ ++  Q       + +  S GCKRG++  SG
Sbjct: 459 KQKRASAPQR---TKAGSKSASKTQRGSQCEPSSFPEASSSSSGCKRGKKVSSG 509

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>VE2_HPV47 (P22420) Regulatory protein E2|
          Length = 506

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
 Frame = -2

Query: 269 TRSGGRGGSQLEQQRQQCAHIS--------RGCKRGRRDESGCLLSPHTYGRRSSLPHSP 114
           +R GGRG S  ++ R    + S        RG  RGR+  +G         RR S   SP
Sbjct: 318 SRRGGRGSSTRQRSRSPSTYTSKRSREGNTRGRGRGRQGRAGSSGGREQRRRRRSFSTSP 377

Query: 113 NS 108
           +S
Sbjct: 378 DS 379

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>SRBP2_CRIGR (Q60429) Sterol regulatory element-binding protein 2 (SREBP-2)|
           (Sterol regulatory element-binding transcription factor
           2)
          Length = 1139

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -3

Query: 277 GCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPL---TPMDAAP 131
           G G      ++ S SSSGSN+R +   A + G  R+ +  PL   +P  A+P
Sbjct: 56  GGGSSGSSSSSNSSSSSGSNSRGNGGAATDPGVQRSFSQVPLPTFSPSTASP 107

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>ETV7_HUMAN (Q9Y603) Transcription factor ETV7 (Transcription factor Tel-2)|
           (ETS-related protein Tel2) (Tel-related Ets factor)
          Length = 341

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -3

Query: 190 EEGEMRAAASSPLTPMDAAPPCHTHQTHARC 98
           +EGE+   A SP++P+ A PP  TH   ARC
Sbjct: 2   QEGEL---AISPISPVAAMPPLGTH-VQARC 28

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>SOX4_MOUSE (Q06831) Transcription factor SOX-4|
          Length = 440

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -3

Query: 292 QDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSP 155
           +D G GC P+    +  S ++S   A  S  D +    +RAA+ +P
Sbjct: 294 EDGGPGCSPDGRSLSGRSSAASSPAASRSPADHRGYASLRAASPAP 339

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>SKI_HUMAN (P12755) Ski oncogene (C-ski)|
          Length = 728

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 19/45 (42%), Positives = 22/45 (48%)
 Frame = -3

Query: 265 EAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAP 131
           E+ EE   SLSS  S + TS   AK+ G   A A     P  AAP
Sbjct: 487 ESREEFTSSLSSLSSPSFTSSSSAKDLGSPGARALPSAVPDAAAP 531

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>PRA1_CANAL (P87020) pH-regulated antigen PRA1 precursor (58 kDa|
           fibrinogen-binding mannoprotein)
          Length = 299

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = -3

Query: 298 GEQDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPPCHT 119
           GE   GDG   +  + ++   S SGS++  S   +      +   S+P    DA   CHT
Sbjct: 235 GEGCNGDGTSYKKSDFSSFEDSDSGSDSGASSTASSSH---QHTDSNPSATTDANSHCHT 291

Query: 118 H 116
           H
Sbjct: 292 H 292

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>GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)|
          Length = 932

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
 Frame = -3

Query: 280 DGCGPEAGEEAAVSLSSSGSNARTSHEDAKEE-----GEMRAAASSPLTPMDAAPP 128
           DG G  A    A   + S +    S  DA  +      E R+ A+ P+TP  AAPP
Sbjct: 747 DGAGGPAFSFQAAPRAPSPAPRPPSRRDAGLQVSLGAAETRSVATGPMTPQAAAPP 802

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>ZN326_MOUSE (O88291) Zinc finger protein 326 (Zinc finger protein-associated|
           with nuclear matrix of 75 kDa)
          Length = 580

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
 Frame = -3

Query: 304 SGGEQDQGDGCGPE-------AGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLT 149
           +G  +++GD  G E       AGE  AV  +     A  + E+ +EEG    AA +  T
Sbjct: 514 AGSVEEEGDVEGEEGTAEAAAAGEADAVGEAEGAGEAEEAEEEEEEEGTQEFAAQACAT 572

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>GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)|
          Length = 1008

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -3

Query: 280 DGCGPEAGE-EAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPP 128
           DG G  A   +AA    S  S      + +    E R+ A+ P+TP  AAPP
Sbjct: 833 DGAGGSAFSFQAAPRAPSPPSRRDAGLQVSLGAAETRSVATGPMTPQAAAPP 884

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>CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD9) (CHD-9) (Peroxisomal
            proliferator-activated receptor A-interacting complex 320
            kDa protein) (PPAR-alpha-interacting complex protein 320
            kDa)
          Length = 2885

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -3

Query: 307  RSGGEQDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEE 185
            RSG        C   +   ++ S SSS S++ +S E   EE
Sbjct: 2160 RSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEE 2200

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>KCNAB_DROME (P17970) Potassium voltage-gated channel protein Shab|
          Length = 985

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
 Frame = -3

Query: 277 GCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPL--TPMDAAPPCHTHQT 110
           G G  AG  A  S++ SGS A T        G    AA   +   P   A P H+  T
Sbjct: 155 GSGAGAGAGAGASVTGSGSGAGTGTGTGAGSGSGSGAAGKEVRYAPFPVASPTHSIPT 212

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>MARCS_CHICK (P16527) Myristoylated alanine-rich C-kinase substrate (MARCKS)|
          Length = 280

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = -3

Query: 298 GEQDQGDGCGPEA--GEEAAVSLSSSGSNARTSHEDAKEE-GEMRAAASSPLTPMDA 137
           G +++     PEA  GEE   +   + + A  S E AKEE G+ + A S    P  A
Sbjct: 158 GGKEEAAAAAPEAAGGEEGKAAAEEASAAAAGSREAAKEEAGDSQEAKSDEAAPEKA 214

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>K1949_PIG (Q767M0) Protein KIAA1949 homolog|
          Length = 618

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 208 SHEDAKEEGEMRAAASSPLTPMDAAPP 128
           S +  +E GE+R   ++PL+P   APP
Sbjct: 418 SRQQEEEAGELRPPPAAPLSPPPPAPP 444

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>MDM2_XENLA (P56273) Ubiquitin-protein ligase E3 Mdm2 (EC 6.3.2.-) (p53-binding|
           protein Mdm2) (Double minute 2 protein) (Xdm2)
          Length = 473

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 235 SSSGSNARTSHEDAKEEGEMRAAASS-PLTPMDAAPPCHT 119
           S+SGS A  S E  KE+    +  SS PLT +D    C T
Sbjct: 386 STSGSIASCSQEVTKEDSSKESMESSLPLTSIDPCVICQT 425

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>CHD9_HUMAN (Q3L8U1) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD9) (CHD-9) (Chromatin-related
            mesenchymal modulator) (CReMM) (Chromatin remodeling
            factor CHROM1) (Peroxisomal proliferator-activated
            receptor A-inter
          Length = 2897

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = -3

Query: 307  RSGGEQDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASS 158
            RSG        C   +   ++ + SSS S++ +S E   +E E +   S+
Sbjct: 2160 RSGSSSSSSSSCSSASSSSSSSTSSSSSSSSSSSEESDSDEEEAQKREST 2209

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>RL2_ASTYP (Q50264) 50S ribosomal protein L2|
          Length = 276

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = +2

Query: 29  VARPRSHSMGLXXXXXXXXXXXXAPCVSLVSVAGRSGVHRCE---GRGGSRSHLAFLFCI 199
           +  P+  ++G+            A C+SL+++   + VH  E   G+GG  +  A  FC 
Sbjct: 104 ILAPKGLTVGMQIVSGKEADIKVANCLSLMNIPVGTTVHNIELKPGKGGQIARSAGSFCQ 163

Query: 200 LV 205
           ++
Sbjct: 164 II 165

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>MARCS_BOVIN (P12624) Myristoylated alanine-rich C-kinase substrate (MARCKS)|
           (ACAMP-81)
          Length = 331

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
 Frame = -3

Query: 304 SGGEQDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPM--DAAP 131
           +  E+D+     P+AG       +     A         EGE  +AASS  +P   D A 
Sbjct: 82  AAAEKDEPAAAAPDAGASPVEKEAPVEGGAAEPGSPTAAEGEAASAASSSSSPKAEDGAT 141

Query: 130 PCHTHQT 110
           P  +++T
Sbjct: 142 PSPSNET 148

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>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)|
          Length = 1206

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
 Frame = -3

Query: 283 GDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRA-----AASSPLTPMDAAPPCHT 119
           G    P+  ++  VS ++S S++  S   A       A     AA+S  T   AA   H 
Sbjct: 243 GSNSTPQQQQQQLVSSNNSSSSSNNSFTKASSPNNNGARSVGGAATSAATGTTAAAGSHH 302

Query: 118 HQTH 107
           HQ H
Sbjct: 303 HQPH 306

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>DNB2_ADE04 (P06500) Early E2A DNA-binding protein|
          Length = 512

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 257 GRGGSQLEQQRQQCAHISRGCKR---GRRDES--GCLLSPHTYGR 138
           GRGGSQLE++R++     RG      GR   S     L  HTY R
Sbjct: 3   GRGGSQLERRRERTPDRGRGSASHPPGRESPSPPPLPLKRHTYRR 47

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>ACH3_DROME (P04755) Acetylcholine receptor protein, beta-like subunit 1|
           precursor
          Length = 521

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 304 SGGEQDQGDGCGPEAGEEAAVSLSSSGSNARTSHE 200
           SGGE   GDGC  E+    ++ LS   S A  + E
Sbjct: 419 SGGELGLGDGCRRESESSDSILLSPEASKATEAVE 453

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>ZBTB4_HUMAN (Q9P1Z0) Zinc finger and BTB domain-containing protein 4|
           (KAISO-like zinc finger protein 1) (KAISO-L1)
          Length = 1013

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 277 GCGPE-AGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPP 128
           G  P  A   AA S SSS S++ +S   A       +++  P +P  ++PP
Sbjct: 73  GAAPNPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPPPASPPASSPP 123

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>RBM10_HUMAN (P98175) RNA-binding protein 10 (RNA-binding motif protein 10)|
           (DXS8237E)
          Length = 929

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 15/69 (21%), Positives = 28/69 (40%)
 Frame = -3

Query: 277 GCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPPCHTHQTHARC 98
           G  P   +++A + SS G+ A +          +++   SP  P  A PP  +       
Sbjct: 501 GAAPGIYQQSAEASSSQGTAANSQSYTIMSPAVLKSELQSPTHPSSALPPATSPTAQESY 560

Query: 97  LLFPILSLS 71
             +P+  +S
Sbjct: 561 SQYPVPDVS 569

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>PAN1_YEAST (P32521) Protein PAN1|
          Length = 1480

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 15/58 (25%), Positives = 25/58 (43%)
 Frame = -3

Query: 301  GGEQDQGDGCGPEAGEEAAVSLSSSGSNARTSHEDAKEEGEMRAAASSPLTPMDAAPP 128
            G ++D+ DG   E      V++ +    A+  H D      + AA    +TP+  A P
Sbjct: 1271 GLDEDEDDGWSDEDESNNRVAVDNKVEEAKIGHPDHARAPPVTAAPLPSVTPVPPAVP 1328


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,957,239
Number of Sequences: 219361
Number of extensions: 671507
Number of successful extensions: 2897
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 2723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2869
length of database: 80,573,946
effective HSP length: 92
effective length of database: 60,392,734
effective search space used: 1449425616
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result