ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl27b09 |
|---|---|
| Clone Library Name | barley_pub |
>SND1_BOVIN (Q863B3) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) Length = 910 Score = 78.6 bits (192), Expect = 3e-15 Identities = 47/110 (42%), Positives = 64/110 (58%), Gaps = 13/110 (11%) Frame = +1 Query: 85 RGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGV---------DEPFAW 237 RG VK V SG +++ G + PPE+ I LS + A LARR V DEP+A+ Sbjct: 21 RGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLARRAAVAQPDAKDTPDEPWAF 80 Query: 238 ESREFLRKLCVGKEVTFRVDYTAPNIGREFGTVYLG----DKNVAYLVVA 375 +REFLRK +GKEV F ++ P GRE+G +YLG +N+A +VA Sbjct: 81 PAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVA 129 Score = 42.4 bits (98), Expect = 3e-04 Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 20/115 (17%) Frame = +1 Query: 91 KVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGVDE----------PFAWE 240 KV V + D +++ K K+I LS + PRL D+ P+ +E Sbjct: 346 KVMQVLNADAIVV----KLNSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFE 401 Query: 241 SREFLRKLCVGKEVTFRVDYTAPN----------IGREFGTVYLGDKNVAYLVVA 375 +REFLRK +GK+V VDY P R TV +G N+A +V+ Sbjct: 402 AREFLRKKLIGKKVNVTVDYIRPASPATDTVPAFSERTCATVTIGGINIAEALVS 456
>SND1_BRARE (Q7ZT42) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) (4SNc-Tudor domain protein) Length = 897 Score = 78.2 bits (191), Expect = 5e-15 Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 13/122 (10%) Frame = +1 Query: 49 IMASNTGASGWLRGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRG----- 213 + +S A RG VK V SG +++ G + PPE+ I LS + A LARR Sbjct: 9 VQSSQASAPQLQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGALARRAIQGQP 68 Query: 214 ----GVDEPFAWESREFLRKLCVGKEVTFRVDYTAPNIGREFGTVYLG----DKNVAYLV 369 DEP+A+++REF+RK +GKEV F V+ P GRE+G VYLG +N+A + Sbjct: 69 DTKDTPDEPWAFQAREFMRKKVIGKEVCFTVENKTPQ-GREYGMVYLGKDTSGENIAESL 127 Query: 370 VA 375 VA Sbjct: 128 VA 129 Score = 40.8 bits (94), Expect = 8e-04 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 22/117 (18%) Frame = +1 Query: 91 KVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLAR-----------RGGVDEPFAW 237 KV V + D +++ K K+I LS + PRL R D P+ + Sbjct: 347 KVMQVVNADAIVV----KLNSGEYKTIHLSSIRPPRLEGEEKNKDKDKRFRPLYDIPYMF 402 Query: 238 ESREFLRKLCVGKEVTFRVDY-----TAPNIG------REFGTVYLGDKNVAYLVVA 375 E+REFLRK +GK+V VDY A +G R TV +G N+A +V+ Sbjct: 403 EAREFLRKKLIGKKVNVTVDYIRAATNAMEMGVPAFPERTCATVTIGGINIAEALVS 459
>SND1_MOUSE (Q78PY7) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) Length = 910 Score = 78.2 bits (191), Expect = 5e-15 Identities = 51/129 (39%), Positives = 71/129 (55%), Gaps = 19/129 (14%) Frame = +1 Query: 46 AIMASNTGASGW------LRGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLAR 207 A A ++G+SG RG VK V SG +++ G + PPE+ I LS + A LAR Sbjct: 2 ASSAQSSGSSGGPAVPTVQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLAR 61 Query: 208 RGGV---------DEPFAWESREFLRKLCVGKEVTFRVDYTAPNIGREFGTVYLG----D 348 R DEP+A+ +REFLRK +GKEV F ++ P GRE+G +YLG Sbjct: 62 RAAATQPDGKDTPDEPWAFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNG 120 Query: 349 KNVAYLVVA 375 +N+A +VA Sbjct: 121 ENIAESLVA 129 Score = 41.6 bits (96), Expect = 5e-04 Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 20/115 (17%) Frame = +1 Query: 91 KVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLAR----------RGGVDEPFAWE 240 KV V + D +++ K K+I LS + PRL R D P+ +E Sbjct: 346 KVMQVLNADAIVV----KLNSGDYKTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPYMFE 401 Query: 241 SREFLRKLCVGKEVTFRVDYTAPN----------IGREFGTVYLGDKNVAYLVVA 375 +REFLRK +GK+V VDY P R TV +G N+A +V+ Sbjct: 402 AREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVS 456
>SND1_RAT (Q66X93) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) (SND p102) (p105 coactivator) Length = 909 Score = 77.8 bits (190), Expect = 6e-15 Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 19/126 (15%) Frame = +1 Query: 55 ASNTGASGW------LRGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGG 216 A ++G+SG RG VK V SG +++ G + PPE+ I LS + A LARR Sbjct: 4 AQSSGSSGGPAVPTVQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLARRAA 63 Query: 217 V---------DEPFAWESREFLRKLCVGKEVTFRVDYTAPNIGREFGTVYLG----DKNV 357 DEP+A+ +REFLRK +GKEV F ++ P GRE+G +YLG +N+ Sbjct: 64 ATQPDGKDTPDEPWAFPAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENI 122 Query: 358 AYLVVA 375 A +VA Sbjct: 123 AESLVA 128 Score = 42.0 bits (97), Expect = 4e-04 Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 20/115 (17%) Frame = +1 Query: 91 KVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLAR----------RGGVDEPFAWE 240 KV V + D +++ K K+I LS + PRL R D P+ +E Sbjct: 345 KVMQVLNADAIVV----KLNSGDYKTIHLSSIRPPRLEGDNIQDKNKKLRPLYDIPYMFE 400 Query: 241 SREFLRKLCVGKEVTFRVDYTAPN----------IGREFGTVYLGDKNVAYLVVA 375 +REFLRK +GK+V+ VDY P R TV +G N+A +V+ Sbjct: 401 AREFLRKKLIGKKVSVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVS 455
>SND1_HUMAN (Q7KZF4) Staphylococcal nuclease domain-containing protein 1 (p100| co-activator) (100 kDa coactivator) (EBNA2 coactivator p100) Length = 910 Score = 76.6 bits (187), Expect = 1e-14 Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 13/110 (11%) Frame = +1 Query: 85 RGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGV---------DEPFAW 237 RG +K V SG +++ G + PPE+ I LS + A LARR DEP+A+ Sbjct: 21 RGIIKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGNLARRAAATQPDAKDTPDEPWAF 80 Query: 238 ESREFLRKLCVGKEVTFRVDYTAPNIGREFGTVYLG----DKNVAYLVVA 375 +REFLRK +GKEV F ++ P GRE+G +YLG +N+A +VA Sbjct: 81 PAREFLRKKLIGKEVCFTIENKTPQ-GREYGMIYLGKDTNGENIAESLVA 129 Score = 42.4 bits (98), Expect = 3e-04 Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 20/115 (17%) Frame = +1 Query: 91 KVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGVDE----------PFAWE 240 KV V + D +++ K K+I LS + PRL D+ P+ +E Sbjct: 346 KVMQVLNADAIVV----KLNSGDYKTIHLSSIRPPRLEGENTQDKNKKLRPLYDIPYMFE 401 Query: 241 SREFLRKLCVGKEVTFRVDYTAPN----------IGREFGTVYLGDKNVAYLVVA 375 +REFLRK +GK+V VDY P R TV +G N+A +V+ Sbjct: 402 AREFLRKKLIGKKVNVTVDYIRPASPATETVPAFSERTCATVTIGGINIAEALVS 456
>VG20_BPT4 (P13334) Structural protein of head (Tail tube protein Gp20)| Length = 524 Score = 32.3 bits (72), Expect = 0.29 Identities = 13/47 (27%), Positives = 27/47 (57%) Frame = -1 Query: 354 VLVAEVDSAKFSPDVRSCVIHSECDLLSYAKFPQKLPAFPSKWLIDS 214 V+ +D +KFSP +++ ++ D+L++ F +K +W +DS Sbjct: 108 VVALNLDKSKFSPKIKNMMLDEFSDVLNHLSFQRKGSDHFRRWYVDS 154
>CARX_BACSU (P36838) Carbamoyl-phosphate synthase arginine-specific small chain| (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain) Length = 353 Score = 30.8 bits (68), Expect = 0.84 Identities = 15/52 (28%), Positives = 24/52 (46%) Frame = -1 Query: 363 VGNVLVAEVDSAKFSPDVRSCVIHSECDLLSYAKFPQKLPAFPSKWLIDSTT 208 +GN + E D P V++ V++ CD S+ + L + KW I T Sbjct: 57 IGNYGINEKDFESKKPQVKAAVVYEACDHFSHYEAVYSLKEYLQKWNIPLLT 108
>GBLP_HYDAT (Q25189) Guanine nucleotide-binding protein beta subunit-like| protein (Receptor of activated protein kinase C) (RACK) Length = 317 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%) Frame = +2 Query: 278 RSHSEWITQLLTSGEN--LALSTSATRTLPTWWL 373 + H+ W+TQ+ T+ +N L LS S +TL W L Sbjct: 11 KGHNGWVTQIATTPQNPDLILSASRDKTLIQWQL 44
>HISX_BRAJA (P59397) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 431 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = +1 Query: 22 LAAGQSQGAIMASNTGASGWLRGKVKAV----TSGDCLLIMGSTKAEIPPEKSITLSYLM 189 + AG S+ ++A +TG + W+ + A TS +LI S + EK++ Sbjct: 232 MIAGPSEVLVIADDTGNADWIAADLLAQAEHDTSAQSILITDSARLAADVEKAVEAQLKT 291 Query: 190 APRLA 204 PR A Sbjct: 292 LPRTA 296
>Y38K_CORSE (Q39635) Hypothetical 38.1 kDa protein| Length = 338 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +1 Query: 226 PFAWESREFLRKLCVGKEVTFRVDYTAPNIGREFGTVY 339 PF E++E L KL VGK +T + Y GR G +Y Sbjct: 240 PFGKEAKEELIKLVVGKCLTVHI-YEEDRYGRSVGDIY 276
>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 4 (Hyperpolarization-activated cation channel 4) (HAC-4) Length = 1175 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +1 Query: 25 AAG--QSQGAIMASNTGASGWLRGKVKAVTSGDCLLIMGS 138 AAG +S+GA + G RG K+ T+GDC GS Sbjct: 66 AAGGAESRGAALGGAADGEGPARGAAKSSTNGDCRRFRGS 105
>MTFA_MANSM (Q65U59) Putative RNA 2'-O-ribose methyltransferase mtfA (EC| 2.1.1.-) Length = 363 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = -1 Query: 375 SNHQVGNVLVAEVDSAKFSPDVRSCVIHSECDLLSYAKFPQKLPAFPSKWLID 217 S H G + D KF P RS + CD++ P ++ A +KWL++ Sbjct: 253 SLHDTGRIDHCPEDGFKFQPPKRSKIDWLVCDMVEQ---PIRIAALIAKWLVN 302
>RIBD2_BUCAI (P57534) 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC| 1.1.1.193) (HTP reductase) Length = 207 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = -1 Query: 300 VIHSECDLLSYAKFPQKLPAFPSKWLIDSTTTSQPWGHKV*QSDGLLW 157 V + E D + + FP K+ P + +IDS QP H + ++ G +W Sbjct: 44 VRYKELDKKTLSIFPNKIFQHPIRVIIDSKNRVQP-SHNIIKTKGKIW 90
>KAPR_USTMA (P49605) cAMP-dependent protein kinase regulatory subunit (PKA| regulatory subunit) Length = 522 Score = 28.5 bits (62), Expect = 4.1 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%) Frame = -2 Query: 233 ANGSSTPPRRASLGAIRYDRVMDFSGG----ISALVLPMMRRQSPEVTAFTLPLSHPEAP 66 A G ++P +RASL D +GG +++L +PM QSP+ T + P AP Sbjct: 78 APGLASPTQRASL--FHSDPFAPGAGGGALPVASLAVPMDASQSPDSTPAPATPAAPAAP 135 Query: 65 VFDAMIAPWDWPAASG 18 A AP+ SG Sbjct: 136 A--APAAPFSSLGGSG 149
>PURA1_BURS3 (Q39FS0) Adenylosuccinate synthetase 1 (EC 6.3.4.4) (IMP--aspartate| ligase 1) (AdSS 1) (AMPSase 1) Length = 448 Score = 28.1 bits (61), Expect = 5.4 Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 12/121 (9%) Frame = +1 Query: 10 RRRPLAAGQSQGAIMASNTG-------ASGWL----RGKVKAVTSGDCLLIMGSTKAEIP 156 R +P+ A S+ A+N G A G L G VTS +C+ S A + Sbjct: 206 RLKPMVADVSRRLYDANNAGQNLLFEGAQGTLLDIDHGTYPFVTSSNCVAGAASAGAGVG 265 Query: 157 PEKSITLSYLMAPRLARRGGVDE-PFAWESREFLRKLCVGKEVTFRVDYTAPNIGREFGT 333 P+K L+Y++ A V PF E + + +V T N+G+EFG+ Sbjct: 266 PQK---LNYILGITKAYCTRVGSGPFPSELYD-----ADNPQRQDQVGVTLANVGKEFGS 317 Query: 334 V 336 V Sbjct: 318 V 318
>CRTE_RHOCA (P17060) Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)| (GGPP synthetase) (Farnesyltranstransferase) Length = 289 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +1 Query: 100 AVTSGDCLLIMG----STKAEIPPEKSITLSYLMAPRLARRGGVDEPFAWES 243 AV +GD LLI G + + P++++ L + RGG+ AWES Sbjct: 106 AVLAGDSLLIRGFEVLADVGAVNPDRALKLISKLGQLSGARGGICAGQAWES 157
>YFI3_ECO57 (Q7BSX4) Putative endonuclease precursor (EC 3.1.-.-)| Length = 153 Score = 28.1 bits (61), Expect = 5.4 Identities = 27/89 (30%), Positives = 37/89 (41%) Frame = +1 Query: 82 LRGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGVDEPFAWESREFLRK 261 + G+V V GD + +M S KA I L + AP + G W S + ++ Sbjct: 21 IHGRVVRVLDGDTIEVMDSRKA-----VRIRLVNIDAPEKKQDYG-----RW-STDMMKS 69 Query: 262 LCVGKEVTFRVDYTAPNIGREFGTVYLGD 348 L GK VT + GR G VY D Sbjct: 70 LVAGKTVTVTY-FQRDRYGRMLGQVYAPD 97
>AMYI_SACDI (P29760) Glucoamylase S2 precursor (EC 3.2.1.3) (Glucan| 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) (GAII) Length = 768 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -1 Query: 231 KWLIDSTTTSQPWGHKV*QSDGLLWRDLCL 142 KW +D+T ++PWG Q+DG R + + Sbjct: 444 KWNVDNTAFTEPWGRP--QNDGPALRSIAI 471
>LPRF_MYCTU (P65314) Putative lipoprotein lprF precursor| Length = 261 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -2 Query: 251 NSLLSQANGSSTPPRRASLGAI 186 N L+SQA GS P R +SLGA+ Sbjct: 2 NGLISQACGSHRPRRPSSLGAV 23
>LPRF_MYCBO (P65315) Putative lipoprotein lprF precursor| Length = 261 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -2 Query: 251 NSLLSQANGSSTPPRRASLGAI 186 N L+SQA GS P R +SLGA+ Sbjct: 2 NGLISQACGSHRPRRPSSLGAV 23
>GPR56_MACMU (Q50DM8) G-protein coupled receptor 56 precursor| Length = 687 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -1 Query: 327 KFSPDVRSCVIHSECDLLSYAKFPQKLPA 241 KF+PD+R + +SE L +A FP+ PA Sbjct: 49 KFTPDLRISIENSEEALTVHAPFPEAHPA 77
>AMYH_SACDI (P04065) Glucoamylase S1 precursor (EC 3.2.1.3) (Glucan| 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) (GAI) Length = 767 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -1 Query: 231 KWLIDSTTTSQPWGHKV*QSDGLLWRDLCL 142 KW +D+T ++PWG Q+DG R + + Sbjct: 443 KWNVDNTAFTEPWGRP--QNDGPALRSIAI 470
>YFI3_ECOLI (Q99342) Putative endonuclease precursor (EC 3.1.-.-) (ORFA)| Length = 153 Score = 27.7 bits (60), Expect = 7.1 Identities = 27/89 (30%), Positives = 37/89 (41%) Frame = +1 Query: 82 LRGKVKAVTSGDCLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGVDEPFAWESREFLRK 261 + G+V V GD + +M S KA I L + AP + G W S + ++ Sbjct: 21 IHGRVVRVLDGDTIEVMDSRKA-----VRIRLVNIDAPEKKQDYG-----RW-STDMMKS 69 Query: 262 LCVGKEVTFRVDYTAPNIGREFGTVYLGD 348 L GK VT + GR G VY D Sbjct: 70 LVAGKTVTVTY-FQRDRYGRILGQVYAPD 97
>COBQ_MYCTU (P0A532) Cobyric acid synthase| Length = 494 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/50 (32%), Positives = 21/50 (42%) Frame = +3 Query: 63 HRSFRMAKGQGEGCDFWGLPSHHGEHQGRDPAREVHHSVIPYGPKAGSSW 212 H+ R+ +G+G G G HHG D A E GP G+ W Sbjct: 375 HKVLRLPRGEGLGVPASGYEIHHGRITRGDTAEEFLGGARD-GPVFGTMW 423
>COBQ_MYCBO (P0A533) Cobyric acid synthase| Length = 494 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/50 (32%), Positives = 21/50 (42%) Frame = +3 Query: 63 HRSFRMAKGQGEGCDFWGLPSHHGEHQGRDPAREVHHSVIPYGPKAGSSW 212 H+ R+ +G+G G G HHG D A E GP G+ W Sbjct: 375 HKVLRLPRGEGLGVPASGYEIHHGRITRGDTAEEFLGGARD-GPVFGTMW 423
>LDHA_COLLI (Q9PW07) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A)| Length = 331 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/53 (28%), Positives = 28/53 (52%) Frame = -1 Query: 372 NHQVGNVLVAEVDSAKFSPDVRSCVIHSECDLLSYAKFPQKLPAFPSKWLIDS 214 N + V++ V K+SPD + ++ + D+L+Y + K+ FP +I S Sbjct: 112 NVNIFKVIIPNV--VKYSPDCKLLIVSNPVDILTYVAW--KISGFPKHRVIGS 160
>MTFA_PASMU (Q9CN71) Putative RNA 2'-O-ribose methyltransferase mtfA (EC| 2.1.1.-) Length = 365 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/53 (28%), Positives = 23/53 (43%) Frame = -1 Query: 375 SNHQVGNVLVAEVDSAKFSPDVRSCVIHSECDLLSYAKFPQKLPAFPSKWLID 217 S H G + D KF P RS + CD++ P ++ KWL++ Sbjct: 253 SLHDTGRIEHCAEDGFKFQPPKRSKIDWLVCDMVEQ---PSRISQLILKWLVN 302
>PFA5_YARLI (Q6C7D1) Palmitoyltransferase PFA5 (EC 2.3.1.-) (Protein fatty| acyltransferase 5) Length = 334 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = +3 Query: 102 CDFWGLPSHHGEHQGRDPAREVHHSVI 182 CD WG+P E Q P R HHS I Sbjct: 113 CDGWGMPKWCSECQTHKPDR-THHSAI 138
>GA2L1_MOUSE (Q8JZP9) GAS2-like protein 1 (Growth arrest-specific 2-like 1)| Length = 678 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = +2 Query: 2 GSGGGGRSPPANPKVLS 52 GSGG GRS P P+ LS Sbjct: 466 GSGGSGRSTPQTPRALS 482
>HGD_RHILO (Q983J4) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)| (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase) Length = 457 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 8/67 (11%) Frame = -1 Query: 360 GNVLVAEVDSAKFSPDVRSCVIHSECDLLSYAKFPQ--------KLPAFPSKWLIDSTTT 205 GN + D A FSP H + + + P FP +WL+ T Sbjct: 286 GNYAPYKYDLATFSPVGAILFDHPDPSIFTVLTAPSGEEGTANIDFVIFPPRWLVAEDTF 345 Query: 204 SQPWGHK 184 PW H+ Sbjct: 346 RPPWYHR 352
>YBBP_ECOLI (P77504) Hypothetical protein ybbP| Length = 804 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/57 (31%), Positives = 25/57 (43%) Frame = +1 Query: 118 CLLIMGSTKAEIPPEKSITLSYLMAPRLARRGGVDEPFAWESREFLRKLCVGKEVTF 288 C+L +G+ + S MA A R + P AW R L VGK++TF Sbjct: 28 CVLALGNISDRMEKGLSQQSREFMAGDRALRSSREVPQAWLEEAQKRGLKVGKQLTF 84
>GBLP_BRARE (O42248) Guanine nucleotide-binding protein beta subunit 2-like 1| (Receptor of activated protein kinase C) (RACK) Length = 317 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 2/34 (5%) Frame = +2 Query: 278 RSHSEWITQLLTSGE--NLALSTSATRTLPTWWL 373 + HS W+TQ+ T+ + ++ LS S +T+ W L Sbjct: 12 KGHSGWVTQIATTPQFPDMILSASRDKTIIMWKL 45
>AT8B2_MOUSE (P98199) Probable phospholipid-transporting ATPase ID (EC 3.6.3.1)| (ATPase class I type 8B member 2) (Fragment) Length = 347 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%) Frame = +2 Query: 233 LGKAGSF*GNFA*ERRSHSEWITQLLTSGEN-----LALSTSATRTLPTW 367 +G+ GS +A SH E +L+ SG+N LALS+ +TR+ +W Sbjct: 276 VGRTGSRRSGYA---FSHQEGFGELIMSGKNMRLSSLALSSFSTRSSSSW 322 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,589,004 Number of Sequences: 219361 Number of extensions: 1335152 Number of successful extensions: 4477 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4251 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4460 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
