Clone Name | bastl27b01 |
---|---|
Clone Library Name | barley_pub |
>gb|U42608.1|GMU42608 Glycine max clathrin heavy chain mRNA, complete cds Length = 5537 Score = 301 bits (152), Expect = 1e-78 Identities = 344/408 (84%) Strand = Plus / Plus Query: 23 gttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaagacaagttggag 82 ||||| || ||||||||||| || |||||||| ||||||||||| || || ||| | || Sbjct: 1450 gttgtgaaccagaacaagaaaaatcttttggagaattggttggcggaggataagcttgaa 1509 Query: 83 tgcagtgaagagcttggagatcttgtaaagacggtggacaatgatcttgcgctgaaaata 142 |||||||| ||||| ||||||||||||||||| ||||||||||||||||| | |||||| Sbjct: 1510 tgcagtgaggagctaggagatcttgtaaagactgtggacaatgatcttgctttaaaaata 1569 Query: 143 tacataaaggctagggcaacccctaaagttgtcgctgcttttgctgagaggagggagttt 202 ||||| || || || || || || |||||||| ||||||||||||||||| ||||||||| Sbjct: 1570 tacatcaaagccagagctactccaaaagttgttgctgcttttgctgagagaagggagttt 1629 Query: 203 gacaagatccttatatactcaaagcaggttggatacactcctgactacctcttcctcctc 262 |||||||| || |||||||| ||||||||||| ||||| |||||||| |||||||| | Sbjct: 1630 gacaagattctaatatactctaagcaggttgggtacacacctgactatctcttccttttg 1689 Query: 263 cagaccatcttacgtacggatccacagggagctgtcaactttgctctcatgatgtcacaa 322 || || || | || || ||||| ||||| ||||| || ||||| | |||||||| ||| Sbjct: 1690 caaacaattctccggacagatcctcagggtgctgttaattttgcattaatgatgtcgcaa 1749 Query: 323 atggaggggggttgcccactggattataataccataactgatctcttccttcagagaaat 382 |||||||| ||||||||| | ||||| || |||||||||||||| || |||||||||||| Sbjct: 1750 atggagggaggttgcccagttgattacaacaccataactgatctgtttcttcagagaaat 1809 Query: 383 atgatacgagaagcaacagcttttctgttggatgttctgaaaccaaat 430 |||| || || |||||||| |||||| | |||||||||||||||||| Sbjct: 1810 ctgatccgtgaggcaacagcctttctgctagatgttctgaaaccaaat 1857
>ref|NM_111950.2| Arabidopsis thaliana structural molecule AT3G11130 mRNA, complete cds Length = 5785 Score = 216 bits (109), Expect = 5e-53 Identities = 343/421 (81%) Strand = Plus / Plus Query: 12 tatctcgacttgttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaag 71 ||||||| |||||||| ||||| ||||| |||||||| |||||||| ||||||||||| | Sbjct: 1584 tatctcggcttgttgtgaatcaaaacaaaaagaacctcttggaaaactggttggcagagg 1643 Query: 72 acaagttggagtgcagtgaagagcttggagatcttgtaaagacggtggacaatgatcttg 131 | ||||| || ||||||||||| || ||||| ||||| || || ||||| ||||| |||| Sbjct: 1644 ataagttagaatgcagtgaagaactcggagaccttgtcaaaactgtggataatgaccttg 1703 Query: 132 cgctgaaaatatacataaaggctagggcaacccctaaagttgtcgctgcttttgctgaga 191 | || ||||||||||| || ||||| || || || ||||| || || |||||||| ||| Sbjct: 1704 ctctaaaaatatacatcaaagctagagctactccaaaagtcgttgcagcttttgcagagc 1763 Query: 192 ggagggagtttgacaagatccttatatactcaaagcaggttggatacactcctgactacc 251 | |||||||||||||| || | || || |||||||||||||| ||||| ||||| ||| Sbjct: 1764 gaagggagtttgacaaaatattgatttattcaaagcaggttgggtacacacctgattaca 1823 Query: 252 tcttcctcctccagaccatcttacgtacggatccacagggagctgtcaactttgctctca 311 | || || || || || || | ||||||||||| |||||||| || || |||||| | | Sbjct: 1824 tgtttcttctgcaaacgatactccgtacggatcctcagggagcagtaaattttgctttaa 1883 Query: 312 tgatgtcacaaatggaggggggttgcccactggattataataccataactgatctcttcc 371 ||||||| |||||||| || ||||| ||| | || || || || || |||||||| |||| Sbjct: 1884 tgatgtcccaaatggaaggaggttgtccagttgactacaacactatcactgatcttttcc 1943 Query: 372 ttcagagaaatatgatacgagaagcaacagcttttctgttggatgttctgaaaccaaatt 431 ||||||||||| |||| || ||||| || ||||| || ||||||||||||| ||||||| Sbjct: 1944 ttcagagaaatctgatccgtgaagcgactgctttccttctggatgttctgaagccaaatt 2003 Query: 432 t 432 | Sbjct: 2004 t 2004
>ref|NM_111688.4| Arabidopsis thaliana structural molecule AT3G08530 mRNA, complete cds Length = 5477 Score = 200 bits (101), Expect = 3e-48 Identities = 314/385 (81%) Strand = Plus / Plus Query: 12 tatctcgacttgttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaag 71 ||||||| || ||||| || || |||||||||||||| ||||||| ||||||||||| | Sbjct: 1343 tatctcggctggttgtgaaccaaaacaagaagaacctcctggaaaactggttggcagagg 1402 Query: 72 acaagttggagtgcagtgaagagcttggagatcttgtaaagacggtggacaatgatcttg 131 | || | || ||||||||||| |||||||| ||||| ||||| ||||| |||||||| | Sbjct: 1403 ataaactagaatgcagtgaagaacttggagaccttgtgaagactgtggataatgatctcg 1462 Query: 132 cgctgaaaatatacataaaggctagggcaacccctaaagttgtcgctgcttttgctgaga 191 | |||||||||||||| || ||| |||| || || |||||||| || |||||||| || | Sbjct: 1463 ctctgaaaatatacatcaaagctcgggcgactccaaaagttgtagcagcttttgcagaaa 1522 Query: 192 ggagggagtttgacaagatccttatatactcaaagcaggttggatacactcctgactacc 251 | |||||||||||||| || || || ||||||||||||||||| ||||| ||||| |||| Sbjct: 1523 gaagggagtttgacaaaatactgatttactcaaagcaggttgggtacacacctgattacc 1582 Query: 252 tcttcctcctccagaccatcttacgtacggatccacagggagctgtcaactttgctctca 311 | || || || || ||||| | ||||| ||||| |||||||| || || ||||| | | Sbjct: 1583 tgtttcttctgcaaaccatactccgtacagatcctcagggagcagtaaattttgcattaa 1642 Query: 312 tgatgtcacaaatggaggggggttgcccactggattataataccataactgatctcttcc 371 ||||||| |||||||| || |||| ||| | || || || ||||| |||||||| || | Sbjct: 1643 tgatgtctcaaatggaaggaggttctccagttgactacaacaccatcactgatctttttc 1702 Query: 372 ttcagagaaatatgatacgagaagc 396 ||||||||||| |||| || ||||| Sbjct: 1703 ttcagagaaatctgatccgtgaagc 1727
>emb|BX842379.1|CNS0A4W2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH90ZG08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2000 Score = 200 bits (101), Expect = 3e-48 Identities = 314/385 (81%) Strand = Plus / Plus Query: 12 tatctcgacttgttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaag 71 ||||||| || ||||| || || |||||||||||||| ||||||| ||||||||||| | Sbjct: 1455 tatctcggctggttgtgaaccaaaacaagaagaacctcctggaaaactggttggcagagg 1514 Query: 72 acaagttggagtgcagtgaagagcttggagatcttgtaaagacggtggacaatgatcttg 131 | || | || ||||||||||| |||||||| ||||| ||||| ||||| |||||||| | Sbjct: 1515 ataaactagaatgcagtgaagaacttggagaccttgtgaagactgtggataatgatctcg 1574 Query: 132 cgctgaaaatatacataaaggctagggcaacccctaaagttgtcgctgcttttgctgaga 191 | |||||||||||||| || ||| |||| || || |||||||| || |||||||| || | Sbjct: 1575 ctctgaaaatatacatcaaagctcgggcgactccaaaagttgtagcagcttttgcagaaa 1634 Query: 192 ggagggagtttgacaagatccttatatactcaaagcaggttggatacactcctgactacc 251 | |||||||||||||| || || || ||||||||||||||||| ||||| ||||| |||| Sbjct: 1635 gaagggagtttgacaaaatactgatttactcaaagcaggttgggtacacacctgattacc 1694 Query: 252 tcttcctcctccagaccatcttacgtacggatccacagggagctgtcaactttgctctca 311 | || || || || ||||| | ||||| ||||| |||||||| || || ||||| | | Sbjct: 1695 tgtttcttctgcaaaccatactccgtacagatcctcagggagcagtaaattttgcattaa 1754 Query: 312 tgatgtcacaaatggaggggggttgcccactggattataataccataactgatctcttcc 371 ||||||| |||||||| || |||| ||| | || || || ||||| |||||||| || | Sbjct: 1755 tgatgtctcaaatggaaggaggttctccagttgactacaacaccatcactgatctttttc 1814 Query: 372 ttcagagaaatatgatacgagaagc 396 ||||||||||| |||| || ||||| Sbjct: 1815 ttcagagaaatctgatccgtgaagc 1839
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 111 agacggtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaag 170 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 252845 agactgtggacaatgatcttgctctgaaaatatacataaaggctagggcaacccctaaag 252904 Query: 171 ttgtcgctgcttttgctgagaggagggagtttgacaagatccttatatactcaaagcagg 230 |||| || ||||||||||| || ||||| |||||||||||||||||||| |||||||||| Sbjct: 252905 ttgttgccgcttttgctgaaagaagggaatttgacaagatccttatatattcaaagcagg 252964 Query: 231 t 231 | Sbjct: 252965 t 252965 Score = 153 bits (77), Expect = 6e-34 Identities = 92/97 (94%) Strand = Plus / Plus Query: 12 tatctcgacttgttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaag 71 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 252635 tatctcgacttgttgtcaatcagaacaaaaagaaccttttggaaaactggttggctgaag 252694 Query: 72 acaagttggagtgcagtgaagagcttggagatcttgt 108 |||| ||||||||||||||||| |||||||||||||| Sbjct: 252695 acaaattggagtgcagtgaagaacttggagatcttgt 252731 Score = 123 bits (62), Expect = 6e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 287 cagggagctgtcaactttgctctcatgatgtcacaaatggaggggggttgcccactggat 346 |||||||||||||||||||| |||||||||||||||||||||||||| || ||| | ||| Sbjct: 253225 cagggagctgtcaactttgcgctcatgatgtcacaaatggaggggggctgtccagttgat 253284 Query: 347 tataataccataactgatctcttccttcag 376 || ||||| ||||||||||||||||||||| Sbjct: 253285 tacaatactataactgatctcttccttcag 253314 Score = 111 bits (56), Expect = 2e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 227 caggttggatacactcctgactacctcttcctcctccagaccatcttacgtacggatcca 286 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 253053 caggttggatacacccctgactacctcttcctcctccagaccattttacgtacggatcca 253112 Query: 287 cagg 290 |||| Sbjct: 253113 cagg 253116 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 374 cagagaaatatgatacgagaagcaacagcttttctgttggatgttctgaaaccaaatttg 433 |||||||| |||||||| || ||||||||||| ||| |||||||| | || ||||| ||| Sbjct: 253416 cagagaaacatgatacgtgaggcaacagctttcctgctggatgttttaaagccaaacttg 253475 Query: 434 gaagaacatgcttttcttcagacca 458 || |||||||||||||| |||| Sbjct: 253476 ccggagcatgcttttcttcaaacca 253500 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 ggtggacaatgatcttgcgc 134 |||||||||||||||||||| Sbjct: 18837868 ggtggacaatgatcttgcgc 18837849
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 111 agacggtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaag 170 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 237449 agactgtggacaatgatcttgctctgaaaatatacataaaggctagggcaacccctaaag 237508 Query: 171 ttgtcgctgcttttgctgagaggagggagtttgacaagatccttatatactcaaagcagg 230 |||| || ||||||||||| || ||||| |||||||||||||||||||| |||||||||| Sbjct: 237509 ttgttgccgcttttgctgaaagaagggaatttgacaagatccttatatattcaaagcagg 237568 Query: 231 t 231 | Sbjct: 237569 t 237569 Score = 153 bits (77), Expect = 6e-34 Identities = 92/97 (94%) Strand = Plus / Plus Query: 12 tatctcgacttgttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaag 71 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 237239 tatctcgacttgttgtcaatcagaacaaaaagaaccttttggaaaactggttggctgaag 237298 Query: 72 acaagttggagtgcagtgaagagcttggagatcttgt 108 |||| ||||||||||||||||| |||||||||||||| Sbjct: 237299 acaaattggagtgcagtgaagaacttggagatcttgt 237335 Score = 123 bits (62), Expect = 6e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 287 cagggagctgtcaactttgctctcatgatgtcacaaatggaggggggttgcccactggat 346 |||||||||||||||||||| |||||||||||||||||||||||||| || ||| | ||| Sbjct: 237829 cagggagctgtcaactttgcgctcatgatgtcacaaatggaggggggctgtccagttgat 237888 Query: 347 tataataccataactgatctcttccttcag 376 || ||||| ||||||||||||||||||||| Sbjct: 237889 tacaatactataactgatctcttccttcag 237918 Score = 111 bits (56), Expect = 2e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 227 caggttggatacactcctgactacctcttcctcctccagaccatcttacgtacggatcca 286 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 237657 caggttggatacacccctgactacctcttcctcctccagaccattttacgtacggatcca 237716 Query: 287 cagg 290 |||| Sbjct: 237717 cagg 237720 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 374 cagagaaatatgatacgagaagcaacagcttttctgttggatgttctgaaaccaaatttg 433 |||||||| |||||||| || ||||||||||| ||| |||||||| | || ||||| ||| Sbjct: 238020 cagagaaacatgatacgtgaggcaacagctttcctgctggatgttttaaagccaaacttg 238079 Query: 434 gaagaacatgcttttcttcagacca 458 || |||||||||||||| |||| Sbjct: 238080 ccggagcatgcttttcttcaaacca 238104
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 111 agacggtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaag 170 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 237449 agactgtggacaatgatcttgctctgaaaatatacataaaggctagggcaacccctaaag 237508 Query: 171 ttgtcgctgcttttgctgagaggagggagtttgacaagatccttatatactcaaagcagg 230 |||| || ||||||||||| || ||||| |||||||||||||||||||| |||||||||| Sbjct: 237509 ttgttgccgcttttgctgaaagaagggaatttgacaagatccttatatattcaaagcagg 237568 Query: 231 t 231 | Sbjct: 237569 t 237569 Score = 153 bits (77), Expect = 6e-34 Identities = 92/97 (94%) Strand = Plus / Plus Query: 12 tatctcgacttgttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaag 71 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 237239 tatctcgacttgttgtcaatcagaacaaaaagaaccttttggaaaactggttggctgaag 237298 Query: 72 acaagttggagtgcagtgaagagcttggagatcttgt 108 |||| ||||||||||||||||| |||||||||||||| Sbjct: 237299 acaaattggagtgcagtgaagaacttggagatcttgt 237335 Score = 123 bits (62), Expect = 6e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 287 cagggagctgtcaactttgctctcatgatgtcacaaatggaggggggttgcccactggat 346 |||||||||||||||||||| |||||||||||||||||||||||||| || ||| | ||| Sbjct: 237829 cagggagctgtcaactttgcgctcatgatgtcacaaatggaggggggctgtccagttgat 237888 Query: 347 tataataccataactgatctcttccttcag 376 || ||||| ||||||||||||||||||||| Sbjct: 237889 tacaatactataactgatctcttccttcag 237918 Score = 111 bits (56), Expect = 2e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 227 caggttggatacactcctgactacctcttcctcctccagaccatcttacgtacggatcca 286 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 237657 caggttggatacacccctgactacctcttcctcctccagaccattttacgtacggatcca 237716 Query: 287 cagg 290 |||| Sbjct: 237717 cagg 237720 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 374 cagagaaatatgatacgagaagcaacagcttttctgttggatgttctgaaaccaaatttg 433 |||||||| |||||||| || ||||||||||| ||| |||||||| | || ||||| ||| Sbjct: 238020 cagagaaacatgatacgtgaggcaacagctttcctgctggatgttttaaagccaaacttg 238079 Query: 434 gaagaacatgcttttcttcagacca 458 || |||||||||||||| |||| Sbjct: 238080 ccggagcatgcttttcttcaaacca 238104
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 111 agacggtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaag 170 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 252845 agactgtggacaatgatcttgctctgaaaatatacataaaggctagggcaacccctaaag 252904 Query: 171 ttgtcgctgcttttgctgagaggagggagtttgacaagatccttatatactcaaagcagg 230 |||| || ||||||||||| || ||||| |||||||||||||||||||| |||||||||| Sbjct: 252905 ttgttgccgcttttgctgaaagaagggaatttgacaagatccttatatattcaaagcagg 252964 Query: 231 t 231 | Sbjct: 252965 t 252965 Score = 153 bits (77), Expect = 6e-34 Identities = 92/97 (94%) Strand = Plus / Plus Query: 12 tatctcgacttgttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaag 71 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 252635 tatctcgacttgttgtcaatcagaacaaaaagaaccttttggaaaactggttggctgaag 252694 Query: 72 acaagttggagtgcagtgaagagcttggagatcttgt 108 |||| ||||||||||||||||| |||||||||||||| Sbjct: 252695 acaaattggagtgcagtgaagaacttggagatcttgt 252731 Score = 123 bits (62), Expect = 6e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 287 cagggagctgtcaactttgctctcatgatgtcacaaatggaggggggttgcccactggat 346 |||||||||||||||||||| |||||||||||||||||||||||||| || ||| | ||| Sbjct: 253225 cagggagctgtcaactttgcgctcatgatgtcacaaatggaggggggctgtccagttgat 253284 Query: 347 tataataccataactgatctcttccttcag 376 || ||||| ||||||||||||||||||||| Sbjct: 253285 tacaatactataactgatctcttccttcag 253314 Score = 111 bits (56), Expect = 2e-21 Identities = 62/64 (96%) Strand = Plus / Plus Query: 227 caggttggatacactcctgactacctcttcctcctccagaccatcttacgtacggatcca 286 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 253053 caggttggatacacccctgactacctcttcctcctccagaccattttacgtacggatcca 253112 Query: 287 cagg 290 |||| Sbjct: 253113 cagg 253116 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 374 cagagaaatatgatacgagaagcaacagcttttctgttggatgttctgaaaccaaatttg 433 |||||||| |||||||| || ||||||||||| ||| |||||||| | || ||||| ||| Sbjct: 253416 cagagaaacatgatacgtgaggcaacagctttcctgctggatgttttaaagccaaacttg 253475 Query: 434 gaagaacatgcttttcttcagacca 458 || |||||||||||||| |||| Sbjct: 253476 ccggagcatgcttttcttcaaacca 253500 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 ggtggacaatgatcttgcgc 134 |||||||||||||||||||| Sbjct: 18764095 ggtggacaatgatcttgcgc 18764076
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Minus Query: 111 agacggtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaag 170 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 67544 agactgtggacaatgatcttgctctgaaaatatacataaaggctagggcaacccctaaag 67485 Query: 171 ttgtcgctgcttttgctgagaggagggagtttgacaagatccttatatactcaaagcagg 230 |||| || ||||||||||| || ||||| |||||||||||||||||||| |||||||||| Sbjct: 67484 ttgttgccgcttttgctgaaagaagggaatttgacaagatccttatatattcaaagcagg 67425 Query: 231 t 231 | Sbjct: 67424 t 67424 Score = 153 bits (77), Expect = 6e-34 Identities = 92/97 (94%) Strand = Plus / Minus Query: 12 tatctcgacttgttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaag 71 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 67754 tatctcgacttgttgtcaatcagaacaaaaagaaccttttggaaaactggttggctgaag 67695 Query: 72 acaagttggagtgcagtgaagagcttggagatcttgt 108 |||| ||||||||||||||||| |||||||||||||| Sbjct: 67694 acaaattggagtgcagtgaagaacttggagatcttgt 67658 Score = 123 bits (62), Expect = 6e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 287 cagggagctgtcaactttgctctcatgatgtcacaaatggaggggggttgcccactggat 346 |||||||||||||||||||| |||||||||||||||||||||||||| || ||| | ||| Sbjct: 67164 cagggagctgtcaactttgcgctcatgatgtcacaaatggaggggggctgtccagttgat 67105 Query: 347 tataataccataactgatctcttccttcag 376 || ||||| ||||||||||||||||||||| Sbjct: 67104 tacaatactataactgatctcttccttcag 67075 Score = 111 bits (56), Expect = 2e-21 Identities = 62/64 (96%) Strand = Plus / Minus Query: 227 caggttggatacactcctgactacctcttcctcctccagaccatcttacgtacggatcca 286 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 67336 caggttggatacacccctgactacctcttcctcctccagaccattttacgtacggatcca 67277 Query: 287 cagg 290 |||| Sbjct: 67276 cagg 67273 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 374 cagagaaatatgatacgagaagcaacagcttttctgttggatgttctgaaaccaaatttg 433 |||||||| |||||||| || ||||||||||| ||| |||||||| | || ||||| ||| Sbjct: 66973 cagagaaacatgatacgtgaggcaacagctttcctgctggatgttttaaagccaaacttg 66914 Query: 434 gaagaacatgcttttcttcagacca 458 || |||||||||||||| |||| Sbjct: 66913 ccggagcatgcttttcttcaaacca 66889
>emb|BX000491.1|CNS08CDH Oryza sativa chromosome 12, . BAC OSJNBb0068K19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 96667 Score = 176 bits (89), Expect = 4e-41 Identities = 113/121 (93%) Strand = Plus / Minus Query: 111 agacggtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaag 170 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 22411 agactgtggacaatgatcttgctctgaaaatatacataaaggctagggcaacccctaaag 22352 Query: 171 ttgtcgctgcttttgctgagaggagggagtttgacaagatccttatatactcaaagcagg 230 |||| || ||||||||||| || ||||| |||||||||||||||||||| |||||||||| Sbjct: 22351 ttgttgccgcttttgctgaaagaagggaatttgacaagatccttatatattcaaagcagg 22292 Query: 231 t 231 | Sbjct: 22291 t 22291 Score = 153 bits (77), Expect = 6e-34 Identities = 92/97 (94%) Strand = Plus / Minus Query: 12 tatctcgacttgttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaag 71 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct: 22621 tatctcgacttgttgtcaatcagaacaaaaagaaccttttggaaaactggttggctgaag 22562 Query: 72 acaagttggagtgcagtgaagagcttggagatcttgt 108 |||| ||||||||||||||||| |||||||||||||| Sbjct: 22561 acaaattggagtgcagtgaagaacttggagatcttgt 22525 Score = 123 bits (62), Expect = 6e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 287 cagggagctgtcaactttgctctcatgatgtcacaaatggaggggggttgcccactggat 346 |||||||||||||||||||| |||||||||||||||||||||||||| || ||| | ||| Sbjct: 22031 cagggagctgtcaactttgcgctcatgatgtcacaaatggaggggggctgtccagttgat 21972 Query: 347 tataataccataactgatctcttccttcag 376 || ||||| ||||||||||||||||||||| Sbjct: 21971 tacaatactataactgatctcttccttcag 21942 Score = 111 bits (56), Expect = 2e-21 Identities = 62/64 (96%) Strand = Plus / Minus Query: 227 caggttggatacactcctgactacctcttcctcctccagaccatcttacgtacggatcca 286 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 22203 caggttggatacacccctgactacctcttcctcctccagaccattttacgtacggatcca 22144 Query: 287 cagg 290 |||| Sbjct: 22143 cagg 22140 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 374 cagagaaatatgatacgagaagcaacagcttttctgttggatgttctgaaaccaaatttg 433 |||||||| |||||||| || ||||||||||| ||| |||||||| | || ||||| ||| Sbjct: 21840 cagagaaacatgatacgtgaggcaacagctttcctgctggatgttttaaagccaaacttg 21781 Query: 434 gaagaacatgcttttcttcagacca 458 || |||||||||||||| |||| Sbjct: 21780 ccggagcatgcttttcttcaaacca 21756
>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01, complete sequence Length = 153643 Score = 143 bits (72), Expect = 6e-31 Identities = 87/92 (94%) Strand = Plus / Minus Query: 116 gtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaagttgtc 175 ||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||| Sbjct: 86987 gtggacaatgatcttgcactaaaaatatacataaaggctagggcaacctctaaagttgtt 86928 Query: 176 gctgcttttgctgagaggagggagtttgacaa 207 |||||||||||||| ||||||||||||||||| Sbjct: 86927 gctgcttttgctgaaaggagggagtttgacaa 86896 Score = 143 bits (72), Expect = 6e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 116 gtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaagttgtc 175 ||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||| Sbjct: 81137 gtggacaatgatcttgcactaaaaatatacataaaggctagggcaacctctaaagttgtt 81196 Query: 176 gctgcttttgctgagaggagggagtttgacaa 207 |||||||||||||| ||||||||||||||||| Sbjct: 81197 gctgcttttgctgaaaggagggagtttgacaa 81228
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 143 bits (72), Expect = 6e-31 Identities = 87/92 (94%) Strand = Plus / Minus Query: 116 gtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaagttgtc 175 ||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||| Sbjct: 32568253 gtggacaatgatcttgcactaaaaatatacataaaggctagggcaacctctaaagttgtt 32568194 Query: 176 gctgcttttgctgagaggagggagtttgacaa 207 |||||||||||||| ||||||||||||||||| Sbjct: 32568193 gctgcttttgctgaaaggagggagtttgacaa 32568162 Score = 143 bits (72), Expect = 6e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 116 gtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaagttgtc 175 ||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||| Sbjct: 32562403 gtggacaatgatcttgcactaaaaatatacataaaggctagggcaacctctaaagttgtt 32562462 Query: 176 gctgcttttgctgagaggagggagtttgacaa 207 |||||||||||||| ||||||||||||||||| Sbjct: 32562463 gctgcttttgctgaaaggagggagtttgacaa 32562494
>dbj|AP006415.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT37I11, TM0302a, complete sequence Length = 96704 Score = 99.6 bits (50), Expect = 8e-18 Identities = 80/90 (88%) Strand = Plus / Minus Query: 23 gttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaagacaagttggag 82 ||||| |||||||||||||| || ||||||||||||||||||||||| |||||| | || Sbjct: 39847 gttgtgaatcagaacaagaaaaatcttttggaaaattggttggcagaggacaagcttgaa 39788 Query: 83 tgcagtgaagagcttggagatcttgtaaag 112 |||||||| || || ||||||||||||||| Sbjct: 39787 tgcagtgaggaactaggagatcttgtaaag 39758 Score = 73.8 bits (37), Expect = 5e-10 Identities = 100/121 (82%) Strand = Plus / Minus Query: 111 agacggtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaag 170 |||| ||||||||||| ||||| | |||||||| || || || || || || || |||| Sbjct: 39591 agactgtggacaatgaccttgccttaaaaatatatatcaaagccagagctactccaaaag 39532 Query: 171 ttgtcgctgcttttgctgagaggagggagtttgacaagatccttatatactcaaagcagg 230 |||| ||||| ||||||||| | ||||||||||||||||| || ||||| || ||||||| Sbjct: 39531 ttgttgctgcgtttgctgagcgaagggagtttgacaagattctcatatattctaagcagg 39472 Query: 231 t 231 | Sbjct: 39471 t 39471 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 311 atgatgtcacaaatggaggggggttgcccactggattataataccataactgatctcttc 370 |||||||| ||||||||||| ||||| || || ||||| || |||||||||||||| || Sbjct: 39046 atgatgtctcaaatggagggaggttgtcctcttgattacaacaccataactgatctgttt 38987 Query: 371 cttcag 376 |||||| Sbjct: 38986 cttcag 38981
>gb|AC144729.29| Medicago truncatula clone mth2-15j6, complete sequence Length = 113550 Score = 97.6 bits (49), Expect = 3e-17 Identities = 103/121 (85%) Strand = Plus / Plus Query: 111 agacggtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaag 170 |||| ||||||||||||||||| | ||||||||||| || || || || || || |||| Sbjct: 15892 agactgtggacaatgatcttgctttaaaaatatacatcaaagccagagctactccgaaag 15951 Query: 171 ttgtcgctgcttttgctgagaggagggagtttgacaagatccttatatactcaaagcagg 230 |||| ||||||||||||||||||||||||||||| ||||| || | ||||| ||||||| Sbjct: 15952 ttgttgctgcttttgctgagaggagggagtttgataagattctggtctactctaagcagg 16011 Query: 231 t 231 | Sbjct: 16012 t 16012 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 32 cagaacaagaagaaccttttggaaaattggttggcagaagacaagttggagtgcagtgaa 91 ||||||||||| ||||| |||||||||||||||||||| |||||| | || |||||||| Sbjct: 15656 cagaacaagaaaaacctgttggaaaattggttggcagaggacaagcttgaatgcagtgag 15715 Query: 92 gagcttggagatct 105 ||||| |||||||| Sbjct: 15716 gagctaggagatct 15729 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 311 atgatgtcacaaatggaggggggttgcccactggattataataccataactgatctcttc 370 |||||||| ||||||||||| ||| ||||| | ||||| || |||||||||||||| || Sbjct: 16413 atgatgtctcaaatggagggaggtagcccaattgattacaacaccataactgatctgttt 16472 Query: 371 cttcag 376 |||||| Sbjct: 16473 cttcag 16478 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 228 aggttggatacactcctgactacctcttcctc 259 ||||||||||||| ||||||||||| |||||| Sbjct: 16132 aggttggatacacacctgactaccttttcctc 16163 Score = 40.1 bits (20), Expect = 6.5 Identities = 50/60 (83%) Strand = Plus / Plus Query: 373 tcagagaaatatgatacgagaagcaacagcttttctgttggatgttctgaaaccaaattt 432 ||||||||| |||| || || |||||||||||||| |||||||| | || |||||||| Sbjct: 16599 tcagagaaacctgatccgtgaggcaacagcttttctcctggatgttttaaagccaaattt 16658
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 89.7 bits (45), Expect = 8e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 12 tatctcgacttgttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaag 71 ||||||| |||||||| ||||| ||||| |||||||| |||||||| ||||||||||| | Sbjct: 27986 tatctcggcttgttgtgaatcaaaacaaaaagaacctcttggaaaactggttggcagagg 28045 Query: 72 acaagttggagtgcagtgaagagcttggagatcttgt 108 | ||||| || ||||||||||| || ||||| ||||| Sbjct: 28046 ataagttagaatgcagtgaagaactcggagaccttgt 28082 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 111 agacggtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaag 170 |||| ||||| ||||| ||||| || ||||||||||| || ||||| || || || |||| Sbjct: 28169 agactgtggataatgaccttgctctaaaaatatacatcaaagctagagctactccaaaag 28228 Query: 171 ttgtcgctgcttttgctgagaggagggagtttgacaa 207 | || || |||||||| ||| | |||||||||||||| Sbjct: 28229 tcgttgcagcttttgcagagcgaagggagtttgacaa 28265 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Plus Query: 372 ttcagagaaatatgatacgagaagcaacagcttttctgttggatgttctgaaaccaaatt 431 ||||||||||| |||| || ||||| || ||||| || ||||||||||||| ||||||| Sbjct: 28830 ttcagagaaatctgatccgtgaagcgactgctttccttctggatgttctgaagccaaatt 28889 Query: 432 t 432 | Sbjct: 28890 t 28890
>gb|AC142498.21| Medicago truncatula clone mth2-24a18, complete sequence Length = 114956 Score = 89.7 bits (45), Expect = 8e-15 Identities = 102/121 (84%) Strand = Plus / Plus Query: 111 agacggtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaag 170 |||| ||||||||||||||||| | |||||||| || || || || || || || |||| Sbjct: 59995 agactgtggacaatgatcttgctttaaaaatatatatcaaagccagagctactccaaaag 60054 Query: 171 ttgtcgctgcttttgctgagaggagggagtttgacaagatccttatatactcaaagcagg 230 |||| |||||||| ||||||| ||||||||||||||||| || |||||||| ||||||| Sbjct: 60055 ttgttgctgctttcgctgagaaaagggagtttgacaagattctgatatactctaagcagg 60114 Query: 231 t 231 | Sbjct: 60115 t 60115 Score = 89.7 bits (45), Expect = 8e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 20 cttgttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaagacaagttg 79 |||||||| ||||||||||| || || || ||||| ||||||||||| || |||||| | Sbjct: 59533 cttgttgtgaatcagaacaaaaaaaatctgttggagaattggttggccgaggacaagctt 59592 Query: 80 gagtgcagtgaagagcttggagatcttgt 108 ||||||||||| ||||||||||||||||| Sbjct: 59593 gagtgcagtgaggagcttggagatcttgt 59621 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 311 atgatgtcacaaatggaggggggttgcccactggattataataccataactgatctcttc 370 |||||||| |||||||| || ||||| ||| | ||||| || |||||||||||||| || Sbjct: 60577 atgatgtctcaaatggaaggtggttgtccagttgattacaacaccataactgatctgttt 60636 Query: 371 cttcag 376 |||||| Sbjct: 60637 cttcag 60642
>gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence, complete sequence Length = 90721 Score = 89.7 bits (45), Expect = 8e-15 Identities = 102/121 (84%) Strand = Plus / Minus Query: 111 agacggtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaag 170 |||| ||||| |||||||| || |||||||||||||| || ||| |||| || || |||| Sbjct: 3482 agactgtggataatgatctcgctctgaaaatatacatcaaagctcgggcgactccaaaag 3423 Query: 171 ttgtcgctgcttttgctgagaggagggagtttgacaagatccttatatactcaaagcagg 230 |||| || |||||||| || || |||||||||||||| || || || ||||||||||||| Sbjct: 3422 ttgtagcagcttttgcagaaagaagggagtttgacaaaatactgatttactcaaagcagg 3363 Query: 231 t 231 | Sbjct: 3362 t 3362 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 12 tatctcgacttgttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaag 71 ||||||| || ||||| || || |||||||||||||| ||||||| ||||||||||| | Sbjct: 3664 tatctcggctggttgtgaaccaaaacaagaagaacctcctggaaaactggttggcagagg 3605 Query: 72 acaagttggagtgcagtgaagagcttggagatcttgt 108 | || | || ||||||||||| |||||||| ||||| Sbjct: 3604 ataaactagaatgcagtgaagaacttggagaccttgt 3568
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 89.7 bits (45), Expect = 8e-15 Identities = 84/97 (86%) Strand = Plus / Minus Query: 12 tatctcgacttgttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaag 71 ||||||| |||||||| ||||| ||||| |||||||| |||||||| ||||||||||| | Sbjct: 25294 tatctcggcttgttgtgaatcaaaacaaaaagaacctcttggaaaactggttggcagagg 25235 Query: 72 acaagttggagtgcagtgaagagcttggagatcttgt 108 | ||||| || ||||||||||| || ||||| ||||| Sbjct: 25234 ataagttagaatgcagtgaagaactcggagaccttgt 25198 Score = 58.0 bits (29), Expect = 3e-05 Identities = 98/121 (80%) Strand = Plus / Minus Query: 111 agacggtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaag 170 |||| ||||| ||||| ||||| || ||||||||||| || ||||| || || || |||| Sbjct: 25111 agactgtggataatgaccttgctctaaaaatatacatcaaagctagagctactccaaaag 25052 Query: 171 ttgtcgctgcttttgctgagaggagggagtttgacaagatccttatatactcaaagcagg 230 | || || |||||||| ||| | |||||||||||||| || | || || |||||||||| Sbjct: 25051 tcgttgcagcttttgcagagcgaagggagtttgacaaaatattgatttattcaaagcagg 24992 Query: 231 t 231 | Sbjct: 24991 t 24991 Score = 50.1 bits (25), Expect = 0.007 Identities = 52/61 (85%) Strand = Plus / Minus Query: 372 ttcagagaaatatgatacgagaagcaacagcttttctgttggatgttctgaaaccaaatt 431 ||||||||||| |||| || ||||| || ||||| || ||||||||||||| ||||||| Sbjct: 24450 ttcagagaaatctgatccgtgaagcgactgctttccttctggatgttctgaagccaaatt 24391 Query: 432 t 432 | Sbjct: 24390 t 24390
>gb|AC074395.1|AC074395 Arabidopsis thaliana chromosome 3 BAC T8G24 genomic sequence, complete sequence Length = 29605 Score = 89.7 bits (45), Expect = 8e-15 Identities = 102/121 (84%) Strand = Plus / Minus Query: 111 agacggtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaag 170 |||| ||||| |||||||| || |||||||||||||| || ||| |||| || || |||| Sbjct: 28045 agactgtggataatgatctcgctctgaaaatatacatcaaagctcgggcgactccaaaag 27986 Query: 171 ttgtcgctgcttttgctgagaggagggagtttgacaagatccttatatactcaaagcagg 230 |||| || |||||||| || || |||||||||||||| || || || ||||||||||||| Sbjct: 27985 ttgtagcagcttttgcagaaagaagggagtttgacaaaatactgatttactcaaagcagg 27926 Query: 231 t 231 | Sbjct: 27925 t 27925 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 12 tatctcgacttgttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaag 71 ||||||| || ||||| || || |||||||||||||| ||||||| ||||||||||| | Sbjct: 28227 tatctcggctggttgtgaaccaaaacaagaagaacctcctggaaaactggttggcagagg 28168 Query: 72 acaagttggagtgcagtgaagagcttggagatcttgt 108 | || | || ||||||||||| |||||||| ||||| Sbjct: 28167 ataaactagaatgcagtgaagaacttggagaccttgt 28131
>emb|CT573029.5| M.truncatula DNA sequence from clone MTH2-67H11 on chromosome 3, complete sequence Length = 152399 Score = 89.7 bits (45), Expect = 8e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 20 cttgttgtcaatcagaacaagaagaaccttttggaaaattggttggcagaagacaagttg 79 |||||||| ||||||||||| || || || ||||| ||||||||||| || |||||| | Sbjct: 50844 cttgttgtgaatcagaacaaaaaaaatctgttggagaattggttggccgaggacaagctt 50785 Query: 80 gagtgcagtgaagagcttggagatcttgt 108 ||||||||||| ||||||||||||||||| Sbjct: 50784 gagtgcagtgaggagcttggagatcttgt 50756 Score = 89.7 bits (45), Expect = 8e-15 Identities = 102/121 (84%) Strand = Plus / Minus Query: 111 agacggtggacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaag 170 |||| ||||||||||||||||| | |||||||| || || || || || || || |||| Sbjct: 50382 agactgtggacaatgatcttgctttaaaaatatatatcaaagccagagctactccaaaag 50323 Query: 171 ttgtcgctgcttttgctgagaggagggagtttgacaagatccttatatactcaaagcagg 230 |||| |||||||| ||||||| ||||||||||||||||| || |||||||| ||||||| Sbjct: 50322 ttgttgctgctttcgctgagaaaagggagtttgacaagattctgatatactctaagcagg 50263 Query: 231 t 231 | Sbjct: 50262 t 50262 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 311 atgatgtcacaaatggaggggggttgcccactggattataataccataactgatctcttc 370 |||||||| |||||||| || ||||| ||| | ||||| || |||||||||||||| || Sbjct: 49800 atgatgtctcaaatggaaggtggttgtccagttgattacaacaccataactgatctgttt 49741 Query: 371 cttcag 376 |||||| Sbjct: 49740 cttcag 49735
>dbj|AP004467.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06K11, TM0002, complete sequence Length = 106023 Score = 83.8 bits (42), Expect = 5e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 8 gaattatctcgacttgttgtcaatcagaacaagaagaaccttttggaaaattggttggca 67 |||||||||||| | ||||| || ||||||||||| || || |||||||||||||||||| Sbjct: 11221 gaattatctcgattggttgtgaaccagaacaagaaaaatctgttggaaaattggttggca 11280 Query: 68 gaagacaagttggagtgcagtgaagagcttggagatct 105 || |||||| | || ||||| || ||||| |||||||| Sbjct: 11281 gaggacaagcttgaatgcagcgaggagctaggagatct 11318 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 167 aaagttgtcgctgcttttgctgagaggagggagtttgacaagatccttatatactcaaag 226 |||||||| || ||||||||||||||||||||||||||||| || || |||||||| ||| Sbjct: 11551 aaagttgttgcagcttttgctgagaggagggagtttgacaaaattctgatatactctaag 11610 Query: 227 caggt 231 ||||| Sbjct: 11611 caggt 11615 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 311 atgatgtcacaaatggaggggggttgcccactggattataataccataactgatctcttc 370 |||||||| ||||||||||| ||| ||||| | ||||| ||||||||||||||||| || Sbjct: 12066 atgatgtctcaaatggagggaggtagcccagttgattacaataccataactgatctgttt 12125 Query: 371 cttcag 376 |||||| Sbjct: 12126 cttcag 12131 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 228 aggttggatacactcctgactacctcttcctc 259 ||||||| ||||| |||||||||||||||||| Sbjct: 11777 aggttgggtacacacctgactacctcttcctc 11808
>gb|AC005102.1| Homo sapiens BAC clone CTA-356E1 from 7, complete sequence Length = 106508 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 29 aatcagaacaagaagaaccttt 50 |||||||||||||||||||||| Sbjct: 45090 aatcagaacaagaagaaccttt 45069
>emb|AL589846.5| Human DNA sequence from clone RP11-199O16 on chromosome 9, complete sequence Length = 44495 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 414 atgttctgaaaccaaatttgga 435 |||||||||||||||||||||| Sbjct: 33101 atgttctgaaaccaaatttgga 33080
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gcagtgaagagcttggagatc 104 ||||||||||||||||||||| Sbjct: 57184 gcagtgaagagcttggagatc 57204
>gb|AC162291.13| Mus musculus chromosome 18, clone RP23-264B14, complete sequence Length = 198736 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 gaaaccaaatttggaagaaca 441 ||||||||||||||||||||| Sbjct: 194721 gaaaccaaatttggaagaaca 194701
>gb|AC102195.14| Mus musculus chromosome 18, clone RP24-430B21, complete sequence Length = 173604 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 gaaaccaaatttggaagaaca 441 ||||||||||||||||||||| Sbjct: 82327 gaaaccaaatttggaagaaca 82307
>gb|AC139939.6| Mus musculus chromosome 1, clone RP23-458O23, complete sequence Length = 175033 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 ttttcttcagaccaggtcttg 465 ||||||||||||||||||||| Sbjct: 29339 ttttcttcagaccaggtcttg 29319
>ref|XM_567589.1| Cryptococcus neoformans var. neoformans JEC21 L-serine ammonia-lyase (CNK00180) partial mRNA Length = 1655 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 gcagtgaagagcttggagatc 104 ||||||||||||||||||||| Sbjct: 705 gcagtgaagagcttggagatc 685
>gb|AC127690.4| Mus musculus BAC clone RP24-215A3 from chromosome 17, complete sequence Length = 187751 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 301 ctttgctctcatgatgtcacaaatg 325 ||||||||||||||||| ||||||| Sbjct: 26275 ctttgctctcatgatgtgacaaatg 26299
>gb|AC152392.6| Mus musculus chromosome 1, clone RP23-300P10, complete sequence Length = 225267 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 ttttcttcagaccaggtcttg 465 ||||||||||||||||||||| Sbjct: 166379 ttttcttcagaccaggtcttg 166359
>emb|CR848813.6| Zebrafish DNA sequence from clone DKEY-260J20 in linkage group 5, complete sequence Length = 206722 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 aagagcttggagatcttgtaa 110 ||||||||||||||||||||| Sbjct: 147675 aagagcttggagatcttgtaa 147655
>emb|CR354436.14| Zebrafish DNA sequence from clone DKEY-269F18 in linkage group 18, complete sequence Length = 181663 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 cctcttcctcctccagaccat 270 ||||||||||||||||||||| Sbjct: 162724 cctcttcctcctccagaccat 162744
>ref|XM_687989.1| PREDICTED: Danio rerio hypothetical protein LOC564660 (LOC564660), mRNA Length = 1276 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 cctcttcctcctccagaccat 270 ||||||||||||||||||||| Sbjct: 778 cctcttcctcctccagaccat 758
>gb|AC019144.9| Homo sapiens BAC clone RP11-733L22 from 2, complete sequence Length = 146004 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 aaaccaaatttggaagaacat 442 ||||||||||||||||||||| Sbjct: 89225 aaaccaaatttggaagaacat 89205
>emb|AL953908.7| Zebrafish DNA sequence from clone CH211-202A12, complete sequence Length = 193129 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 aagagcttggagatcttgtaa 110 ||||||||||||||||||||| Sbjct: 6427 aagagcttggagatcttgtaa 6447
>gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, complete sequence Length = 165190 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 ctttgctctcatgatgtcacaaatg 325 ||||||||||||||||| ||||||| Sbjct: 18473 ctttgctctcatgatgtgacaaatg 18449
>ref|XM_959122.1| Neurospora crassa OR74A hypothetical protein (NCU03289.1) partial mRNA Length = 540 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 gaacaagaagaaccttttggaaaa 57 |||||||||||| ||||||||||| Sbjct: 72 gaacaagaagaagcttttggaaaa 95
>ref|XM_330724.1| Neurospora crassa OR74A hypothetical protein (NCU03289.1) partial mRNA Length = 540 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 gaacaagaagaaccttttggaaaa 57 |||||||||||| ||||||||||| Sbjct: 72 gaacaagaagaagcttttggaaaa 95
>gb|AY196163.1| Solanum tuberosum nematode resistance-like protein (Gro1-12) gene, complete sequence Length = 2285 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 1484 cagaacaagaagaacctttt 1465
>gb|AY196162.1| Solanum tuberosum nematode resistance-like protein (Gro1-3) gene, Gro1-3-P41 allele, complete sequence Length = 6052 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 3026 cagaacaagaagaacctttt 3007
>gb|AY196161.1| Solanum tuberosum nematode resistance-like protein (Gro1-11) gene, Gro1-11-P41 allele, complete sequence Length = 5993 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 4459 cagaacaagaagaacctttt 4440
>gb|AY196160.1| Solanum tuberosum nematode resistance-like protein (Gro1-10) gene, Gro1-10-P41 allele, partial cds Length = 8306 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 4583 cagaacaagaagaacctttt 4564
>gb|AY196159.1| Solanum tuberosum nematode resistance-like protein (Gro1-1) gene, Gro1-1-P41 allele, complete cds Length = 6436 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 2590 cagaacaagaagaacctttt 2571
>gb|AY196158.1| Solanum tuberosum nematode resistance-like protein (Gro1-14) pseudogene, complete sequence Length = 7276 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 3222 cagaacaagaagaacctttt 3203
>gb|AY196157.1| Solanum tuberosum nematode resistance-like protein (Gro1-11) pseudogene, complete sequence Length = 13001 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 8055 cagaacaagaagaacctttt 8036
>gb|AY196156.1| Solanum tuberosum nematode resistance-like protein (Gro1-8) pseudogene, complete sequence Length = 11503 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 7088 cagaacaagaagaacctttt 7069
>gb|AY196155.1| Solanum tuberosum nematode resistance-like protein (Gro1-6) pseudogene, complete sequence Length = 6426 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 3159 cagaacaagaagaacctttt 3140
>gb|AY196154.1| Solanum tuberosum nematode resistance-like protein (Gro1-3) pseudogene, complete sequence Length = 7187 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 3310 cagaacaagaagaacctttt 3291
>gb|AY196153.1| Solanum tuberosum nematode resistance-like protein (Gro1-2) gene, Gro1-2-P40 allele, complete cds Length = 21787 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 15372 cagaacaagaagaacctttt 15353
>gb|AY196152.1| Solanum tuberosum nematode resistance-like protein (Gro1-5) gene, Gro1-5-P40 allele, complete cds Length = 10528 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 4618 cagaacaagaagaacctttt 4599
>gb|AY196151.1| Solanum tuberosum nematode resistance protein (Gro1-4) gene, Gro1-4-P40 allele, complete cds Length = 14664 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 10767 cagaacaagaagaacctttt 10748
>gb|AF189005.5| Homo sapiens chromosome 8 clone CTA-396D5 map q12.1, complete sequence Length = 120719 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 240 ctcctgactacctcttcctcctcc 263 |||||||||||||||| ||||||| Sbjct: 78802 ctcctgactacctctttctcctcc 78779
>emb|AM075231.1| Rosa hybrid cultivar partial brp23 gene for putative TIR-NBS-LRR resistance protein Length = 469 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 219 cagaacaagaagaacctttt 200
>emb|AM075209.1| Rosa hybrid cultivar partial brp1 gene for putative TIR-NBS-LRR resistance protein Length = 616 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 204 cagaacaagaagaacctttt 185
>gb|AC022168.6| Homo sapiens chromosome 16 clone RP11-89D3, complete sequence Length = 177322 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 tgactacctcttcctcctcc 263 |||||||||||||||||||| Sbjct: 46964 tgactacctcttcctcctcc 46945
>ref|XM_662839.1| Cryptosporidium hominis TU502 acid phosphatase (Chro.80016) partial mRNA Length = 1275 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gaagaaccttttggaaaatt 59 |||||||||||||||||||| Sbjct: 268 gaagaaccttttggaaaatt 287
>emb|AL627443.6| Human DNA sequence from clone RP11-459F1 on chromosome 6 Contains a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene, a novel gene, the T gene for T, brachyury homolog (mouse) and a CpG island, complete sequence Length = 164820 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 aggagggagtttgacaagat 210 |||||||||||||||||||| Sbjct: 143703 aggagggagtttgacaagat 143684
>emb|AL354778.6| Human DNA sequence from clone RP5-845C20 on chromosome 1 Contains the 5'end of a variant of the SSBP3 gene for single stranded DNA binding protein 3, complete sequence Length = 37566 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 ctcctgactacctcttcctcctcc 263 ||||||||||||||| |||||||| Sbjct: 7256 ctcctgactacctctccctcctcc 7279
>emb|AL078581.11|HSDJ12G14 Human DNA sequence from clone RP1-12G14 on chromosome 6q24.1-25.2 Contains the 5' end of the PPIL4 gene for peptidylprolyl isomerase (cyclophilin)-like 4 (HDCME13P ), a novel gene (LOC116254), a ribosomal protein S18 (RPS18) pseudogene, the KATNA1 gene for katanin p60 (ATPase-containing) subunit A 1, three novel genes and two CpG islands, complete sequence Length = 102019 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 237 acactcctgactacctcttcctcctcca 264 ||||||| ||| |||||||||||||||| Sbjct: 22070 acactccagacaacctcttcctcctcca 22097
>gb|AF534300.1| Lycopersicon hirsutum clone S3_530 RGA marker sequence Length = 531 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 249 cagaacaagaagaacctttt 230
>emb|AL731827.6| Mouse DNA sequence from clone RP23-109M24 on chromosome 11, complete sequence Length = 115109 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 tttgacaagatccttatata 219 |||||||||||||||||||| Sbjct: 103265 tttgacaagatccttatata 103284
>gb|AC110013.5| Homo sapiens chromosome 8, clone CTA-396D5, complete sequence Length = 120724 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 ctcctgactacctcttcctcctcc 263 |||||||||||||||| ||||||| Sbjct: 41918 ctcctgactacctctttctcctcc 41941
>gb|AC025237.7| Homo sapiens BAC clone RP11-414D7 from 4, complete sequence Length = 61502 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 aagagcttggagatcttgtaaaga 113 |||||||||||||| ||||||||| Sbjct: 5908 aagagcttggagatattgtaaaga 5885
>gb|AC007596.7| Homo sapiens chromosome 16 clone RP11-116B6, complete sequence Length = 186210 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 tgactacctcttcctcctcc 263 |||||||||||||||||||| Sbjct: 73955 tgactacctcttcctcctcc 73936
>gb|AC036144.7| Homo sapiens chromosome 8, clone RP11-293L6, complete sequence Length = 127270 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 aagaacatgcttttcttcag 454 |||||||||||||||||||| Sbjct: 11359 aagaacatgcttttcttcag 11340
>ref|XM_694607.1| PREDICTED: Danio rerio similar to Rapgef2 protein (LOC571055), mRNA Length = 1251 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 agaccaggtcttggagatca 472 |||||||||||||||||||| Sbjct: 879 agaccaggtcttggagatca 898
>gb|AC016031.6| Homo sapiens, clone RP11-12J8, complete sequence Length = 139690 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 aagaacatgcttttcttcag 454 |||||||||||||||||||| Sbjct: 73476 aagaacatgcttttcttcag 73457
>gb|AF404459.1|AF404459 Lycopersicon esculentum isolate Q145 nucleotide binding region of resistance-like gene, partial sequence Length = 678 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 243 cagaacaagaagaacctttt 224
>gb|AF404416.1|AF404416 Lycopersicon esculentum isolate Q2 nucleotide binding region of resistance-like gene, partial sequence Length = 654 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 219 cagaacaagaagaacctttt 200
>gb|AC148918.3| Medicago truncatula chromosome 2 BAC clone mth2-44o11, complete sequence Length = 126437 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 74489 cagaacaagaagaacctttt 74470
>gb|AY607729.1| Fragaria chiloensis clone CHILO-19 putative disease resistance gene analog NBS-LRR pseudogene, partial sequence Length = 510 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 240 cagaacaagaagaacctttt 221
>gb|AY607728.1| Fragaria chiloensis clone CHILO-15 putative disease resistance gene analog NBS-LRR gene, partial cds Length = 510 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 240 cagaacaagaagaacctttt 221
>gb|AY607727.1| Fragaria chiloensis clone CHILO-7 putative disease resistance gene analog NBS-LRR gene, partial cds Length = 510 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 240 cagaacaagaagaacctttt 221
>gb|AY607725.1| Fragaria vesca clone VES-9 putative disease resistance gene analog NBS-LRR pseudogene, partial sequence Length = 510 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 240 cagaacaagaagaacctttt 221
>gb|AY607721.1| Fragaria x ananassa clone GAV-1 putative disease resistance gene analog NBS-LRR gene, partial cds Length = 510 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 240 cagaacaagaagaacctttt 221
>gb|AY607717.1| Fragaria x ananassa clone OSO-2 putative disease resistance gene analog NBS-LRR gene, partial cds Length = 510 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 240 cagaacaagaagaacctttt 221
>gb|AY607715.1| Fragaria x ananassa clone CAM-7 putative disease resistance gene analog NBS-LRR gene, partial cds Length = 510 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 240 cagaacaagaagaacctttt 221
>gb|AY607714.1| Fragaria x ananassa clone SCH-10 putative disease resistance gene analog NBS-LRR gene, partial cds Length = 510 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 240 cagaacaagaagaacctttt 221
>gb|AY607710.1| Fragaria x ananassa clone US-9 putative disease resistance gene analog NBS-LRR gene, partial cds Length = 510 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 240 cagaacaagaagaacctttt 221
>gb|AY607709.1| Fragaria x ananassa clone US-8 putative disease resistance gene analog NBS-LRR gene, partial cds Length = 510 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 240 cagaacaagaagaacctttt 221
>gb|AC102372.8| Mus musculus chromosome 5, clone RP23-262J12, complete sequence Length = 212548 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cctgactacctcttcctcct 261 |||||||||||||||||||| Sbjct: 139048 cctgactacctcttcctcct 139067
>gb|AC091947.4| Homo sapiens chromosome 5 clone RP11-367F9, complete sequence Length = 170063 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 418 tctgaaaccaaatttggaagaaca 441 |||||||||||| ||||||||||| Sbjct: 167523 tctgaaaccaaagttggaagaaca 167546
>gb|AC016595.4| Homo sapiens chromosome 5 clone CTD-2012M11, complete sequence Length = 131484 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 418 tctgaaaccaaatttggaagaaca 441 |||||||||||| ||||||||||| Sbjct: 19148 tctgaaaccaaagttggaagaaca 19171
>gb|AC113061.9| Mus musculus chromosome 14, clone RP23-255H22, complete sequence Length = 190623 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 aaccttttggaaaattggtt 63 |||||||||||||||||||| Sbjct: 161584 aaccttttggaaaattggtt 161603
>gb|U60081.1|STU60081 Solanum tuberosum disease resistance homolog (St334) gene, partial cds Length = 465 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 220 cagaacaagaagaacctttt 201
>gb|U60080.1|STU60080 Solanum tuberosum disease resistance homolog (St332) gene, partial cds Length = 465 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cagaacaagaagaacctttt 51 |||||||||||||||||||| Sbjct: 220 cagaacaagaagaacctttt 201
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153064 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ggtggacaatgatcttgcgc 134 |||||||||||||||||||| Sbjct: 132511 ggtggacaatgatcttgcgc 132530
>gb|AC131724.4| Mus musculus BAC clone RP23-129E9 from 19, complete sequence Length = 225611 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aaaccaaatttggaagaaca 441 |||||||||||||||||||| Sbjct: 43086 aaaccaaatttggaagaaca 43067
>gb|U18910.1|HSU18910 Human homeobox protein pseudogene mRNA, clone TFB1 1C Length = 405 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ttctgaaaccaaatttggaa 436 |||||||||||||||||||| Sbjct: 152 ttctgaaaccaaatttggaa 133
>emb|AL732503.8| Mouse DNA sequence from clone RP23-28O9 on chromosome 4, complete sequence Length = 148526 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 tctcttccttcagagaaata 383 |||||||||||||||||||| Sbjct: 29223 tctcttccttcagagaaata 29204 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,994,570 Number of Sequences: 3902068 Number of extensions: 5994570 Number of successful extensions: 168437 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 167913 Number of HSP's gapped (non-prelim): 524 length of query: 482 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 460 effective length of database: 17,147,199,772 effective search space: 7887711895120 effective search space used: 7887711895120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)