ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl27a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complet... 410 e-111
2gb|AF459085.1| Hordeum vulgare SNF2P (Snf2P) gene, complete cds 402 e-109
3gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 347 2e-92
4gb|AF459087.1| Oryza sativa (japonica cultivar-group) clone C121... 115 1e-22
5dbj|AK066228.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 109 6e-21
7gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare str... 109 6e-21
8gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare str... 109 6e-21
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 109 6e-21
10gb|AF459086.1| Oryza sativa (japonica cultivar-group) clone BAC ... 109 6e-21
11gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence 109 6e-21
12gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 52 0.001
13ref|NM_210862.1| Eremothecium gossypii AFL040Wp (AFL040W), mRNA 52 0.001
14gb|AE015451.1| Pseudomonas putida KT2440 complete genome 52 0.001
15emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 48 0.020
16ref|XM_781983.1| PREDICTED: Strongylocentrotus purpuratus simila... 48 0.020
17gb|CP000110.1| Synechococcus sp. CC9605, complete genome 46 0.081
18ref|NM_197164.1| Oryza sativa (japonica cultivar-group) spore co... 46 0.081
19ref|NM_195737.1| Oryza sativa (japonica cultivar-group) hypothet... 46 0.081
20gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.081
21gb|AC092489.4| Oryza sativa chromosome 10 BAC OSJNBa0066I08 geno... 46 0.081
22gb|AC099774.6| Oryza sativa chromosome 10 BAC OSJNBa0073L20 geno... 46 0.081
23gb|AC091749.8| Oryza sativa chromosome 10 BAC OSJNBb0008A05 geno... 46 0.081
24dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.081
25dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.081
26dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.081
27dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 46 0.081
28gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.081
29gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.081
30gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.081
31emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa... 46 0.081
32dbj|AB070950.1| Streptomyces avermitilis peptide-1 biosynthetic ... 46 0.081
33ref|XM_546747.2| PREDICTED: Canis familiaris similar to chromodo... 44 0.32
34gb|AY061650.1| Toxoplasma gondii Snf2-related chromatin remodeli... 44 0.32
35gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.32
36dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
37dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
38dbj|AK109791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.32
39emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephal... 44 0.32
40gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 1.3
41ref|XM_512384.1| PREDICTED: Pan troglodytes similar to SWI/SNF-r... 42 1.3
42ref|XM_476689.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
43gb|AY234384.1|AY234384S1 Rubrivivax gelatinosus strain S1 5' reg... 42 1.3
44gb|BC079560.1| Mus musculus SWI/SNF related, matrix associated, ... 42 1.3
45ref|NM_003072.2| Homo sapiens SWI/SNF related, matrix associated... 42 1.3
46gb|AC161371.4| Mus musculus BAC clone RP23-402N3 from chromosome... 42 1.3
47gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 42 1.3
48ref|XM_787571.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.3
49ref|XM_777562.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.3
50emb|X91637.1|GGBRG1PRT G.gallus mRNA for BRG1 protein 42 1.3
51ref|NM_011417.2| Mus musculus SWI/SNF related, matrix associated... 42 1.3
52gb|BC060229.1| Mus musculus SWI/SNF related, matrix associated, ... 42 1.3
53dbj|AK141517.1| Mus musculus 12 days embryo spinal cord cDNA, RI... 42 1.3
54dbj|AK147285.1| Mus musculus 14 days pregnant adult female place... 42 1.3
55dbj|AK160825.1| Mus musculus 10 days embryo whole body cDNA, RIK... 42 1.3
56dbj|AK166837.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f... 42 1.3
57gb|S68108.1| brg1=brahma homolog [mice, embryo, erythroleukemia ... 42 1.3
58emb|CR386792.1| Gallus gallus finished cDNA, clone ChEST910a3 42 1.3
59dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
60gb|AF254822.1|AF254822 Homo sapiens SMARCA4 isoform (SMARCA4) ge... 42 1.3
61dbj|AB056583.1| Streptomyces griseus epoA, ORF1, ORF2 genes for ... 42 1.3
62gb|AC011442.5|AC011442 Homo sapiens chromosome 19 clone CTC-215O... 42 1.3
63ref|NM_205059.1| Gallus gallus BRG1 protein (BRG1), mRNA 42 1.3
64ref|XM_343358.2| PREDICTED: Rattus norvegicus SWI/SNF related, m... 42 1.3
65dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
66dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
67dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.3
68dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
69dbj|AK106452.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
70dbj|AK099405.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
71gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosy... 42 1.3
72emb|AJ504723.1|RNO504723 Rattus norvegicus partial mRNA for brah... 42 1.3
73dbj|D26156.1|HUMHSNF2B Homo sapiens mRNA for transcriptional act... 42 1.3
74dbj|AB209313.1| Homo sapiens mRNA for SWI/SNF-related matrix-ass... 42 1.3
75gb|U29175.1|HSU29175 Human transcriptional activator (BRG1) mRNA... 42 1.3
76dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
77gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 5.0
78ref|XM_479497.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.0
79ref|NM_212716.1| Danio rerio SWI/SNF related, matrix associated,... 40 5.0
80gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 40 5.0
81gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
82ref|XM_417313.1| PREDICTED: Gallus gallus similar to chromodomai... 40 5.0
83gb|AE009307.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 5.0
84gb|AE008307.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 5.0
85gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole b... 40 5.0
86gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 5.0
87emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 5.0
88emb|CR391913.7| Zebrafish DNA sequence from clone DKEY-118P6 in ... 40 5.0
89gb|AY349011.1| Burkholderia cepacia phage Bcep22, complete genome 40 5.0
90gb|AC144400.2| Lemur catta clone LBNL2-87E20, complete sequence 40 5.0
91gb|CP000088.1| Thermobifida fusca YX, complete genome 40 5.0
92gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 5.0
93emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete ... 40 5.0
94gb|BC060676.1| Danio rerio SWI/SNF related, matrix associated, a... 40 5.0
95gb|AE011887.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 5.0
96gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.0
97ref|XM_697477.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 5.0
98ref|XM_683175.1| PREDICTED: Danio rerio similar to SWI/SNF-relat... 40 5.0
99ref|XM_687842.1| PREDICTED: Danio rerio similar to Phasmid Socke... 40 5.0
100emb|BX934592.1| Gallus gallus finished cDNA, clone ChEST93d1 40 5.0
101ref|XM_227510.3| PREDICTED: Rattus norvegicus chromodomain helic... 40 5.0
102dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.0
103dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.0
104dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
105dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
106dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
107ref|XM_320523.2| Anopheles gambiae str. PEST ENSANGP00000008665 ... 40 5.0
108dbj|AK101251.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
109emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.0
110emb|AL928727.8| Zebrafish DNA sequence from clone CH211-130P8 in... 40 5.0
111gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.0
112gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 5.0
113emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC... 40 5.0
114dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 5.0
115gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
116dbj|AB045781.1| Pratylenchus penetrans Pp-eng-2 mRNA for beta-1,... 40 5.0 
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence
          Length = 114996

 Score =  410 bits (207), Expect = e-111
 Identities = 213/215 (99%)
 Strand = Plus / Plus

                                                                         
Query: 31    cacgagttcccgccgctcctccctatggcggccaccgcctacgagcgccgcctgctcgcc 90
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 68142 cacgagttcccgccgctcctccccatggcggccaccgcctacgagcgccgcctgctcgcc 68201

                                                                         
Query: 91    gccgccgacctcgtcctctccgcagacgggaagtcccagctcccccgcctctcctccgcc 150
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 68202 gccgccgacctcgtcctctccgccgacgggaagtcccagctcccccgcctctcctccgcc 68261

                                                                         
Query: 151   gacctcggggtcactgccgacctcaagccgcaccagctcgacggcgtccactggctcatc 210
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68262 gacctcggggtcactgccgacctcaagccgcaccagctcgacggcgtccactggctcatc 68321

                                                
Query: 211   cgccgctaccacctcggcgtcaacgtcctgctcgg 245
             |||||||||||||||||||||||||||||||||||
Sbjct: 68322 cgccgctaccacctcggcgtcaacgtcctgctcgg 68356



 Score =  153 bits (77), Expect = 5e-34
 Identities = 80/81 (98%)
 Strand = Plus / Plus

                                                                         
Query: 251   agatggggctggggaagaccctgcaggcaatttctctgctgagctacctgaagatcaaat 310
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68666 agatggggctggggaagaccctgcaggcaatttctctgctgagctacctgaagatcaaat 68725

                                  
Query: 311   ccatcgcccccaggccgttcc 331
             ||||||||||| |||||||||
Sbjct: 68726 ccatcgcccccgggccgttcc 68746



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 42/42 (100%)
 Strand = Plus / Plus

                                                       
Query: 332   tggtgttatgccctctgagcgtgacggatggctggttgtcgg 373
             ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68849 tggtgttatgccctctgagcgtgacggatggctggttgtcgg 68890
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>gb|AF459085.1| Hordeum vulgare SNF2P (Snf2P) gene, complete cds
          Length = 7963

 Score =  402 bits (203), Expect = e-109
 Identities = 212/215 (98%)
 Strand = Plus / Plus

                                                                       
Query: 31  cacgagttcccgccgctcctccctatggcggccaccgcctacgagcgccgcctgctcgcc 90
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 92  cacgagttcccgccgctcctccccatggcggccaccgcctacgagcgccgcctgctcgcc 151

                                                                       
Query: 91  gccgccgacctcgtcctctccgcagacgggaagtcccagctcccccgcctctcctccgcc 150
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 152 gccgccgacctcgtcctctccgccgacgggaagtcccagctcccccgcctctcctccgcc 211

                                                                       
Query: 151 gacctcggggtcactgccgacctcaagccgcaccagctcgacggcgtccactggctcatc 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gacctcggggtcactgccgacctcaagccgcaccagctcgacggcgtccactggctcatc 271

                                              
Query: 211 cgccgctaccacctcggcgtcaacgtcctgctcgg 245
           ||||||||||||||||| |||||||||||||||||
Sbjct: 272 cgccgctaccacctcggagtcaacgtcctgctcgg 306



 Score =  161 bits (81), Expect = 2e-36
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                       
Query: 251 agatggggctggggaagaccctgcaggcaatttctctgctgagctacctgaagatcaaat 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 agatggggctggggaagaccctgcaggcaatttctctgctgagctacctgaagatcaaat 675

                                
Query: 311 ccatcgcccccaggccgttcc 331
           |||||||||||||||||||||
Sbjct: 676 ccatcgcccccaggccgttcc 696



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 42/42 (100%)
 Strand = Plus / Plus

                                                     
Query: 332 tggtgttatgccctctgagcgtgacggatggctggttgtcgg 373
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tggtgttatgccctctgagcgtgacggatggctggttgtcgg 840
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>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score =  347 bits (175), Expect = 2e-92
 Identities = 205/215 (95%)
 Strand = Plus / Plus

                                                                          
Query: 31     cacgagttcccgccgctcctccctatggcggccaccgcctacgagcgccgcctgctcgcc 90
              |||||||||||||| ||| |||| |||||||| |||||||||||||||||||||||||||
Sbjct: 345907 cacgagttcccgcccctcttccccatggcggcgaccgcctacgagcgccgcctgctcgcc 345966

                                                                          
Query: 91     gccgccgacctcgtcctctccgcagacgggaagtcccagctcccccgcctctcctccgcc 150
              ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 345967 gccgccgacctcgtcctctccgccgacggcaagtcccagctcccccgcctctcctccgcc 346026

                                                                          
Query: 151    gacctcggggtcactgccgacctcaagccgcaccagctcgacggcgtccactggctcatc 210
              |||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 346027 gacctcggcgtcacggccgacctcaagccgcaccagctggacggcgtcgactggctcatc 346086

                                                 
Query: 211    cgccgctaccacctcggcgtcaacgtcctgctcgg 245
              |||||||||||||||||||||||||||||||||||
Sbjct: 346087 cgccgctaccacctcggcgtcaacgtcctgctcgg 346121



 Score =  137 bits (69), Expect = 3e-29
 Identities = 78/81 (96%)
 Strand = Plus / Plus

                                                                          
Query: 251    agatggggctggggaagaccctgcaggcaatttctctgctgagctacctgaagatcaaat 310
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 346420 agatggggctggggaagaccctgcaggcgatttctctgctgagctacctgaagatcaaat 346479

                                   
Query: 311    ccatcgcccccaggccgttcc 331
              ||||||||||| | |||||||
Sbjct: 346480 ccatcgcccccggaccgttcc 346500



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                        
Query: 332    tggtgttatgccctctgagcgtgacggatggctggttgtcgg 373
              |||||||||||||||| || ||||||||||||||||||||||
Sbjct: 346589 tggtgttatgccctctaagtgtgacggatggctggttgtcgg 346630
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>gb|AF459087.1| Oryza sativa (japonica cultivar-group) clone C12105 SNF2P (Snf2P)
           precursor RNA, complete cds
          Length = 3182

 Score =  115 bits (58), Expect = 1e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                       
Query: 155 tcggggtcactgccgacctcaagccgcaccagctcgacggcgtccactggctcatccgcc 214
           |||| ||||| ||||| ||||||||||||||| |||| ||||||   |||||||||||||
Sbjct: 117 tcggagtcacggccgagctcaagccgcaccaggtcgatggcgtcgcgtggctcatccgcc 176

                                                 
Query: 215 gctaccacctcggcgtcaacgtcctgctcggcgacgag 252
           ||||||| ||||||||||||||||||||||| ||||||
Sbjct: 177 gctaccaactcggcgtcaacgtcctgctcggtgacgag 214



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 73  gagcgccgcctgctcgccgccgccgacctcgtcctctccgc 113
           ||||||||||| ||||||||||||  |||| ||||||||||
Sbjct: 32  gagcgccgcctcctcgccgccgcctccctcctcctctccgc 72
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>dbj|AK066228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058B09, full
           insert sequence
          Length = 3129

 Score =  115 bits (58), Expect = 1e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                       
Query: 155 tcggggtcactgccgacctcaagccgcaccagctcgacggcgtccactggctcatccgcc 214
           |||| ||||| ||||| ||||||||||||||| |||| ||||||   |||||||||||||
Sbjct: 91  tcggagtcacggccgagctcaagccgcaccaggtcgatggcgtcgcgtggctcatccgcc 150

                                                 
Query: 215 gctaccacctcggcgtcaacgtcctgctcggcgacgag 252
           ||||||| ||||||||||||||||||||||| ||||||
Sbjct: 151 gctaccaactcggcgtcaacgtcctgctcggtgacgag 188



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 73  gagcgccgcctgctcgccgccgccgacctcgtcctctccgc 113
           ||||||||||| ||||||||||||  |||| ||||||||||
Sbjct: 6   gagcgccgcctcctcgccgccgcctccctcctcctctccgc 46
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  109 bits (55), Expect = 6e-21
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                          
Query: 155    tcggggtcactgccgacctcaagccgcaccagctcgacggcgtccactggctcatccgcc 214
              |||| ||||| ||||| ||||||||||||||| |||| ||||||   |||||||||||||
Sbjct: 110966 tcggagtcacggccgagctcaagccgcaccaggtcgatggcgtcgcgtggctcatccgcc 110907

                                             
Query: 215    gctaccacctcggcgtcaacgtcctgctcgg 245
              ||||||| |||||||||||||||||||||||
Sbjct: 110906 gctaccaactcggcgtcaacgtcctgctcgg 110876



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 73     gagcgccgcctgctcgccgccgccgacctcgtcctctccgc 113
              ||||||||||| ||||||||||||  |||| ||||||||||
Sbjct: 111051 gagcgccgcctcctcgccgccgcctccctcctcctctccgc 111011



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 86      tcgccgccgccgacctcgtcctctcc 111
               ||||||||||||||||| ||||||||
Sbjct: 3459780 tcgccgccgccgacctcatcctctcc 3459755
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>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAb0079B22, from chromosome 3, complete sequence
          Length = 156933

 Score =  109 bits (55), Expect = 6e-21
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                         
Query: 155   tcggggtcactgccgacctcaagccgcaccagctcgacggcgtccactggctcatccgcc 214
             |||| ||||| ||||| ||||||||||||||| |||| ||||||   |||||||||||||
Sbjct: 44966 tcggagtcacggccgagctcaagccgcaccaggtcgatggcgtcgcgtggctcatccgcc 44907

                                            
Query: 215   gctaccacctcggcgtcaacgtcctgctcgg 245
             ||||||| |||||||||||||||||||||||
Sbjct: 44906 gctaccaactcggcgtcaacgtcctgctcgg 44876



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 73    gagcgccgcctgctcgccgccgccgacctcgtcctctccgc 113
             ||||||||||| ||||||||||||  |||| ||||||||||
Sbjct: 45051 gagcgccgcctcctcgccgccgcctccctcctcctctccgc 45011
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>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0079B22, from chromosome 3, complete sequence
          Length = 125217

 Score =  109 bits (55), Expect = 6e-21
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                         
Query: 155   tcggggtcactgccgacctcaagccgcaccagctcgacggcgtccactggctcatccgcc 214
             |||| ||||| ||||| ||||||||||||||| |||| ||||||   |||||||||||||
Sbjct: 14252 tcggagtcacggccgagctcaagccgcaccaggtcgatggcgtcgcgtggctcatccgcc 14311

                                            
Query: 215   gctaccacctcggcgtcaacgtcctgctcgg 245
             ||||||| |||||||||||||||||||||||
Sbjct: 14312 gctaccaactcggcgtcaacgtcctgctcgg 14342



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 73    gagcgccgcctgctcgccgccgccgacctcgtcctctccgc 113
             ||||||||||| ||||||||||||  |||| ||||||||||
Sbjct: 14167 gagcgccgcctcctcgccgccgcctccctcctcctctccgc 14207
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score =  109 bits (55), Expect = 6e-21
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                          
Query: 155    tcggggtcactgccgacctcaagccgcaccagctcgacggcgtccactggctcatccgcc 214
              |||| ||||| ||||| ||||||||||||||| |||| ||||||   |||||||||||||
Sbjct: 110966 tcggagtcacggccgagctcaagccgcaccaggtcgatggcgtcgcgtggctcatccgcc 110907

                                             
Query: 215    gctaccacctcggcgtcaacgtcctgctcgg 245
              ||||||| |||||||||||||||||||||||
Sbjct: 110906 gctaccaactcggcgtcaacgtcctgctcgg 110876



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 73     gagcgccgcctgctcgccgccgccgacctcgtcctctccgc 113
              ||||||||||| ||||||||||||  |||| ||||||||||
Sbjct: 111051 gagcgccgcctcctcgccgccgcctccctcctcctctccgc 111011



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 86      tcgccgccgccgacctcgtcctctcc 111
               ||||||||||||||||| ||||||||
Sbjct: 3459891 tcgccgccgccgacctcatcctctcc 3459866
to top
>gb|AF459086.1| Oryza sativa (japonica cultivar-group) clone BAC a0049F05 SNF2P
            (Snf2P) gene, complete cds
          Length = 8353

 Score =  109 bits (55), Expect = 6e-21
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                        
Query: 155  tcggggtcactgccgacctcaagccgcaccagctcgacggcgtccactggctcatccgcc 214
            |||| ||||| ||||| ||||||||||||||| |||| ||||||   |||||||||||||
Sbjct: 1107 tcggagtcacggccgagctcaagccgcaccaggtcgatggcgtcgcgtggctcatccgcc 1166

                                           
Query: 215  gctaccacctcggcgtcaacgtcctgctcgg 245
            ||||||| |||||||||||||||||||||||
Sbjct: 1167 gctaccaactcggcgtcaacgtcctgctcgg 1197



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 73   gagcgccgcctgctcgccgccgccgacctcgtcctctccgc 113
            ||||||||||| ||||||||||||  |||| ||||||||||
Sbjct: 1022 gagcgccgcctcctcgccgccgcctccctcctcctctccgc 1062
to top
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
          Length = 162241

 Score =  109 bits (55), Expect = 6e-21
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                          
Query: 155    tcggggtcactgccgacctcaagccgcaccagctcgacggcgtccactggctcatccgcc 214
              |||| ||||| ||||| ||||||||||||||| |||| ||||||   |||||||||||||
Sbjct: 151652 tcggagtcacggccgagctcaagccgcaccaggtcgatggcgtcgcgtggctcatccgcc 151711

                                             
Query: 215    gctaccacctcggcgtcaacgtcctgctcgg 245
              ||||||| |||||||||||||||||||||||
Sbjct: 151712 gctaccaactcggcgtcaacgtcctgctcgg 151742



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 73     gagcgccgcctgctcgccgccgccgacctcgtcctctccgc 113
              ||||||||||| ||||||||||||  |||| ||||||||||
Sbjct: 151567 gagcgccgcctcctcgccgccgcctccctcctcctctccgc 151607
to top
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
              complete sequence
          Length = 1813164

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                            
Query: 247    gacgagatggggctggggaagaccctgcag 276
              ||||||||||||||||||||||| ||||||
Sbjct: 363666 gacgagatggggctggggaagactctgcag 363695
to top
>ref|NM_210862.1| Eremothecium gossypii AFL040Wp (AFL040W), mRNA
          Length = 3261

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 247 gacgagatggggctggggaagaccctgcag 276
           ||||||||||||||||||||||| ||||||
Sbjct: 505 gacgagatggggctggggaagactctgcag 534
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                     
Query: 241     ctcggcgacgagatggggctggggaagaccctgcaggc 278
               ||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 2449108 ctcggcgacgacatgggcctgggcaagaccctgcaggc 2449071
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 63      caccgcctacgagcgccgcctgct 86
               ||||||||||||||||||||||||
Sbjct: 3014808 caccgcctacgagcgccgcctgct 3014831
to top
>ref|XM_781983.1| PREDICTED: Strongylocentrotus purpuratus similar to SNF2 histone
            linker PHD RING helicase (LOC582006), mRNA
          Length = 2202

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 246  cgacgagatggggctggggaagac 269
            ||||||||||||||||||||||||
Sbjct: 1233 cgacgagatggggctggggaagac 1256
to top
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 250   gagatggggctggggaagaccct 272
             |||||||||||||||||||||||
Sbjct: 37360 gagatggggctggggaagaccct 37382
to top
>ref|NM_197164.1| Oryza sativa (japonica cultivar-group) spore coat protein-like
           protein (OSJNBa0066I08.5), mRNA
          Length = 678

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 83  tgctcgccgccgccgacctcgtc 105
           |||||||||||||||||||||||
Sbjct: 59  tgctcgccgccgccgacctcgtc 37
to top
>ref|NM_195737.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0073L20.24), mRNA
          Length = 1089

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 83  tgctcgccgccgccgacctcgtc 105
           |||||||||||||||||||||||
Sbjct: 895 tgctcgccgccgccgacctcgtc 917
to top
>gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0033D06,
              complete sequence
          Length = 142659

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 83     tgctcgccgccgccgacctcgtc 105
              |||||||||||||||||||||||
Sbjct: 101651 tgctcgccgccgccgacctcgtc 101629
to top
>gb|AC092489.4| Oryza sativa chromosome 10 BAC OSJNBa0066I08 genomic sequence, complete
             sequence
          Length = 25375

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 83    tgctcgccgccgccgacctcgtc 105
             |||||||||||||||||||||||
Sbjct: 18612 tgctcgccgccgccgacctcgtc 18634
to top
>gb|AC099774.6| Oryza sativa chromosome 10 BAC OSJNBa0073L20 genomic sequence, complete
              sequence
          Length = 147651

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 83     tgctcgccgccgccgacctcgtc 105
              |||||||||||||||||||||||
Sbjct: 144979 tgctcgccgccgccgacctcgtc 144957
to top
>gb|AC091749.8| Oryza sativa chromosome 10 BAC OSJNBb0008A05 genomic sequence,
            complete sequence
          Length = 150465

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 83   tgctcgccgccgccgacctcgtc 105
            |||||||||||||||||||||||
Sbjct: 9410 tgctcgccgccgccgacctcgtc 9388
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 83     tgctcgccgccgccgacctcgtc 105
              |||||||||||||||||||||||
Sbjct: 425102 tgctcgccgccgccgacctcgtc 425080
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 83       tgctcgccgccgccgacctcgtc 105
                |||||||||||||||||||||||
Sbjct: 18368021 tgctcgccgccgccgacctcgtc 18368043



 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 83      tgctcgccgccgccgacctcgtc 105
               |||||||||||||||||||||||
Sbjct: 8754338 tgctcgccgccgccgacctcgtc 8754316
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 83      tgctcgccgccgccgacctcgtc 105
               |||||||||||||||||||||||
Sbjct: 1788922 tgctcgccgccgccgacctcgtc 1788900



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 83       tgctcgccgccgccgacctc 102
                ||||||||||||||||||||
Sbjct: 29527135 tgctcgccgccgccgacctc 29527116
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 239     tgctcggcgacgagatggggctggggaagac 269
               |||||||||||||||||||||| || |||||
Sbjct: 3976068 tgctcggcgacgagatggggctcggcaagac 3976038



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 81      cctgctcgccgccgccgacc 100
               ||||||||||||||||||||
Sbjct: 8452043 cctgctcgccgccgccgacc 8452062
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 75      gcgccgcctgctcgccgccgccg 97
               |||||||||||||||||||||||
Sbjct: 4223340 gcgccgcctgctcgccgccgccg 4223318



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 89      ccgccgccgacctcgtcctctccgc 113
               |||||||||||||||||||| ||||
Sbjct: 4642886 ccgccgccgacctcgtcctcgccgc 4642910



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     gctcgccgccgccgacctcg 103
              ||||||||||||||||||||
Sbjct: 892996 gctcgccgccgccgacctcg 893015
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 83       tgctcgccgccgccgacctcgtc 105
                |||||||||||||||||||||||
Sbjct: 18378074 tgctcgccgccgccgacctcgtc 18378096



 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 83      tgctcgccgccgccgacctcgtc 105
               |||||||||||||||||||||||
Sbjct: 8759477 tgctcgccgccgccgacctcgtc 8759455
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 83     tgctcgccgccgccgacctcgtc 105
              |||||||||||||||||||||||
Sbjct: 425102 tgctcgccgccgccgacctcgtc 425080
to top
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 164143

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 83     tgctcgccgccgccgacctcgtc 105
              |||||||||||||||||||||||
Sbjct: 132420 tgctcgccgccgccgacctcgtc 132398
to top
>dbj|AB070950.1| Streptomyces avermitilis peptide-1 biosynthetic gene cluster
          Length = 21391

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 239   tgctcggcgacgagatggggctggggaagac 269
             |||||||||||||||||||||| || |||||
Sbjct: 20124 tgctcggcgacgagatggggctcggcaagac 20154
to top
>ref|XM_546747.2| PREDICTED: Canis familiaris similar to chromodomain helicase DNA
            binding protein 5 (LOC489627), mRNA
          Length = 5985

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 247  gacgagatggggctggggaagaccctgcag 276
            ||||||||||||||||| |||||| |||||
Sbjct: 2308 gacgagatggggctgggcaagaccgtgcag 2337
to top
>gb|AY061650.1| Toxoplasma gondii Snf2-related chromatin remodeling factor SRCAP
            (SRCAP) mRNA, complete cds
          Length = 8775

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 247  gacgagatggggctggggaagaccctgcag 276
            ||||| ||||||||||||||||| ||||||
Sbjct: 3826 gacgaaatggggctggggaagactctgcag 3855
to top
>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12,
             complete sequence
          Length = 103330

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 86    tcgccgccgccgacctcgtcctctcc 111
             ||||||||||||||||| ||||||||
Sbjct: 50595 tcgccgccgccgacctcatcctctcc 50620
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 75      gcgccgcctgctcgccgccgccgacc 100
               |||||||||||||||||||| |||||
Sbjct: 5036281 gcgccgcctgctcgccgccgtcgacc 5036306



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 75      gcgccgcctgctcgccgccgc 95
               |||||||||||||||||||||
Sbjct: 3184206 gcgccgcctgctcgccgccgc 3184186



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 87       cgccgccgccgacctcgtcc 106
                ||||||||||||||||||||
Sbjct: 28506074 cgccgccgccgacctcgtcc 28506055



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 247      gacgagatggggctggggaagacc 270
                |||||||||||| |||||||||||
Sbjct: 19485847 gacgagatggggatggggaagacc 19485870
to top
>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0049I08
          Length = 144379

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 75    gcgccgcctgctcgccgccgccgacc 100
             |||||||||||||||||||| |||||
Sbjct: 77970 gcgccgcctgctcgccgccgtcgacc 77995
to top
>dbj|AK109791.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D09, full
           insert sequence
          Length = 1855

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 75  gcgccgcctgctcgccgccgccgacc 100
           |||||||||||||||||||| |||||
Sbjct: 258 gcgccgcctgctcgccgccgtcgacc 283
to top
>emb|AL590449.1|CNS07EGG chromosome X of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 262797

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 247    gacgagatggggctggggaagaccctgcag 276
              |||||||||||||| |||||||| ||||||
Sbjct: 182664 gacgagatggggcttgggaagacgctgcag 182635
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 166     gccgacctcaagccgcaccag 186
               |||||||||||||||||||||
Sbjct: 2235381 gccgacctcaagccgcaccag 2235401
to top
>ref|XM_512384.1| PREDICTED: Pan troglodytes similar to SWI/SNF-related
            matrix-associated actin-dependent regulator of chromatin
            a4; SNF2-like 4; global transcription activator
            homologous sequence; sucrose nonfermenting-like 4;
            mitotic growth and transcription activator;
            BRM/SWI2-related gene... (LOC455720), mRNA
          Length = 4602

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 246  cgacgagatggggctggggaagacc 270
            |||||||||||| ||||||||||||
Sbjct: 2619 cgacgagatgggcctggggaagacc 2643
to top
>ref|XM_476689.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1652

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 75  gcgccgcctgctcgccgccgc 95
           |||||||||||||||||||||
Sbjct: 590 gcgccgcctgctcgccgccgc 610
to top
>gb|AY234384.1|AY234384S1 Rubrivivax gelatinosus strain S1 5' region photosynthesis gene
            cluster, partial sequence
          Length = 24637

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 75   gcgccgcctgctcgccgccgccgac 99
            |||||||||| ||||||||||||||
Sbjct: 1789 gcgccgcctggtcgccgccgccgac 1813
to top
>gb|BC079560.1| Mus musculus SWI/SNF related, matrix associated, actin dependent
            regulator of chromatin, subfamily a, member 4, mRNA (cDNA
            clone MGC:90778 IMAGE:30533489), complete cds
          Length = 5521

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 250  gagatggggctggggaagacc 270
            |||||||||||||||||||||
Sbjct: 2598 gagatggggctggggaagacc 2618
to top
>ref|NM_003072.2| Homo sapiens SWI/SNF related, matrix associated, actin dependent
            regulator of chromatin, subfamily a, member 4 (SMARCA4),
            mRNA
          Length = 5681

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 246  cgacgagatggggctggggaagacc 270
            |||||||||||| ||||||||||||
Sbjct: 2610 cgacgagatgggcctggggaagacc 2634
to top
>gb|AC161371.4| Mus musculus BAC clone RP23-402N3 from chromosome 9, complete sequence
          Length = 203708

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 250    gagatggggctggggaagacc 270
              |||||||||||||||||||||
Sbjct: 148157 gagatggggctggggaagacc 148137
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 79      cgcctgctcgccgccgccgac 99
               |||||||||||||||||||||
Sbjct: 2432708 cgcctgctcgccgccgccgac 2432728
to top
>ref|XM_787571.1| PREDICTED: Strongylocentrotus purpuratus similar to
           Chromodomain-helicase-DNA-binding protein 8 (CHD-8)
           (Helicase with SNF2 domain 1) (LOC587861), mRNA
          Length = 6162

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 cgacgagatggggctggggaagacc 270
           |||||||||||||||||| ||||||
Sbjct: 51  cgacgagatggggctgggcaagacc 75
to top
>ref|XM_777562.1| PREDICTED: Strongylocentrotus purpuratus similar to chromodomain
            helicase DNA binding protein 8 (LOC577327), mRNA
          Length = 5787

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 246  cgacgagatggggctggggaagacc 270
            |||||||||||||||||| ||||||
Sbjct: 3501 cgacgagatggggctgggcaagacc 3525
to top
>emb|X91637.1|GGBRG1PRT G.gallus mRNA for BRG1 protein
          Length = 4893

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 246  cgacgagatggggctggggaa 266
            |||||||||||||||||||||
Sbjct: 2325 cgacgagatggggctggggaa 2345
to top
>ref|NM_011417.2| Mus musculus SWI/SNF related, matrix associated, actin dependent
            regulator of chromatin, subfamily a, member 4 (Smarca4),
            mRNA
          Length = 5521

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 250  gagatggggctggggaagacc 270
            |||||||||||||||||||||
Sbjct: 2598 gagatggggctggggaagacc 2618
to top
>gb|BC060229.1| Mus musculus SWI/SNF related, matrix associated, actin dependent
            regulator of chromatin, subfamily a, member 4, mRNA (cDNA
            clone MGC:77959 IMAGE:6840009), complete cds
          Length = 5417

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 250  gagatggggctggggaagacc 270
            |||||||||||||||||||||
Sbjct: 2492 gagatggggctggggaagacc 2512
to top
>dbj|AK141517.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length
            enriched library, clone:C530049C04 product:SWI/SNF
            related, matrix associated, actin dependent regulator of
            chromatin, subfamily a, member 4, full insert sequence
          Length = 3800

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 250  gagatggggctggggaagacc 270
            |||||||||||||||||||||
Sbjct: 1752 gagatggggctggggaagacc 1772
to top
>dbj|AK147285.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN
            full-length enriched library, clone:M5C1007E14
            product:SWI/SNF related, matrix associated, actin
            dependent regulator of chromatin, subfamily a, member 4,
            full insert sequence
          Length = 5456

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 250  gagatggggctggggaagacc 270
            |||||||||||||||||||||
Sbjct: 2552 gagatggggctggggaagacc 2572
to top
>dbj|AK160825.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:3425403L20 product:SWI/SNF
            related, matrix associated, actin dependent regulator of
            chromatin, subfamily a, member 4, full insert sequence
          Length = 6280

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 250  gagatggggctggggaagacc 270
            |||||||||||||||||||||
Sbjct: 2502 gagatggggctggggaagacc 2522
to top
>dbj|AK166837.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
            library, clone:I1C0015P12 product:SWI/SNF related, matrix
            associated, actin dependent regulator of chromatin,
            subfamily a, member 4, full insert sequence
          Length = 5405

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 250  gagatggggctggggaagacc 270
            |||||||||||||||||||||
Sbjct: 2503 gagatggggctggggaagacc 2523
to top
>gb|S68108.1| brg1=brahma homolog [mice, embryo, erythroleukemia cell line CB7,
           mRNA Partial, 3513 nt]
          Length = 3513

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 250 gagatggggctggggaagacc 270
           |||||||||||||||||||||
Sbjct: 564 gagatggggctggggaagacc 584
to top
>emb|CR386792.1| Gallus gallus finished cDNA, clone ChEST910a3
          Length = 836

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 78  ccgcctgctcgccgccgccga 98
           |||||||||||||||||||||
Sbjct: 328 ccgcctgctcgccgccgccga 348
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 76       cgccgcctgctcgccgccgcc 96
                |||||||||||||||||||||
Sbjct: 37818705 cgccgcctgctcgccgccgcc 37818725
to top
>gb|AF254822.1|AF254822 Homo sapiens SMARCA4 isoform (SMARCA4) gene, complete cds,
             alternatively spliced
          Length = 102910

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 246   cgacgagatggggctggggaagacc 270
             |||||||||||| ||||||||||||
Sbjct: 52876 cgacgagatgggcctggggaagacc 52900
to top
>dbj|AB056583.1| Streptomyces griseus epoA, ORF1, ORF2 genes for EpoA, hypothetical
            protein, putative transcriptional regulator, complete and
            partial cds
          Length = 4573

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 242  tcggcgacgagatggggctggggaagaccctgcaggc 278
            |||| |||||||||||||| || |||||| |||||||
Sbjct: 2834 tcggggacgagatggggctcggcaagaccgtgcaggc 2798
to top
>gb|AC011442.5|AC011442 Homo sapiens chromosome 19 clone CTC-215O4, complete sequence
          Length = 143557

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 246    cgacgagatggggctggggaagacc 270
              |||||||||||| ||||||||||||
Sbjct: 134703 cgacgagatgggcctggggaagacc 134727
to top
>ref|NM_205059.1| Gallus gallus BRG1 protein (BRG1), mRNA
          Length = 4893

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 246  cgacgagatggggctggggaa 266
            |||||||||||||||||||||
Sbjct: 2325 cgacgagatggggctggggaa 2345
to top
>ref|XM_343358.2| PREDICTED: Rattus norvegicus SWI/SNF related, matrix associated,
            actin dependent regulator of chromatin, subfamily a,
            member 4 (Smarca4), mRNA
          Length = 5232

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 250  gagatggggctggggaagacc 270
            |||||||||||||||||||||
Sbjct: 2520 gagatggggctggggaagacc 2540
to top
>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0491F11
          Length = 152274

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 76    cgccgcctgctcgccgccgcc 96
             |||||||||||||||||||||
Sbjct: 40061 cgccgcctgctcgccgccgcc 40081
to top
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0039A07
          Length = 148892

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 76     cgccgcctgctcgccgccgcc 96
              |||||||||||||||||||||
Sbjct: 147006 cgccgcctgctcgccgccgcc 147026
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     cctgctcgccgccgccgacct 101
              |||||||||||||||||||||
Sbjct: 366668 cctgctcgccgccgccgacct 366688



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 81      cctgctcgccgccgccgacc 100
               ||||||||||||||||||||
Sbjct: 5497568 cctgctcgccgccgccgacc 5497587



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 81      cctgctcgccgccgccgacc 100
               ||||||||||||||||||||
Sbjct: 2109304 cctgctcgccgccgccgacc 2109323
to top
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0455F03
          Length = 158201

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 75    gcgccgcctgctcgccgccgc 95
             |||||||||||||||||||||
Sbjct: 99196 gcgccgcctgctcgccgccgc 99176
to top
>dbj|AK106452.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-F02, full
           insert sequence
          Length = 1652

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 75  gcgccgcctgctcgccgccgc 95
           |||||||||||||||||||||
Sbjct: 590 gcgccgcctgctcgccgccgc 610
to top
>dbj|AK099405.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K17, full
           insert sequence
          Length = 1696

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 76  cgccgcctgctcgccgccgcc 96
           |||||||||||||||||||||
Sbjct: 411 cgccgcctgctcgccgccgcc 431
to top
>gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosynthetic gene cluster,
             complete sequence
          Length = 59816

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 241   ctcggcgacgagatggggctggggaagac 269
             |||||||||||||||||||| || |||||
Sbjct: 53083 ctcggcgacgagatggggctcggcaagac 53111
to top
>emb|AJ504723.1|RNO504723 Rattus norvegicus partial mRNA for brahma-related protein 1 (brg-1
            gene)
          Length = 4842

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 250  gagatggggctggggaagacc 270
            |||||||||||||||||||||
Sbjct: 2338 gagatggggctggggaagacc 2358
to top
>dbj|D26156.1|HUMHSNF2B Homo sapiens mRNA for transcriptional activator hSNF2b, complete cds
          Length = 5200

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 246  cgacgagatggggctggggaagacc 270
            |||||||||||| ||||||||||||
Sbjct: 2391 cgacgagatgggcctggggaagacc 2415
to top
>dbj|AB209313.1| Homo sapiens mRNA for SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin a4 variant protein
          Length = 5192

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 246  cgacgagatggggctggggaagacc 270
            |||||||||||| ||||||||||||
Sbjct: 2207 cgacgagatgggcctggggaagacc 2231
to top
>gb|U29175.1|HSU29175 Human transcriptional activator (BRG1) mRNA, complete cds
          Length = 5247

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 246  cgacgagatggggctggggaagacc 270
            |||||||||||| ||||||||||||
Sbjct: 2412 cgacgagatgggcctggggaagacc 2436
to top
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0008G24
          Length = 152736

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 76    cgccgcctgctcgccgccgcc 96
             |||||||||||||||||||||
Sbjct: 77953 cgccgcctgctcgccgccgcc 77973
to top
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 75      gcgccgcctgctcgccgccgccga 98
               |||||||||||||||||| |||||
Sbjct: 1997110 gcgccgcctgctcgccgcggccga 1997133
to top
>ref|XM_479497.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2035

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 87   cgccgccgccgacctcgtcc 106
            ||||||||||||||||||||
Sbjct: 1469 cgccgccgccgacctcgtcc 1488
to top
>ref|NM_212716.1| Danio rerio SWI/SNF related, matrix associated, actin dependent
            regulator of chromatin, subfamily a, member 2 (smarca2),
            mRNA
          Length = 6061

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 247  gacgagatggggctggggaagacc 270
            ||||||||||| ||||||||||||
Sbjct: 2357 gacgagatgggtctggggaagacc 2380
to top
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 75     gcgccgcctgctcgccgccgccga 98
              |||||||| |||||||||||||||
Sbjct: 549351 gcgccgcccgctcgccgccgccga 549374
to top
>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035I01, complete sequence
          Length = 147813

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tgctcgccgccgccgacctc 102
             ||||||||||||||||||||
Sbjct: 11637 tgctcgccgccgccgacctc 11618
to top
>ref|XM_417313.1| PREDICTED: Gallus gallus similar to chromodomain helicase DNA binding
            protein 6; helicase C-terminal domain- and SNF2
            N-terminal domain-containing protein (LOC419127), mRNA
          Length = 9140

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  gagatggggctggggaagac 269
            ||||||||||||||||||||
Sbjct: 1792 gagatggggctggggaagac 1811
to top
>gb|AE009307.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 77 of
            187 of the complete sequence
          Length = 11913

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 174  caagccgcaccagctcgacg 193
            ||||||||||||||||||||
Sbjct: 4360 caagccgcaccagctcgacg 4379
to top
>gb|AE008307.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 111 of
            187 of the complete sequence
          Length = 11814

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 174  caagccgcaccagctcgacg 193
            ||||||||||||||||||||
Sbjct: 5367 caagccgcaccagctcgacg 5348
to top
>gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole biosynthesis gene
            cluster, complete sequence
          Length = 84868

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  acgtcctgctcggcgacgag 252
            ||||||||||||||||||||
Sbjct: 4983 acgtcctgctcggcgacgag 5002
to top
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 76      cgccgcctgctcgccgccgc 95
               ||||||||||||||||||||
Sbjct: 4280996 cgccgcctgctcgccgccgc 4281015
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 246     cgacgagatggggctggggaagaccctgcagg 277
               |||||| ||||| ||||| |||||||||||||
Sbjct: 1613958 cgacgacatgggtctgggcaagaccctgcagg 1613927
to top
>emb|CR391913.7| Zebrafish DNA sequence from clone DKEY-118P6 in linkage group 5,
             complete sequence
          Length = 190731

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 247   gacgagatggggctggggaagacc 270
             ||||||||||| ||||||||||||
Sbjct: 95414 gacgagatgggtctggggaagacc 95437
to top
>gb|AY349011.1| Burkholderia cepacia phage Bcep22, complete genome
          Length = 63882

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    cgagcgccgcctgctcgccg 91
             ||||||||||||||||||||
Sbjct: 22442 cgagcgccgcctgctcgccg 22461
to top
>gb|AC144400.2| Lemur catta clone LBNL2-87E20, complete sequence
          Length = 181705

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    cgccgcctgctcgccgccgc 95
             ||||||||||||||||||||
Sbjct: 36160 cgccgcctgctcgccgccgc 36179
to top
>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 85      ctcgccgccgccgacctcgtcctc 108
               |||||||||| |||||||||||||
Sbjct: 1315625 ctcgccgccgtcgacctcgtcctc 1315602
to top
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 69      ctacgagcgccgcctgctcgccgc 92
               ||||||||||||||||| ||||||
Sbjct: 3547256 ctacgagcgccgcctgcacgccgc 3547279
to top
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 82    ctgctcgccgccgccgacctcgtc 105
             |||||||||||| |||||||||||
Sbjct: 64978 ctgctcgccgccaccgacctcgtc 65001
to top
>gb|BC060676.1| Danio rerio SWI/SNF related, matrix associated, actin dependent
            regulator of chromatin, subfamily a, member 2, mRNA (cDNA
            clone MGC:66238 IMAGE:3818447), complete cds
          Length = 6061

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 247  gacgagatggggctggggaagacc 270
            ||||||||||| ||||||||||||
Sbjct: 2357 gacgagatgggtctggggaagacc 2380
to top
>gb|AE011887.1| Xanthomonas axonopodis pv. citri str. 306,  section 265 of 469 of the
            complete genome
          Length = 13339

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 63   caccgcctacgagcgccgcctgct 86
            |||||||||||| |||||||||||
Sbjct: 3021 caccgcctacgaacgccgcctgct 3044
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 82      ctgctcgccgccgccgacctcgtc 105
               ||||||| ||||||||||||||||
Sbjct: 2678905 ctgctcgacgccgccgacctcgtc 2678882
to top
>ref|XM_697477.1| PREDICTED: Danio rerio hypothetical protein LOC554513 (LOC554513),
            mRNA
          Length = 6046

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 247  gacgagatggggctggggaagacc 270
            ||||||||||| ||||||||||||
Sbjct: 2357 gacgagatgggtctggggaagacc 2380
to top
>ref|XM_683175.1| PREDICTED: Danio rerio similar to SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin a1 isoform a
           (LOC559803), mRNA
          Length = 3188

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 250 gagatggggctggggaagaccctgcaggcaat 281
           |||||||| ||||| |||||||||||| ||||
Sbjct: 505 gagatgggtctgggtaagaccctgcagacaat 536
to top
>ref|XM_687842.1| PREDICTED: Danio rerio similar to Phasmid Socket Absent PSA-4,
            homolog of SWI2/SNF2-related matrix-associated
            actin-dependent regulator of chromatin, required for an
            asymmetric cell division (170.6 kD) (psa-4) (LOC564516),
            mRNA
          Length = 4485

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 247  gacgagatggggctggggaagacc 270
            ||||||||||| ||||||||||||
Sbjct: 2041 gacgagatgggtctggggaagacc 2064
to top
>emb|BX934592.1| Gallus gallus finished cDNA, clone ChEST93d1
          Length = 1052

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 250 gagatggggctggggaagac 269
           ||||||||||||||||||||
Sbjct: 710 gagatggggctggggaagac 729
to top
>ref|XM_227510.3| PREDICTED: Rattus norvegicus chromodomain helicase DNA binding
           protein 1-like (predicted) (Chd1l_predicted), mRNA
          Length = 3546

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 247 gacgagatggggctggggaagacc 270
           ||||||||||| ||||||||||||
Sbjct: 799 gacgagatgggcctggggaagacc 822
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 80      gcctgctcgccgccgccgac 99
               ||||||||||||||||||||
Sbjct: 1656729 gcctgctcgccgccgccgac 1656710
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 71      acgagcgccgcctgctcgccgccg 94
               |||||||||||| |||||||||||
Sbjct: 3414497 acgagcgccgccggctcgccgccg 3414520
to top
>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0037D09
          Length = 140470

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    cgccgccgccgacctcgtcc 106
             ||||||||||||||||||||
Sbjct: 71826 cgccgccgccgacctcgtcc 71807
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>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0580A11
          Length = 174673

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 247   gacgagatggggctggggaagacc 270
             |||||||||||| |||||||||||
Sbjct: 29191 gacgagatggggatggggaagacc 29214
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>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0618H09
          Length = 142306

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    cgccgccgccgacctcgtcc 106
             ||||||||||||||||||||
Sbjct: 63615 cgccgccgccgacctcgtcc 63596
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>ref|XM_320523.2| Anopheles gambiae str. PEST ENSANGP00000008665 (ENSANGG00000006524),
            partial mRNA
          Length = 5853

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 246  cgacgagatggggctggggaagac 269
            |||||||||||||||||| |||||
Sbjct: 2244 cgacgagatggggctgggcaagac 2267
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>dbj|AK101251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032F02, full
            insert sequence
          Length = 2035

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 87   cgccgccgccgacctcgtcc 106
            ||||||||||||||||||||
Sbjct: 1469 cgccgccgccgacctcgtcc 1488
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 177     gccgcaccagctcgacggcg 196
               ||||||||||||||||||||
Sbjct: 1683179 gccgcaccagctcgacggcg 1683198
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>emb|AL928727.8| Zebrafish DNA sequence from clone CH211-130P8 in linkage group 5,
             complete sequence
          Length = 172861

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 247   gacgagatggggctggggaagacc 270
             ||||||||||| ||||||||||||
Sbjct: 90606 gacgagatgggtctggggaagacc 90583
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 81      cctgctcgccgccgccgacc 100
               ||||||||||||||||||||
Sbjct: 2975016 cctgctcgccgccgccgacc 2974997



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     cgcctgctcgccgccgccga 98
              ||||||||||||||||||||
Sbjct: 861075 cgcctgctcgccgccgccga 861094
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 81      cctgctcgccgccgccgacc 100
               ||||||||||||||||||||
Sbjct: 1721559 cctgctcgccgccgccgacc 1721578
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>emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC gene, disD gene,
            ORF1, ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9,
            ORF10, ORF11, ORF12, ORF13, ORF14, ORF15, ORF16, ORF17,
            ORF18 and ORF19
          Length = 86080

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  acgtcctgctcggcgacgag 252
            ||||||||||||||||||||
Sbjct: 4901 acgtcctgctcggcgacgag 4920
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 244     ggcgacgagatggggctggg 263
               ||||||||||||||||||||
Sbjct: 2860304 ggcgacgagatggggctggg 2860323



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 241    ctcggcgacgagatggggctggggaagaccctgcag 276
              |||| |||||| ||||||||||| |||||| |||||
Sbjct: 713720 ctcgccgacgacatggggctgggcaagaccgtgcag 713685
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>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17,
              complete sequence
          Length = 134631

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     tgctcgccgccgccgacctc 102
              ||||||||||||||||||||
Sbjct: 111405 tgctcgccgccgccgacctc 111386
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>dbj|AB045781.1| Pratylenchus penetrans Pp-eng-2 mRNA for beta-1,4-endoglucanase,
           complete cds
          Length = 1172

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 40  ccgccgctcctccctatggc 59
           ||||||||||||||||||||
Sbjct: 102 ccgccgctcctccctatggc 121


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,848,133
Number of Sequences: 3902068
Number of extensions: 2848133
Number of successful extensions: 75633
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71189
Number of HSP's gapped (non-prelim): 4444
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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