>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene
          Length = 3444

 Score =  198 bits (100), Expect = 1e-47
 Identities = 210/246 (85%), Gaps = 18/246 (7%)
 Strand = Plus / Plus

                                                                       
Query: 217 ccgtgcgctcccgtggcgaccggagctccg----cacccaccaatgcagtggtcaacctc 272
           |||||||||||||||||||| |||||||||    |||| |||| | ||||||||||||||
Sbjct: 511 ccgtgcgctcccgtggcgacaggagctccgtccgcaccaaccatttcagtggtcaacctc 570

                                                                       
Query: 273 gccgtcgagttctacaccaacccactgtcgcac--ctacctcct------cagctgcgcc 324
           |||||| || |||||||||||||||| || |||  |||||| ||      | ||||||||
Sbjct: 571 gccgtccaggtctacaccaacccactctctcacacctacctactagtacacggctgcgcc 630

                                                                       
Query: 325 tgcgctgcctatttaatccatccactccctccatccccctccaagaagagccatagctta 384
           ||||||| ||||||||||| ||| |||||||||| |||||||||||||||||| ||||| 
Sbjct: 631 tgcgctgtctatttaatccctcccctccctccattcccctccaagaagagccacagcttc 690

                                                                       
Query: 385 atctgcagctacagctcctcttcagcacagccccttctgtttctgcaggacacagatcaa 444
           ||||||||||||||||||||||||||||| |||      ||||| |||||||||||||||
Sbjct: 691 atctgcagctacagctcctcttcagcacaaccc------tttcttcaggacacagatcaa 744

                 
Query: 445 tccaga 450
           ||||||
Sbjct: 745 tccaga 750



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 163 gctttgcccacgtcgactgagtccag 188
           ||||||||||||||||||||||||||
Sbjct: 444 gctttgcccacgtcgactgagtccag 469



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 453 tccagatacgcatacacctgccggcgtc 480
           ||||||||| || |||||||||||||||
Sbjct: 806 tccagatacacacacacctgccggcgtc 833

>gb|AF329477.2| Arthrobacter globiformis N,N-dimethylglycine oxidase operon, complete
            sequence; hypothetical protein, putative formate
            dehydrogenase (fdh), putative molibdopterin biosynthesis
            protein (moeA), putative IclR-family transcriptional
            regulator (dioR), putative oxygenase (dio), putative
            ferredoxin reductase (fdr), putative ferredoxin (fdx),
            putative 10-formyltetrahydrofolate deformylase (purU2),
            and dimethylglycine oxidase (dmg2) genes, complete cds;
            and hypothetical protein gene, partial cds
          Length = 17796

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 220  tgcgctcccgtggcgaccggagct 243
            ||||||||||||||||||||||||
Sbjct: 9276 tgcgctcccgtggcgaccggagct 9299

>gb|AC024563.6| Homo sapiens chromosome 19 clone CTC-451A6, complete sequence
          Length = 158541

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 387   ctgcagctacagctcctcttcag 409
             |||||||||||||||||||||||
Sbjct: 54770 ctgcagctacagctcctcttcag 54748

>gb|AC011467.7| Homo sapiens chromosome 19 clone CTC-457E21, complete sequence
          Length = 187888

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 387   ctgcagctacagctcctcttcag 409
             |||||||||||||||||||||||
Sbjct: 35727 ctgcagctacagctcctcttcag 35749

>dbj|AP003065.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-31L22, complete
             sequences
          Length = 190102

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 340   atccatccactccctccatcccc 362
             |||||||||||||||||||||||
Sbjct: 74026 atccatccactccctccatcccc 74048

>gb|U28940.1| Caenorhabditis elegans cosmid T24H7, complete sequence
          Length = 20823

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 272  cgccgtcgagttctacaccaac 293
            ||||||||||||||||||||||
Sbjct: 2439 cgccgtcgagttctacaccaac 2418

>emb|X87946.1|OSDNAZB8 O.sativa ZB8 gene
          Length = 4660

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 351  ccctccatccccctccaagaagagcc 376
            |||||||| |||||||||||||||||
Sbjct: 2175 ccctccattcccctccaagaagagcc 2200

>emb|BX323857.16| Mouse DNA sequence from clone RP23-12C2 on chromosome 4, complete
             sequence
          Length = 104942

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 409   gcacagccccttctgtttctgc 430
             ||||||||||||||||||||||
Sbjct: 51971 gcacagccccttctgtttctgc 51950

>ref|NM_062844.2| Caenorhabditis elegans T24H7.5c (ATPase) mRNA, complete cds
          Length = 769

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 272 cgccgtcgagttctacaccaac 293
           ||||||||||||||||||||||
Sbjct: 568 cgccgtcgagttctacaccaac 589

>ref|NM_062843.3| Caenorhabditis elegans T24H7.5b (ATPase) mRNA, complete cds
          Length = 4468

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 272  cgccgtcgagttctacaccaac 293
            ||||||||||||||||||||||
Sbjct: 4164 cgccgtcgagttctacaccaac 4185

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 351      ccctccatccccctccaagaagagcc 376
                |||||||| |||||||||||||||||
Sbjct: 25027630 ccctccattcccctccaagaagagcc 25027605

>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0042D01
          Length = 148305

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 351   ccctccatccccctccaagaagagcc 376
             |||||||| |||||||||||||||||
Sbjct: 40618 ccctccattcccctccaagaagagcc 40593

>emb|Z49147.1|HVPAL7RM H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1777
           bp)
          Length = 1777

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 503 acttctctgcatatcacgatggagt 527
           ||||||||||||||| |||||||||
Sbjct: 113 acttctctgcatatctcgatggagt 137

>gb|AC107631.20| Mus musculus chromosome 5, clone RP23-5M20, complete sequence
          Length = 225977

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 346   ccactccctccatccccctcc 366
             |||||||||||||||||||||
Sbjct: 55242 ccactccctccatccccctcc 55262

>ref|NM_212648.1| Danio rerio dishevelled, dsh homolog 2 (Drosophila) (dvl2), mRNA
          Length = 2604

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 385 atctgcagctacagctcctc 404
           ||||||||||||||||||||
Sbjct: 961 atctgcagctacagctcctc 942

>ref|NM_013220.1| Rattus norvegicus ankyrin repeat domain 1 (cardiac muscle) (Ankrd1),
            mRNA
          Length = 1749

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 348  actccctccatccccctcca 367
            ||||||||||||||||||||
Sbjct: 1622 actccctccatccccctcca 1603

>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete
              sequence
          Length = 787999

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 315    cagctgcgcctgcgctgcct 334
              ||||||||||||||||||||
Sbjct: 434482 cagctgcgcctgcgctgcct 434501

>gb|BC072699.1| Rattus norvegicus ankyrin repeat domain 1 (cardiac muscle), mRNA
            (cDNA clone MGC:91764 IMAGE:7105899), complete cds
          Length = 1775

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 348  actccctccatccccctcca 367
            ||||||||||||||||||||
Sbjct: 1614 actccctccatccccctcca 1595

>gb|AY769469.1| Stylonychia lemnae macronuclear development protein 61 (mdp61)
           mRNA, partial sequence
          Length = 741

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 433 gacacagatcaatccagaattcca 456
           ||||||| ||||||||||||||||
Sbjct: 261 gacacagctcaatccagaattcca 284

>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 446     ccagaattccagatacgcat 465
               ||||||||||||||||||||
Sbjct: 2455951 ccagaattccagatacgcat 2455932

>emb|CR376787.10| Zebrafish DNA sequence from clone DKEY-33C9 in linkage group 7,
             complete sequence
          Length = 217684

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   atctgcagctacagctcctc 404
             ||||||||||||||||||||
Sbjct: 15921 atctgcagctacagctcctc 15902

>ref|XM_568344.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNM01480) partial mRNA
          Length = 2630

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 315 cagctgcgcctgcgctgcct 334
           ||||||||||||||||||||
Sbjct: 268 cagctgcgcctgcgctgcct 249

>gb|AC132269.3| Mus musculus BAC clone RP24-409M22 from chromosome 12, complete
             sequence
          Length = 172018

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   cactccctccatccccctcc 366
             ||||||||||||||||||||
Sbjct: 89802 cactccctccatccccctcc 89783

>emb|AL355137.23| Human DNA sequence from clone RP11-511D14 on chromosome 6p23-24.3
              Contains the gene for a novel protein isentical to
              ribosomal protein L15 (RPL15), complete sequence
          Length = 190223

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 345    tccactccctccatccccctccaa 368
              ||||||||||||||||||| ||||
Sbjct: 139269 tccactccctccatcccccaccaa 139292

>gb|BC044381.1| Danio rerio dishevelled, dsh homolog 2 (Drosophila), mRNA (cDNA
           clone MGC:55372 IMAGE:2601872), complete cds
          Length = 2604

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 385 atctgcagctacagctcctc 404
           ||||||||||||||||||||
Sbjct: 961 atctgcagctacagctcctc 942

>ref|XM_697464.1| PREDICTED: Danio rerio similar to dishevelled, dsh homolog 2
           (Drosophila) (LOC554548), mRNA
          Length = 1144

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 385 atctgcagctacagctcctc 404
           ||||||||||||||||||||
Sbjct: 961 atctgcagctacagctcctc 942

>emb|BX897680.7| Zebrafish DNA sequence from clone CH211-78K1, complete sequence
          Length = 43749

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   atctgcagctacagctcctc 404
             ||||||||||||||||||||
Sbjct: 40944 atctgcagctacagctcctc 40925

>gb|AC009501.4| Homo sapiens BAC clone RP11-511I11 from 2, complete sequence
          Length = 157173

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 98    ggatagccctctgccaccaacccc 121
             |||||||||||| |||||||||||
Sbjct: 32794 ggatagccctcttccaccaacccc 32771

>gb|AC155921.2| Mus musculus BAC clone RP24-570C10 from chromosome 9, complete sequence
          Length = 190479

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   ctccctccatccccctccaa 368
             ||||||||||||||||||||
Sbjct: 21807 ctccctccatccccctccaa 21826

>emb|BX901879.18| Zebrafish DNA sequence from clone CH211-226N2 in linkage group 7,
              complete sequence
          Length = 152392

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    atctgcagctacagctcctc 404
              ||||||||||||||||||||
Sbjct: 111453 atctgcagctacagctcctc 111472

>gb|U50736.1|RNU50736 Rattus norvegicus cardiac adriamycin responsive protein mRNA,
            complete cds
          Length = 1749

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 348  actccctccatccccctcca 367
            ||||||||||||||||||||
Sbjct: 1622 actccctccatccccctcca 1603

>gb|AC123917.25| Mus musculus chromosome 15, clone RP23-281P5, complete sequence
          Length = 184959

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 482   agctagctcacttgctttag 501
             ||||||||||||||||||||
Sbjct: 34160 agctagctcacttgctttag 34141


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,556,909
Number of Sequences: 3902068
Number of extensions: 3556909
Number of successful extensions: 66235
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66093
Number of HSP's gapped (non-prelim): 141
length of query: 527
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 504
effective length of database: 17,143,297,704
effective search space: 8640222042816
effective search space used: 8640222042816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)