>DPOA_SCHPO (P28040) DNA polymerase alpha catalytic subunit (EC 2.7.7.7) (DNA|
           polymerase I)
          Length = 1405

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 16  ADPSQTVPSRLPPVPRALDSLPLPGGP 96
           +DP + +P  +P  P+   SLP+P  P
Sbjct: 189 SDPKKYIPETVPSTPQPASSLPIPSSP 215

>GAG_FSVGR (P03339) Core protein p15|
          Length = 117

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = +1

Query: 7   SLCADPSQTVPSRLPPVPRALDSLPLPGGPQP 102
           SL  DP   V   LPP P+   SLP P  PQP
Sbjct: 87  SLATDPPSWVRPFLPP-PKPPTSLPQPHSPQP 117

>PODXL_RABIT (Q28645) Podocalyxin-like protein 1 precursor|
          Length = 551

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 25  SQTVPSRLPPVPRALDSLPLPGGPQP 102
           +Q +PS +PP P +  S P P  P P
Sbjct: 241 TQGMPSPMPPSPASPSSSPFPSSPSP 266

>GAG_FSVGA (P03337) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30]
          Length = 425

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = +1

Query: 7   SLCADPSQTVPSRLPPVPRALDSLPLPGGPQP 102
           SL  DP   V   LPP P+   SLP P  PQP
Sbjct: 165 SLATDPPSWVRPFLPP-PKPPTSLPQPLSPQP 195

>THIL_CHRVI (P45369) Acetyl-CoA acetyltransferase (EC 2.3.1.9) (Acetoacetyl-CoA|
           thiolase)
          Length = 394

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -1

Query: 142 ASTSGFLRGRLSTMAAAPREEGESRELAGREEDGTGPFDLDQ 17
           A   GF R +    AAA +++ E+ + AGR +D   P ++ Q
Sbjct: 166 AQKYGFTREQQDAFAAASQQKTEAAQKAGRFQDEIIPIEIPQ 207

>VP61_NPVAC (Q03209) 61 kDa protein|
          Length = 543

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 22  PSQTVPSRLPPVPRALDSLPLPGGPQP 102
           P Q +P+  PP P  + ++P P  P P
Sbjct: 176 PEQIIPAAPPPPPSPVPNIPAPPPPPP 202


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,091,148
Number of Sequences: 219361
Number of extensions: 190967
Number of successful extensions: 1246
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 80,573,946
effective HSP length: 51
effective length of database: 69,386,535
effective search space used: 1665276840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)