>NOMO2_HUMAN (Q5JPE7) Nodal modulator 2 precursor (pM5 protein 2)|
          Length = 1267

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = +2

Query: 113 DEIDGCGGFVEASSGLAKSRRASESKFDYSDITVELCTVDGLVKESTQCAPN-GYYFIPV 289
           D + GCGGFV+           S+ + +YS I ++L T  G +K  T CAPN GY+ IP+
Sbjct: 34  DIVVGCGGFVK-----------SDVEINYSLIEIKLYTKHGTLKYQTDCAPNNGYFMIPL 82

Query: 290 YDKGSFVVRVKGP 328
           YDKG F+++++ P
Sbjct: 83  YDKGDFILKIEPP 95

>NOMO3_HUMAN (P69849) Nodal modulator 3 precursor (pM5 protein 3)|
          Length = 1222

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = +2

Query: 113 DEIDGCGGFVEASSGLAKSRRASESKFDYSDITVELCTVDGLVKESTQCAPN-GYYFIPV 289
           D + GCGGFV+           S+ + +YS I ++L T  G +K  T CAPN GY+ IP+
Sbjct: 34  DIVVGCGGFVK-----------SDVEINYSLIEIKLYTKHGTLKYQTDCAPNNGYFMIPL 82

Query: 290 YDKGSFVVRVKGP 328
           YDKG F+++++ P
Sbjct: 83  YDKGDFILKIEPP 95

>NOMO1_HUMAN (Q15155) Nodal modulator 1 precursor (pM5)|
          Length = 1222

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = +2

Query: 113 DEIDGCGGFVEASSGLAKSRRASESKFDYSDITVELCTVDGLVKESTQCAPN-GYYFIPV 289
           D + GCGGFV+           S+ + +YS I ++L T  G +K  T CAPN GY+ IP+
Sbjct: 34  DIVVGCGGFVK-----------SDVEINYSLIEIKLYTKHGTLKYQTDCAPNNGYFMIPL 82

Query: 290 YDKGSFVVRVKGP 328
           YDKG F+++++ P
Sbjct: 83  YDKGDFILKIEPP 95

>TNR17_MOUSE (O88472) Tumor necrosis factor receptor superfamily member 17|
           (B-cell maturation protein)
          Length = 185

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +2

Query: 116 EIDGCGGFVEASSGLAKSRRASESKFDYS-DITVELCTVDGLVKESTQCAPNGYYFIPVY 292
           ++DG     +A + L + R   +  F  S + TVE CT +  VK   +   + ++ +P  
Sbjct: 89  QLDGSAQLDKADTELTRIRAGDDRIFPRSLEYTVEECTCEDCVKSKPKGDSDHFFPLPAM 148

Query: 293 DKGSFVV 313
           ++G+ ++
Sbjct: 149 EEGATIL 155


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,462,380
Number of Sequences: 219361
Number of extensions: 486381
Number of successful extensions: 959
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 80,573,946
effective HSP length: 86
effective length of database: 61,708,900
effective search space used: 1481013600
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)