>gb|AY483155.1| Hordeum vulgare putative cellulose synthase catalytic subunit
           (CesA6) mRNA, complete cds
          Length = 3745

 Score =  335 bits (169), Expect = 5e-89
 Identities = 184/189 (97%)
 Strand = Plus / Plus

                                                                       
Query: 107 cgccggatctagagcggccttcccgtgcccctctcgactgaagcgagcgagaggccgccg 166
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 cgccggatctagagcggccttcccgtgcccctctcgactgaagcgagcgagaggccgccg 177

                                                                       
Query: 167 ccggtggggcgtgtgaaggcggggagatggccaccaaccgggggatggtcgccgggtcgc 226
           |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 178 ccggtggggcgtgtgagggcggggagatggcggccaaccgggggatggtcgccgggtcgc 237

                                                                       
Query: 227 acaaacgcgacgagttcgtcatgatccgcaacgacggcgacgcgcccgccccgggtaagg 286
           |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 acaaccgcaacgagttcgtcatgatccgcaacgacggcgacgcgcccgccccgggtaagg 297

                    
Query: 287 aggtgaaag 295
           |||||||||
Sbjct: 298 aggtgaaag 306



 Score =  151 bits (76), Expect = 1e-33
 Identities = 76/76 (100%)
 Strand = Plus / Plus

                                                                      
Query: 12 gagctccgagagtagttcttctccctctcgagagccagctcgcgggggatctgggaatgg 71
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 gagctccgagagtagttcttctccctctcgagagccagctcgcgggggatctgggaatgg 82

                          
Query: 72 tgcccatctccgccga 87
          ||||||||||||||||
Sbjct: 83 tgcccatctccgccga 98

>gb|DQ020208.1| Bambusa oldhamii cellulose synthase BoCesA1b mRNA, complete cds
          Length = 3453

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                       
Query: 223 tcgcacaaacgcgacgagttcgtcatgatccgcaacgacggcgacgcgcccgccccgggt 282
           |||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 204 tcgcacaaccgcaacgagttcgtcatgatccgccacgacggcgacgcgcccgccccggct 263

              
Query: 283 aag 285
           |||
Sbjct: 264 aag 266

>gb|AY110415.1| Zea mays CL1166_1 mRNA sequence
          Length = 3898

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 84/97 (86%)
 Strand = Plus / Plus

                                                                       
Query: 189 ggagatggccaccaaccgggggatggtcgccgggtcgcacaaacgcgacgagttcgtcat 248
           |||||||||  |||||  ||||||||| || || |||||||| ||| |||||||||||||
Sbjct: 185 ggagatggcggccaacaaggggatggtggcgggctcgcacaaccgcaacgagttcgtcat 244

                                                
Query: 249 gatccgcaacgacggcgacgcgcccgccccgggtaag 285
           ||||||| |||||||||||||||| | ||||| ||||
Sbjct: 245 gatccgccacgacggcgacgcgccgggcccggctaag 281

>gb|DQ020207.1| Bambusa oldhamii cellulose synthase BoCesA1a mRNA, complete cds
          Length = 3547

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                       
Query: 207 ggggatggtcgccgggtcgcacaaacgcgacgagttcgtcatgatccgcaacgacggcga 266
           ||||||||| || || || | ||| ||| |||||||||||||||||||| ||||||||||
Sbjct: 31  ggggatggtggcgggctcacgcaaccgcaacgagttcgtcatgatccgccacgacggcga 90

                              
Query: 267 cgcgcccgccccgggtaag 285
           |||||||||||||| ||||
Sbjct: 91  cgcgcccgccccggctaag 109

>gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 (CesA-2) mRNA, complete cds
          Length = 3725

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                       
Query: 189 ggagatggccaccaaccgggggatggtcgccgggtcgcacaaacgcgacgagttcgtcat 248
           |||||||||  |||||  ||||||||| || || || ||||| ||| |||||||||||||
Sbjct: 175 ggagatggcggccaacaaggggatggtggcaggctctcacaaccgcaacgagttcgtcat 234

                                                
Query: 249 gatccgcaacgacggcgacgcgcccgccccgggtaag 285
           ||||||| |||||||||||||||| | ||||| ||||
Sbjct: 235 gatccgccacgacggcgacgcgcctgtcccggctaag 271

>gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 (CesA-1) mRNA, complete cds
          Length = 3752

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                       
Query: 189 ggagatggccaccaaccgggggatggtcgccgggtcgcacaaacgcgacgagttcgtcat 248
           |||||||||  |||||  ||||||||| || || |||||||| ||| |||||||||||||
Sbjct: 179 ggagatggcggccaacaaggggatggtggcgggctcgcacaaccgcaacgagttcgtcat 238

                             
Query: 249 gatccgcaacgacggcga 266
           ||||||| ||||||||||
Sbjct: 239 gatccgccacgacggcga 256

>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08,
              complete sequence
          Length = 144781

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                   
Query: 236    acgagttcgtcatgatccgcaacgacggcgacgcgcc 272
              ||||||||||||||||||||  |||||||||||||||
Sbjct: 133694 acgagttcgtcatgatccgccccgacggcgacgcgcc 133658

>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0029B02, complete sequence
          Length = 156649

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                  
Query: 236   acgagttcgtcatgatccgcaacgacggcgacgcgcc 272
             ||||||||||||||||||||  |||||||||||||||
Sbjct: 22537 acgagttcgtcatgatccgccccgacggcgacgcgcc 22501

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                    
Query: 236     acgagttcgtcatgatccgcaacgacggcgacgcgcc 272
               ||||||||||||||||||||  |||||||||||||||
Sbjct: 4512070 acgagttcgtcatgatccgccccgacggcgacgcgcc 4512034

>dbj|AK102140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085K01, full
           insert sequence
          Length = 3768

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 236 acgagttcgtcatgatccgcaacgacggcgacgcgcc 272
           ||||||||||||||||||||  |||||||||||||||
Sbjct: 230 acgagttcgtcatgatccgccccgacggcgacgcgcc 266

>dbj|AK100188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034D20, full
           insert sequence
          Length = 3897

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 236 acgagttcgtcatgatccgcaacgacggcgacgcgcc 272
           ||||||||||||||||||||  |||||||||||||||
Sbjct: 230 acgagttcgtcatgatccgccccgacggcgacgcgcc 266

>dbj|AK099281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125F05, full
           insert sequence
          Length = 3801

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 236 acgagttcgtcatgatccgcaacgacggcgacgcgcc 272
           ||||||||||||||||||||  |||||||||||||||
Sbjct: 230 acgagttcgtcatgatccgccccgacggcgacgcgcc 266

>dbj|AK099228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091P03, full
           insert sequence
          Length = 3732

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 236 acgagttcgtcatgatccgcaacgacggcgacgcgcc 272
           ||||||||||||||||||||  |||||||||||||||
Sbjct: 230 acgagttcgtcatgatccgccccgacggcgacgcgcc 266

>dbj|AK067967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125H24, full
           insert sequence
          Length = 3802

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 236 acgagttcgtcatgatccgcaacgacggcgacgcgcc 272
           ||||||||||||||||||||  |||||||||||||||
Sbjct: 230 acgagttcgtcatgatccgccccgacggcgacgcgcc 266

>dbj|AK067850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123A09, full
           insert sequence
          Length = 1444

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 236 acgagttcgtcatgatccgcaacgacggcgacgcgcc 272
           ||||||||||||||||||||  |||||||||||||||
Sbjct: 233 acgagttcgtcatgatccgccccgacggcgacgcgcc 269

>gb|AF030052.1|AF030052 Oryza sativa subsp. japonica RSW1-like cellulose synthase catalytic
           subunit mRNA, partial cds
          Length = 1838

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 236 acgagttcgtcatgatccgcaacgacggcgacgcgcc 272
           ||||||||||||||||||||  |||||||||||||||
Sbjct: 133 acgagttcgtcatgatccgccccgacggcgacgcgcc 169

>dbj|AK098978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B06, full
           insert sequence
          Length = 3764

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 236 acgagttcgtcatgatccgcaacgacggcgacgcgcc 272
           |||||||||||||||| |||  |||||||||||||||
Sbjct: 230 acgagttcgtcatgattcgccccgacggcgacgcgcc 266

>gb|DQ020216.1| Bambusa oldhamii cellulose synthase BoCesA3b mRNA, complete cds
          Length = 3707

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 232 cgcgacgagttcgtcatgatccgcaacgacggcgacg 268
           ||||||| | |||||| ||||||| ||||||||||||
Sbjct: 119 cgcgacggggtcgtcacgatccgccacgacggcgacg 155

>gb|DQ020210.1| Bambusa oldhamii cellulose synthase BoCesA3a mRNA, complete cds
          Length = 3571

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 232 cgcgacgagttcgtcatgatccgcaacgacggcgacg 268
           ||||||| | |||||| ||||||| ||||||||||||
Sbjct: 110 cgcgacggggtcgtcacgatccgccacgacggcgacg 146

>gb|DQ020209.1| Bambusa oldhamii cellulose synthase BoCesA2 mRNA, complete cds
          Length = 3648

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 232 cgcgacgagttcgtcatgatccgcaacgacggcgacg 268
           ||||||| | |||||| ||||||| ||||||||||||
Sbjct: 137 cgcgacggggtcgtcacgatccgccacgacggcgacg 173

>gb|AE005759.1| Caulobacter crescentus CB15 section 85 of 359 of the complete genome
          Length = 12748

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 165  cgccggtggggcgtgtgaaggcgg 188
            ||||||||||||| ||||||||||
Sbjct: 8804 cgccggtggggcgggtgaaggcgg 8827

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 233     gcgacgagttcgtcatgatccgcaacga 260
               |||||||||| ||||| |||||||||||
Sbjct: 1376897 gcgacgagttggtcattatccgcaacga 1376870

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 261     cggcgacgcgcccgccccgg 280
               ||||||||||||||||||||
Sbjct: 1082814 cggcgacgcgcccgccccgg 1082833


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,510,735
Number of Sequences: 3902068
Number of extensions: 1510735
Number of successful extensions: 33732
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33470
Number of HSP's gapped (non-prelim): 262
length of query: 295
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 273
effective length of database: 17,147,199,772
effective search space: 4681185537756
effective search space used: 4681185537756
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)