ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl26h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479218.1| Oryza sativa (japonica cultivar-group), mRNA 78 2e-11
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
3dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
4dbj|AK063426.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
5dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
6gb|AC004033.3| Homo sapiens Chromosome 22q11.2 PAC Clone p_m11 I... 48 0.015
7gb|AC005500.2| Homo sapiens 22q11 PAC Clone Clone p52f6 In DGCR ... 48 0.015
8gb|AC007731.16| Homo sapiens chromosome 22 clone b562f10 map 22q... 48 0.015
9gb|AF081501.1|AF081501 Mus musculus pantophysin gene, complete cds 46 0.057
10gb|AC155258.2| Mus musculus BAC clone RP24-83B1 from 12, complet... 46 0.057
11gb|AC136020.5| Mus musculus BAC clone RP24-434I13 from 12, compl... 46 0.057
12emb|AL049709.18|HSDJ18C9 Human DNA sequence from clone RP1-18C9 ... 42 0.90
13gb|AC005104.1| Homo sapiens BAC clone CTA-442F18 from 2, complet... 42 0.90
14dbj|AP004546.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 0.90
15ref|XM_508888.1| PREDICTED: Pan troglodytes similar to DIPB prot... 40 3.5
16gb|AC162291.13| Mus musculus chromosome 18, clone RP23-264B14, c... 40 3.5
17gb|BC045602.1| Mus musculus tripartite motif-containing 44, mRNA... 40 3.5
18gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's... 40 3.5
19gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 3.5
20gb|BC024031.2| Homo sapiens tripartite motif-containing 44, mRNA... 40 3.5
21gb|BC013166.1| Homo sapiens tripartite motif-containing 44, mRNA... 40 3.5
22ref|NM_020267.2| Mus musculus tripartite motif-containing 44 (Tr... 40 3.5
23gb|AC102195.14| Mus musculus chromosome 18, clone RP24-430B21, c... 40 3.5
24ref|NM_017583.3| Homo sapiens tripartite motif-containing 44 (TR... 40 3.5
25gb|AY551091.1| Rattus norvegicus DIPB protein mRNA, complete cds 40 3.5
26gb|BC039979.1| Mus musculus tripartite motif-containing 44, mRNA... 40 3.5
27gb|AC123026.4| Mus musculus BAC clone RP24-549O22 from chromosom... 40 3.5
28ref|NM_001013203.1| Rattus norvegicus tripartite motif protein 4... 40 3.5
29emb|AL163300.2|HS21C100 Homo sapiens chromosome 21 segment HS21C100 40 3.5
30emb|AL138812.13| Human DNA sequence from clone RP1-276E15 on chr... 40 3.5
31emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome... 40 3.5
32emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 3.5
33gb|BC098369.1| Mus musculus tripartite motif-containing 44, mRNA... 40 3.5
34emb|CR859908.1| Pongo pygmaeus mRNA; cDNA DKFZp469J1520 (from cl... 40 3.5
35gb|AC093550.3| Drosophila melanogaster 3L BAC RP98-24K7 (Roswell... 40 3.5
36gb|AC010156.6| Drosophila melanogaster 3L NOVECTOR RP98-27H3 (Ro... 40 3.5
37gb|AC090467.6| Homo sapiens chromosome 11, clone RP11-634M17, co... 40 3.5
38dbj|AB168291.1| Macaca fascicularis testis cDNA clone: QtsA-1102... 40 3.5
39gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 3.5
40gb|AF289774.1|AF289774 Duvernoia aconitiflora 18S ribosomal RNA ... 40 3.5
41ref|XM_578150.1| PREDICTED: Rattus norvegicus similar to Tripart... 40 3.5
42dbj|AK074242.1| Homo sapiens cDNA FLJ23662 fis, clone HEP01279, ... 40 3.5
43emb|AJ334424.1|HSA334424 Homo sapiens genomic sequence surroundi... 40 3.5
44emb|AJ249128.1|HSA249128 Homo sapiens mRNA for DIPB protein 40 3.5
45gb|AE003549.4| Drosophila melanogaster chromosome 3L, section 36... 40 3.5
46emb|AJ278191.1|MMU278191 Mus musculus mRNA for putative mc7 prot... 40 3.5
47emb|AL773604.1|HS225L15 Homo sapiens chromosome 21 from PAC RP1-... 40 3.5
48emb|AL691444.9| Mouse DNA sequence from clone RP23-224E21 on chr... 40 3.5
49emb|AJ249129.1|MMU249129 Mus musculus mRNA for DIPB protein 40 3.5 
>ref|XM_479218.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2281

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 184 tccgtgcgcggaacatgcgggatctgggcccatggcgaccggccccgatctgacc 238
           ||||||||||||||||||||||||  || ||||||||||||| ||||||||||||
Sbjct: 209 tccgtgcgcggaacatgcgggatcccggaccatggcgaccggacccgatctgacc 263
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                       
Query: 184      tccgtgcgcggaacatgcgggatctgggcccatggcgaccggccccgatctgacc 238
                ||||||||||||||||||||||||  || ||||||||||||| ||||||||||||
Sbjct: 25945413 tccgtgcgcggaacatgcgggatcccggaccatggcgaccggacccgatctgacc 25945467
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>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0506F02
          Length = 151612

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                    
Query: 184   tccgtgcgcggaacatgcgggatctgggcccatggcgaccggccccgatctgacc 238
             ||||||||||||||||||||||||  || ||||||||||||| ||||||||||||
Sbjct: 22425 tccgtgcgcggaacatgcgggatcccggaccatggcgaccggacccgatctgacc 22479
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>dbj|AK063426.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D02, full
           insert sequence
          Length = 2281

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 184 tccgtgcgcggaacatgcgggatctgggcccatggcgaccggccccgatctgacc 238
           ||||||||||||||||||||||||  || ||||||||||||| ||||||||||||
Sbjct: 209 tccgtgcgcggaacatgcgggatcccggaccatggcgaccggacccgatctgacc 263
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>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1339_F05
          Length = 132708

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                     
Query: 184    tccgtgcgcggaacatgcgggatctgggcccatggcgaccggccccgatctgacc 238
              ||||||||||||||||||||||||  || ||||||||||||| ||||||||||||
Sbjct: 115861 tccgtgcgcggaacatgcgggatcccggaccatggcgaccggacccgatctgacc 115915
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>gb|AC004033.3| Homo sapiens Chromosome 22q11.2 PAC Clone p_m11 In BCRL2-GGT Region,
             complete sequence
          Length = 145356

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 159   cggcccagccccccgccccgccggctcc 186
             |||||||| |||||||||||||||||||
Sbjct: 34933 cggcccaggcccccgccccgccggctcc 34906
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>gb|AC005500.2| Homo sapiens 22q11 PAC Clone Clone p52f6 In DGCR Region, complete
              sequence
          Length = 192592

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 159    cggcccagccccccgccccgccggctcc 186
              |||||||| |||||||||||||||||||
Sbjct: 147282 cggcccaggcccccgccccgccggctcc 147255
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>gb|AC007731.16| Homo sapiens chromosome 22 clone b562f10 map 22q11, complete sequence
          Length = 182617

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 159    cggcccagccccccgccccgccggctcc 186
              |||||||| |||||||||||||||||||
Sbjct: 152342 cggcccaggcccccgccccgccggctcc 152315
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>gb|AF081501.1|AF081501 Mus musculus pantophysin gene, complete cds
          Length = 24830

 Score = 46.1 bits (23), Expect = 0.057
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 157  tccggcccagccccccgccccgccggctccg 187
            |||||||| |||||| |||||||||||||||
Sbjct: 1660 tccggccccgcccccagccccgccggctccg 1690
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>gb|AC155258.2| Mus musculus BAC clone RP24-83B1 from 12, complete sequence
          Length = 221264

 Score = 46.1 bits (23), Expect = 0.057
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 157    tccggcccagccccccgccccgccggctccg 187
              |||||||| |||||| |||||||||||||||
Sbjct: 186041 tccggccccgcccccagccccgccggctccg 186071
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>gb|AC136020.5| Mus musculus BAC clone RP24-434I13 from 12, complete sequence
          Length = 193375

 Score = 46.1 bits (23), Expect = 0.057
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 157    tccggcccagccccccgccccgccggctccg 187
              |||||||| |||||| |||||||||||||||
Sbjct: 103348 tccggccccgcccccagccccgccggctccg 103378
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>emb|AL049709.18|HSDJ18C9 Human DNA sequence from clone RP1-18C9 on chromosome 20 Contains the 5'
             end of the ACAS2 gene for acetyl-Coenzyme A synthetase 2
             (ADP forming), the GGTL3 gene for gamma-
             glutamyltranspeptidase-like 3 protein, the HMG4L
             pseudogene similar to high mobility group proteins, the 5'
             end of the AIB3 gene for thyroid hormone receptor binding
             protein (KIAA0181) and four CpG Islands, complete sequence
          Length = 126755

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Minus

                                                  
Query: 153   ccggtccggcccagccccccgccccgccggctccgtg 189
             ||||||||||||| |||||  ||||||||||||||||
Sbjct: 31766 ccggtccggcccatccccct-ccccgccggctccgtg 31731
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>gb|AC005104.1| Homo sapiens BAC clone CTA-442F18 from 2, complete sequence
          Length = 134911

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    gagagaggaagaaaattccct 46
             |||||||||||||||||||||
Sbjct: 93173 gagagaggaagaaaattccct 93193
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>dbj|AP004546.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT43N05, TM0178,
             complete sequence
          Length = 97268

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 135   ccaaactccaaaccctagccg 155
             |||||||||||||||||||||
Sbjct: 20030 ccaaactccaaaccctagccg 20010



 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 135   ccaaactccaaaccctagccg 155
             |||||||||||||||||||||
Sbjct: 19949 ccaaactccaaaccctagccg 19929
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>ref|XM_508888.1| PREDICTED: Pan troglodytes similar to DIPB protein (LOC451701),
           mRNA
          Length = 1178

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  tcttcctcgctgtcttcttc 98
           ||||||||||||||||||||
Sbjct: 757 tcttcctcgctgtcttcttc 738
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>gb|AC162291.13| Mus musculus chromosome 18, clone RP23-264B14, complete sequence
          Length = 198736

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     gtcttcttctccatccctcc 109
              ||||||||||||||||||||
Sbjct: 141155 gtcttcttctccatccctcc 141174
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>gb|BC045602.1| Mus musculus tripartite motif-containing 44, mRNA (cDNA clone
          MGC:31708 IMAGE:4913543), complete cds
          Length = 5058

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 79 tcttcctcgctgtcttcttc 98
          ||||||||||||||||||||
Sbjct: 32 tcttcctcgctgtcttcttc 13
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>gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 230130

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     ctgtcttcttctccatccct 107
              ||||||||||||||||||||
Sbjct: 142427 ctgtcttcttctccatccct 142446
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                           
Query: 161     gcccagccccccgcc-ccgccggctccg 187
               ||||||||||||||| ||||||||||||
Sbjct: 1385125 gcccagccccccgccgccgccggctccg 1385152
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>gb|BC024031.2| Homo sapiens tripartite motif-containing 44, mRNA (cDNA clone
           MGC:3490 IMAGE:3532065), complete cds
          Length = 3082

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  tcttcctcgctgtcttcttc 98
           ||||||||||||||||||||
Sbjct: 602 tcttcctcgctgtcttcttc 583
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>gb|BC013166.1| Homo sapiens tripartite motif-containing 44, mRNA (cDNA clone
           MGC:9648 IMAGE:3924490), complete cds
          Length = 2080

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  tcttcctcgctgtcttcttc 98
           ||||||||||||||||||||
Sbjct: 702 tcttcctcgctgtcttcttc 683
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>ref|NM_020267.2| Mus musculus tripartite motif-containing 44 (Trim44), mRNA
          Length = 5612

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  tcttcctcgctgtcttcttc 98
           ||||||||||||||||||||
Sbjct: 617 tcttcctcgctgtcttcttc 598
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>gb|AC102195.14| Mus musculus chromosome 18, clone RP24-430B21, complete sequence
          Length = 173604

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    gtcttcttctccatccctcc 109
             ||||||||||||||||||||
Sbjct: 28765 gtcttcttctccatccctcc 28784
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>ref|NM_017583.3| Homo sapiens tripartite motif-containing 44 (TRIM44), mRNA
          Length = 3182

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  tcttcctcgctgtcttcttc 98
           ||||||||||||||||||||
Sbjct: 702 tcttcctcgctgtcttcttc 683
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>gb|AY551091.1| Rattus norvegicus DIPB protein mRNA, complete cds
          Length = 1035

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  tcttcctcgctgtcttcttc 98
           ||||||||||||||||||||
Sbjct: 398 tcttcctcgctgtcttcttc 379
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>gb|BC039979.1| Mus musculus tripartite motif-containing 44, mRNA (cDNA clone
          MGC:49764 IMAGE:4913543), complete cds
          Length = 5069

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 79 tcttcctcgctgtcttcttc 98
          ||||||||||||||||||||
Sbjct: 43 tcttcctcgctgtcttcttc 24
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>gb|AC123026.4| Mus musculus BAC clone RP24-549O22 from chromosome 3, complete sequence
          Length = 175610

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    tcttcttctccatccctcca 110
             ||||||||||||||||||||
Sbjct: 66209 tcttcttctccatccctcca 66190
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>ref|NM_001013203.1| Rattus norvegicus tripartite motif protein 44 (Trim44), mRNA
          Length = 1035

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  tcttcctcgctgtcttcttc 98
           ||||||||||||||||||||
Sbjct: 398 tcttcctcgctgtcttcttc 379
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>emb|AL163300.2|HS21C100 Homo sapiens chromosome 21 segment HS21C100
          Length = 340000

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 91     tcttcttctccatccctccagttc 114
              |||||||||||||| |||||||||
Sbjct: 132731 tcttcttctccatcactccagttc 132708
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>emb|AL138812.13| Human DNA sequence from clone RP1-276E15 on chromosome 11p12-14.1
             Contains the start of the gene for DIPB protein, ESTs,
             STSs, GSSs and a CpG island, complete sequence
          Length = 112356

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    tcttcctcgctgtcttcttc 98
             ||||||||||||||||||||
Sbjct: 81775 tcttcctcgctgtcttcttc 81794
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>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13
          Length = 348264

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                        
Query: 161  gcccagccccccgcc-ccgccggctccg 187
            ||||||||||||||| ||||||||||||
Sbjct: 2594 gcccagccccccgccgccgccggctccg 2621
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>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             5/14
          Length = 299450

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 161   gcccagccccccgcc-ccgccggctccg 187
             ||||||||||||||| ||||||||||||
Sbjct: 72281 gcccagccccccgccgccgccggctccg 72308
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>gb|BC098369.1| Mus musculus tripartite motif-containing 44, mRNA (cDNA clone
           MGC:102054 IMAGE:6830438), complete cds
          Length = 5609

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  tcttcctcgctgtcttcttc 98
           ||||||||||||||||||||
Sbjct: 586 tcttcctcgctgtcttcttc 567
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>emb|CR859908.1| Pongo pygmaeus mRNA; cDNA DKFZp469J1520 (from clone DKFZp469J1520)
          Length = 3119

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  tcttcctcgctgtcttcttc 98
           ||||||||||||||||||||
Sbjct: 634 tcttcctcgctgtcttcttc 615
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>gb|AC093550.3| Drosophila melanogaster 3L BAC RP98-24K7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184523

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    caagccaccgcccaccgcac 70
             ||||||||||||||||||||
Sbjct: 84908 caagccaccgcccaccgcac 84889
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>gb|AC010156.6| Drosophila melanogaster 3L NOVECTOR RP98-27H3 (Roswell Park Cancer
              Institute Drosophila BAC Library) complete sequence
          Length = 164831

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     caagccaccgcccaccgcac 70
              ||||||||||||||||||||
Sbjct: 159680 caagccaccgcccaccgcac 159699
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>gb|AC090467.6| Homo sapiens chromosome 11, clone RP11-634M17, complete sequence
          Length = 208525

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     tcttcctcgctgtcttcttc 98
              ||||||||||||||||||||
Sbjct: 111604 tcttcctcgctgtcttcttc 111585
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>dbj|AB168291.1| Macaca fascicularis testis cDNA clone: QtsA-11022, similar to human
           tripartite motif-containing 44 (TRIM44), mRNA, RefSeq:
           NM_017583.3
          Length = 1978

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  tcttcctcgctgtcttcttc 98
           ||||||||||||||||||||
Sbjct: 610 tcttcctcgctgtcttcttc 591
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 185     ccgtgcgcggaacatgcgggatct 208
               |||||||||||| |||||||||||
Sbjct: 3114400 ccgtgcgcggaaaatgcgggatct 3114423
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>gb|AF289774.1|AF289774 Duvernoia aconitiflora 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 684

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 166 gccccccgccccgccggctccgtg 189
           ||||||||||||||| ||||||||
Sbjct: 479 gccccccgccccgcccgctccgtg 456
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>ref|XM_578150.1| PREDICTED: Rattus norvegicus similar to Tripartite motif protein 44
           (DIPB protein) (LOC502656), mRNA
          Length = 2475

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  tcttcctcgctgtcttcttc 98
           ||||||||||||||||||||
Sbjct: 398 tcttcctcgctgtcttcttc 379
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>dbj|AK074242.1| Homo sapiens cDNA FLJ23662 fis, clone HEP01279, highly similar to
           Homo sapiens mRNA for DIPB protein
          Length = 3064

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  tcttcctcgctgtcttcttc 98
           ||||||||||||||||||||
Sbjct: 579 tcttcctcgctgtcttcttc 560
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>emb|AJ334424.1|HSA334424 Homo sapiens genomic sequence surrounding NotI site, clone NL1-HE9R
          Length = 645

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 147 ccctagccggtccggcccagccccccgc 174
           |||||||||  |||||||||||||||||
Sbjct: 38  ccctagccgtcccggcccagccccccgc 11
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>emb|AJ249128.1|HSA249128 Homo sapiens mRNA for DIPB protein
          Length = 1395

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  tcttcctcgctgtcttcttc 98
           ||||||||||||||||||||
Sbjct: 572 tcttcctcgctgtcttcttc 553
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>gb|AE003549.4| Drosophila melanogaster chromosome 3L, section 36 of 83 of the complete
             sequence
          Length = 295143

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    caagccaccgcccaccgcac 70
             ||||||||||||||||||||
Sbjct: 73066 caagccaccgcccaccgcac 73047
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>emb|AJ278191.1|MMU278191 Mus musculus mRNA for putative mc7 protein (mc7 gene)
          Length = 4522

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  tcttcctcgctgtcttcttc 98
           ||||||||||||||||||||
Sbjct: 625 tcttcctcgctgtcttcttc 606
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>emb|AL773604.1|HS225L15 Homo sapiens chromosome 21 from PAC RP1-225L15, map 21q22.3
          Length = 146350

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 91    tcttcttctccatccctccagttc 114
             |||||||||||||| |||||||||
Sbjct: 76363 tcttcttctccatcactccagttc 76340
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>emb|AL691444.9| Mouse DNA sequence from clone RP23-224E21 on chromosome 2, complete
              sequence
          Length = 182726

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     tcttcctcgctgtcttcttc 98
              ||||||||||||||||||||
Sbjct: 125890 tcttcctcgctgtcttcttc 125909
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>emb|AJ249129.1|MMU249129 Mus musculus mRNA for DIPB protein
          Length = 1338

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  tcttcctcgctgtcttcttc 98
           ||||||||||||||||||||
Sbjct: 563 tcttcctcgctgtcttcttc 544


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,795,258
Number of Sequences: 3902068
Number of extensions: 2795258
Number of successful extensions: 56486
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 56345
Number of HSP's gapped (non-prelim): 159
length of query: 272
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 250
effective length of database: 17,147,199,772
effective search space: 4286799943000
effective search space used: 4286799943000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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