ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl26h07 |
|---|---|
| Clone Library Name | barley_pub |
>OPLA_RAT (P97608) 5-oxoprolinase (EC 3.5.2.9) (5-oxo-L-prolinase)| (Pyroglutamase) (5-OPase) Length = 1288 Score = 80.1 bits (196), Expect = 2e-15 Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 1/75 (1%) Frame = +2 Query: 209 MGSVD-KFRFCIDRGGTFTDIYAEVPGEPEGYVMKLLSVDPSNYDDAPIEGIRRILEQFS 385 MGS + +F F IDRGGTFTD++A+ PG V+KLLS DP+NY DAP EGIRRILEQ Sbjct: 1 MGSPEGRFHFAIDRGGTFTDVFAQCPGG-HVRVLKLLSEDPANYADAPTEGIRRILEQEE 59 Query: 386 GERIPRSSKIPTGMI 430 G +PR + T I Sbjct: 60 GVLLPRGRPLDTSRI 74
>OPLA_MOUSE (Q8K010) 5-oxoprolinase (EC 3.5.2.9) (5-oxo-L-prolinase)| (Pyroglutamase) (5-OPase) Length = 1288 Score = 79.3 bits (194), Expect = 4e-15 Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 1/75 (1%) Frame = +2 Query: 209 MGSVD-KFRFCIDRGGTFTDIYAEVPGEPEGYVMKLLSVDPSNYDDAPIEGIRRILEQFS 385 MGS + +F F IDRGGTFTD++A+ PG V+KLLS DP+NY DAP EGIRRILEQ Sbjct: 1 MGSPEERFHFAIDRGGTFTDVFAQCPGG-HVRVLKLLSEDPANYADAPTEGIRRILEQER 59 Query: 386 GERIPRSSKIPTGMI 430 G +PR + T I Sbjct: 60 GVLLPRGRPLDTSHI 74
>OPLA_BOVIN (Q75WB5) 5-oxoprolinase (EC 3.5.2.9) (5-oxo-L-prolinase)| (Pyroglutamase) (5-OPase) Length = 1288 Score = 79.3 bits (194), Expect = 4e-15 Identities = 41/73 (56%), Positives = 49/73 (67%) Frame = +2 Query: 212 GSVDKFRFCIDRGGTFTDIYAEVPGEPEGYVMKLLSVDPSNYDDAPIEGIRRILEQFSGE 391 G +F F IDRGGTFTD++A+ PG V+KLLS DP+NY DAP EGIRRILEQ G Sbjct: 3 GPEGRFHFAIDRGGTFTDVFAQCPGG-HVRVLKLLSEDPANYVDAPTEGIRRILEQEGGV 61 Query: 392 RIPRSSKIPTGMI 430 +PR + T I Sbjct: 62 LLPRDRPLDTSRI 74
>OPLA_HUMAN (O14841) 5-oxoprolinase (EC 3.5.2.9) (5-oxo-L-prolinase)| (Pyroglutamase) (5-OPase) Length = 1288 Score = 79.0 bits (193), Expect = 5e-15 Identities = 42/75 (56%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Frame = +2 Query: 209 MGSVD-KFRFCIDRGGTFTDIYAEVPGEPEGYVMKLLSVDPSNYDDAPIEGIRRILEQFS 385 MGS + +F F IDRGGTFTD++A+ PG V+KLLS DP+NY DAP EGIRRILEQ + Sbjct: 1 MGSPEGRFHFAIDRGGTFTDVFAQCPGG-HVRVLKLLSEDPANYADAPTEGIRRILEQEA 59 Query: 386 GERIPRSSKIPTGMI 430 G +PR + + I Sbjct: 60 GMLLPRDQPLDSSHI 74
>YAOE_SCHPO (Q10093) Hypothetical protein C11D3.14c in chromosome I| Length = 1260 Score = 72.8 bits (177), Expect = 4e-13 Identities = 40/65 (61%), Positives = 47/65 (72%), Gaps = 2/65 (3%) Frame = +2 Query: 230 RFCIDRGGTFTDIYAEVPG--EPEGYVMKLLSVDPSNYDDAPIEGIRRILEQFSGERIPR 403 R IDRGGTFTD+Y ++ G E EG + KLLSV+P YDDAP EGIRR+L SGE IPR Sbjct: 6 RIAIDRGGTFTDVYYKISGWREQEG-IFKLLSVNPKLYDDAPTEGIRRVLCYASGEEIPR 64 Query: 404 SSKIP 418 K+P Sbjct: 65 --KVP 67
>YAOF_SCHPO (Q10094) Hypothetical protein C11D3.15 in chromosome I| Length = 1317 Score = 67.4 bits (163), Expect = 2e-11 Identities = 37/66 (56%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Frame = +2 Query: 239 IDRGGTFTDIYAEVPGEPEG-YVMKLLSVDPSNYDDAPIEGIRRILEQFSGERIPRSSKI 415 IDRGGTFTD A E V+KLLS DPSNY DA IE +RRILE G+ IPR+ K+ Sbjct: 7 IDRGGTFTDAIATFADESRPPIVIKLLSEDPSNYKDASIEAVRRILEIVQGKSIPRTEKL 66 Query: 416 PTGMID 433 T I+ Sbjct: 67 DTSCIN 72
>YKV5_YEAST (P28273) Hypothetical 140.4 kDa protein in URA1-DOA1 intergenic| region Length = 1286 Score = 63.5 bits (153), Expect = 2e-10 Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 2/60 (3%) Frame = +2 Query: 230 RFCIDRGGTFTDIYAEV-PGEPE-GYVMKLLSVDPSNYDDAPIEGIRRILEQFSGERIPR 403 R ID+GGTFTD + G+ E V+KLLSVDP NY DAP+EGIRR+LE + IPR Sbjct: 7 RIAIDKGGTFTDCVGNIGTGKQEHDTVIKLLSVDPKNYPDAPLEGIRRLLEVLEHKTIPR 66
>CECR6_MOUSE (Q99MX7) Cat eye syndrome critical region protein 6 homolog| Length = 572 Score = 32.0 bits (71), Expect = 0.70 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = +1 Query: 1 PTPVSTVTAARPPPPSGRRLDTYFLRLPDSRG 96 P +S+ A+ PPPP+ RL FLR SRG Sbjct: 8 PRALSSAPASFPPPPAAARLQPLFLRGGSSRG 39
>Y1464_SYNY3 (P74557) UPF0026 protein slr1464| Length = 265 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = -2 Query: 352 DRSIVVVGRVDGEELHNIAFRLAGDLGVDVGERAAPI 242 DR + + VDG+ L N+A +++G +G+ V R AP+ Sbjct: 228 DRPVTQIKCVDGQTLQNLAKKISGAIGIPV--RCAPV 262
>COBQ_THEAC (Q9HLZ8) Probable cobyric acid synthase| Length = 468 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/53 (28%), Positives = 28/53 (52%) Frame = +2 Query: 239 IDRGGTFTDIYAEVPGEPEGYVMKLLSVDPSNYDDAPIEGIRRILEQFSGERI 397 IDRGG F IY + P +++ + ++ D + +E + LE +G+R+ Sbjct: 164 IDRGGVFASIYGTLSLMPRPDLVRWIMINKMRGDASLLEPGLKKLENLTGKRV 216
>CECR6_HUMAN (Q9BXQ6) Cat eye syndrome critical region protein 6| Length = 578 Score = 30.0 bits (66), Expect = 2.7 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 1 PTPVSTVTAARPPPPSGRRLDTYFLRLPDSRG 96 P VS+ + + PPPP+ RL FLR RG Sbjct: 8 PRSVSSASGSFPPPPAAARLQPLFLRGGSFRG 39
>CENG1_RAT (Q8CGU4) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 29.6 bits (65), Expect = 3.5 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = -1 Query: 143 GRGSGERPAARRAEMVPRESGRRRK*VS--SRLPLGGGGLAAVTVDTGV 3 G+G+G R + +E PR G + + S + GGGG AAVT GV Sbjct: 203 GKGAGSRLSWPESEGKPRVKGSKSTAGTGASAVAAGGGGSAAVTTSGGV 251
>UXUA_HAEIN (P44488) Mannonate dehydratase (EC 4.2.1.8) (D-mannonate hydrolase)| Length = 394 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/51 (31%), Positives = 22/51 (43%) Frame = +2 Query: 263 DIYAEVPGEPEGYVMKLLSVDPSNYDDAPIEGIRRILEQFSGERIPRSSKI 415 +I A +PG EGY + Y D E R L F E +P + +I Sbjct: 176 NIIAGLPGAEEGYTLDEFQTQLDRYKDISSEKFRTHLAYFLNEIVPVAQEI 226
>RUVB_METCA (Q609L0) Holliday junction ATP-dependent DNA helicase ruvB (EC| 3.6.1.-) Length = 345 Score = 29.3 bits (64), Expect = 4.5 Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = +2 Query: 257 FTDIYAE--VPGEPEGYVMKLLSVDPSNYDDAPIEGIRRILEQFSG 388 F + A+ + GE G +++L VDP+ +D + + ++E+F G Sbjct: 232 FAQVMADGRITGEVAGKALEMLDVDPNGFDQSDRRLLLTMMEKFEG 277
>Y1665_CHLTE (Q8KBW7) UPF0082 protein CT1665| Length = 251 Score = 29.3 bits (64), Expect = 4.5 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 7/56 (12%) Frame = +2 Query: 245 RGGTFTDIYAEVP-------GEPEGYVMKLLSVDPSNYDDAPIEGIRRILEQFSGE 391 RG FT + E+ G+P G L++D + + P++ I+R +++ +GE Sbjct: 21 RGSLFTKLVKEITIAAKMGGGDPTGNPRLRLAIDTARANSMPMDNIQRAIKRGTGE 76
>UXUA_MANSM (Q65V66) Mannonate dehydratase (EC 4.2.1.8) (D-mannonate hydrolase)| Length = 394 Score = 28.9 bits (63), Expect = 5.9 Identities = 16/52 (30%), Positives = 24/52 (46%) Frame = +2 Query: 260 TDIYAEVPGEPEGYVMKLLSVDPSNYDDAPIEGIRRILEQFSGERIPRSSKI 415 ++I A +PG EGY ++ Y D E R L F E IP + ++ Sbjct: 175 SNIIAGLPGAEEGYTLEEFQGQLDRYKDISPEKFRTHLAYFLNEIIPVAQEV 226
>TTC15_HUMAN (Q8WVT3) Tetratricopeptide repeat protein 15 (TPR repeat protein| 15) Length = 735 Score = 28.9 bits (63), Expect = 5.9 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Frame = +1 Query: 1 PTPVSTVTAARPPPPSGRRLDTYFLRLPDSRGTISARLAAGRSP----EPLPS 147 P PV T+ + R PP SG + ++ P G A A+ R+P +P PS Sbjct: 156 PVPVCTIFSQRAPPASGDGFEPQMVKSPSFGG---ASEASARTPPQVVQPSPS 205
>SORC2_HUMAN (Q96PQ0) VPS10 domain-containing receptor SorCS2 precursor| Length = 1159 Score = 28.9 bits (63), Expect = 5.9 Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Frame = +1 Query: 1 PTPVSTVTAARPPPPSGRRLDTYFLRLPDSRGTISARLAAGRSPEP-LPSEHATSKITRI 177 PT + A PPP S R L L + A AAGRSPEP HA ++TR+ Sbjct: 15 PTARAPSPGAPPPPRSPRSRPLLLLLL-----LLGACGAAGRSPEPGRLGPHA--QLTRV 67 Query: 178 PGVLIAEEGEDG 213 P A E G Sbjct: 68 PRSPPAGRAEPG 79
>ODP2_ACHLA (P35489) Dihydrolipoyllysine-residue acetyltransferase component of| pyruvate dehydrogenase complex (EC 2.3.1.12) (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) Length = 544 Score = 28.9 bits (63), Expect = 5.9 Identities = 21/64 (32%), Positives = 29/64 (45%) Frame = -2 Query: 364 PDPLDRSIVVVGRVDGEELHNIAFRLAGDLGVDVGERAAPINAESELVHAAHLLLPPRSA 185 P P+D +IV +G +GEE+H + D G AAP A+ A P +A Sbjct: 48 PSPVDGTIVSLGAKEGEEIHVGQIIVTIDDGTGT-PAAAPAPAQVSAPTPAPAAAPQVAA 106 Query: 184 PQES 173 P S Sbjct: 107 PAAS 110
>CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 28.9 bits (63), Expect = 5.9 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = -1 Query: 143 GRGSGERPAARRAEMVPRESGRRRK*VS--SRLPLGGGGLAAVTVDTGV 3 G+G+G R + +E PR G + + S GGGG AAVT GV Sbjct: 203 GKGAGSRLSWPESEGKPRVKGSKSTAGTGASAAAAGGGGSAAVTTSGGV 251
>CMTA2_HUMAN (O94983) Calmodulin-binding transcription activator 2| Length = 1202 Score = 28.9 bits (63), Expect = 5.9 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%) Frame = +1 Query: 25 AARPPPPS----GRRLDTYFLRLPDSRGTISARLAAGRSPEPLPS 147 AAR PPP GRR + +F++ DS + AA P P PS Sbjct: 424 AARGPPPQSVAGGRRGNCFFIQDDDSGEELKGHGAAPPIPSPPPS 468
>UXUA_HAEI8 (Q4QPI9) Mannonate dehydratase (EC 4.2.1.8) (D-mannonate hydrolase)| Length = 394 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/51 (29%), Positives = 22/51 (43%) Frame = +2 Query: 263 DIYAEVPGEPEGYVMKLLSVDPSNYDDAPIEGIRRILEQFSGERIPRSSKI 415 +I A +PG EGY + Y D E R L F E +P + ++ Sbjct: 176 NIIAGLPGAEEGYTLDEFQTQLDRYKDISPEKFRTHLAYFLNEIVPVAQEV 226 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,989,614 Number of Sequences: 219361 Number of extensions: 1075576 Number of successful extensions: 4143 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3942 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4132 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
