>NRG2_RAT (O35569) Pro-neuregulin-2, membrane-bound isoform precursor|
           (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Neural- and
           thymus-derived activator for ERBB kinases) (NTAK)]
          Length = 868

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
 Frame = -3

Query: 456 RMSGRTSHGSMVATRRDHRCTAHSIHIIRP-----PPPKPSAGARSPA 328
           R S R+S GS   T       ++S  I RP     P P+P    RSPA
Sbjct: 46  RSSSRSSRGSTTTTSSSENSGSNSGSIFRPAAPPEPRPQPQPQPRSPA 93

>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150)
            (Fragment)
          Length = 1324

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 429  SMVATRRDHRCTAHSIHIIRPPPPKPSAGARSPAP 325
            ++ AT+   + ++ ++   RPPPP+P A    PAP
Sbjct: 1088 TLPATQLQQKDSSQTLEPKRPPPPRPVAPPARPAP 1122

>NCOA2_RAT (Q9WUI9) Nuclear receptor coactivator 2 (NCoA-2) (Transcriptional|
           intermediary factor 2)
          Length = 1465

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 9/37 (24%), Positives = 22/37 (59%)
 Frame = +2

Query: 11  EERGKNRRKLNNPRGEARVFAMATAHLELLHPSPIPN 121
           E+R +   +L+  +G+ ++  + T   + + PSP+P+
Sbjct: 623 EDRAEGHSRLHESKGQTKLLQLLTTKSDQMEPSPLPS 659

>PAN1_YEAST (P32521) Protein PAN1|
          Length = 1480

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/61 (22%), Positives = 31/61 (50%)
 Frame = +2

Query: 2    WQEEERGKNRRKLNNPRGEARVFAMATAHLELLHPSPIPNLS*SKADPLPPRISHPRESA 181
            W +E+   NR  ++N   EA++     A    +  +P+P+++     P+PP +  P+ + 
Sbjct: 1280 WSDEDESNNRVAVDNKVEEAKIGHPDHARAPPVTAAPLPSVT-----PVPPAVPVPQANT 1334

Query: 182  A 184
            +
Sbjct: 1335 S 1335

>SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1575

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -3

Query: 372  RPPPPKPSAGARSPAPT 322
            RPPPP   +GARSPAPT
Sbjct: 1125 RPPPP---SGARSPAPT 1138


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,724,211
Number of Sequences: 219361
Number of extensions: 619510
Number of successful extensions: 3788
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3738
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)