ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl26h02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
3dbj|AK068644.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 168 1e-38
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 168 1e-38
6emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa... 168 1e-38
7emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769... 168 1e-38
8gb|AC122587.5| Rattus norvegicus BAC CH230-173H6 (Children's Ho... 46 0.10
9gb|AC126938.2| Mus musculus BAC clone RP23-50I16 from chromosome... 44 0.41
10emb|AL445529.14| Human DNA sequence from clone RP11-793K1 on chr... 44 0.41
11gb|AC128709.6| Homo sapiens 3 BAC RP13-616I3 (Roswell Park Cance... 44 0.41
12ref|NM_006160.2| Homo sapiens neurogenic differentiation 2 (NEUR... 42 1.6
13emb|BX088650.9| Human DNA sequence from clone DASS-97D12 on chro... 42 1.6
14emb|AL662799.16| Human DNA sequence from clone XXbac-294E21 on c... 42 1.6
15emb|AL356305.11| Human DNA sequence from clone RP11-109K20 on ch... 42 1.6
16emb|AL050332.15|HSDJ570F3 Human DNA sequence from clone RP4-570F... 42 1.6
17emb|CR954985.1| Human DNA sequence from clone XX-HCC1954_35K08, ... 42 1.6
18gb|BC022481.1| Homo sapiens neurogenic differentiation 2, mRNA (... 42 1.6
19emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
20gb|AC087491.5| Homo sapiens chromosome 17, clone RP11-62N23, com... 42 1.6
21emb|CR624963.1| full-length cDNA clone CS0DF008YN08 of Fetal bra... 42 1.6
22emb|CR590531.1| full-length cDNA clone CS0DF027YM01 of Fetal bra... 42 1.6
23dbj|AB224102.1| Aspergillus oryzae cDNA, contig sequence: AoEST0944 42 1.6
24dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 42 1.6
25dbj|AB021742.1| Homo sapiens NDRF mRNA for neuroD-related factor... 42 1.6
26dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
27gb|U58681.1|HSU58681 Homo sapiens neurogenic basic-helix-loop-he... 42 1.6
28gb|L24391.1|ASTDBP Arena sativa DNA binding protein (PF-1) mRNA,... 42 1.6
29gb|BT020513.1| Arabidopsis thaliana At5g24520 gene, complete cds 40 6.3
30ref|NM_122360.2| Arabidopsis thaliana TTG1 (TRANSPARENT TESTA GL... 40 6.3
31ref|NM_180739.2| Arabidopsis thaliana TTG1 (TRANSPARENT TESTA GL... 40 6.3
32ref|NM_180738.2| Arabidopsis thaliana TTG1 (TRANSPARENT TESTA GL... 40 6.3
33gb|BT020231.1| Arabidopsis thaliana At5g24520 gene, complete cds 40 6.3
34gb|AC150788.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
35gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 40 6.3
36gb|AC113983.13| Mus musculus chromosome 5, clone RP24-95M11, com... 40 6.3
37ref|XM_607249.2| PREDICTED: Bos taurus similar to Neurogenic dif... 40 6.3
38gb|AC134341.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
39gb|BT011856.1| Arabidopsis thaliana At5g24520 mRNA sequence 40 6.3
40ref|XM_751925.1| Ustilago maydis 521 hypothetical protein (UM008... 40 6.3
41ref|XM_389862.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 6.3
42gb|AC121986.2| Mus musculus BAC clone RP24-293I7 from 10, comple... 40 6.3
43ref|XM_760877.1| Theileria parva strain Muguga chromosome 1 hypo... 40 6.3
44gb|AC148178.35| Medicago truncatula clone mth2-5b21, complete se... 40 6.3
45emb|AL606497.4| Human DNA sequence from clone RP13-35O24 on chro... 40 6.3
46emb|AL513013.12| Human DNA sequence from clone RP5-990P15 on chr... 40 6.3
47emb|AL355520.8| Human DNA sequence from clone RP4-595C2 on chrom... 40 6.3
48emb|AL136111.10| Human DNA sequence from clone RP13-73G13 on chr... 40 6.3
49gb|AC157990.4| Mus musculus chromosome 5, clone RP24-307I24, com... 40 6.3
50gb|AC182032.3| Spermophilus tridecemlineatus clone VMRC20-712F8,... 40 6.3
51emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4,... 40 6.3
52dbj|BS000648.1| Pan troglodytes chromosome Y clone:PTB-526G10, c... 40 6.3
53emb|AJ586862.1| Matthiola incana partial ttg1 gene for transpare... 40 6.3
54emb|AJ586861.1| Matthiola incana partial ttg1 gene for transpare... 40 6.3
55gb|AC146691.5| Macaca mulatta clone ch250-214a10, complete sequence 40 6.3
56dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 40 6.3
57gb|AY013285.1| Meloidogyne artiellia chitin synthase gene, compl... 40 6.3
58dbj|AK048555.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 6.3
59dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
60dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
61dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
62dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
63emb|AL606603.3|OSJN00040 Oryza sativa genomic DNA, chromosome 4,... 40 6.3
64emb|BX830220.1|CNS0A18T Arabidopsis thaliana Full-length cDNA Co... 40 6.3
65emb|BX832324.1|CNS0A158 Arabidopsis thaliana Full-length cDNA Co... 40 6.3
66emb|BX831455.1|CNS0A0UO Arabidopsis thaliana Full-length cDNA Co... 40 6.3
67emb|BX831165.1|CNS0A0UA Arabidopsis thaliana Full-length cDNA Co... 40 6.3
68emb|BX830656.1|CNS0A0Q5 Arabidopsis thaliana Full-length cDNA Co... 40 6.3
69dbj|AB117764.1| Arabidopsis thaliana AT5G24520.1 gene for mutant... 40 6.3
70dbj|AB117763.1| Arabidopsis thaliana AT5G24520.1 gene for mutant... 40 6.3
71dbj|AB117762.1| Arabidopsis thaliana AT5G24520.1 gene for mutant... 40 6.3
72dbj|AB117761.1| Arabidopsis thaliana AT5G24520.1 gene for mutant... 40 6.3
73gb|AC115775.12| Mus musculus chromosome 8, clone RP23-125P1, com... 40 6.3
74gb|AC011305.2|AC011305 Homo sapiens BAC clone RP11-390E9 from Y,... 40 6.3
75dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
76dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
77dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
78dbj|AP006452.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
79dbj|AB010068.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.3
80ref|XM_561521.1| Anopheles gambiae str. PEST ENSANGP00000028107 ... 40 6.3
81emb|AJ251523.1|ATH251523 Arabidopsis thaliana ecotype Estland tt... 40 6.3
82emb|AJ251522.1|ATH251522 Arabidopsis thaliana ecotype Estland TT... 40 6.3
83emb|AJ133743.1|ATH133743 Arabidopsis thaliana ttg1 gene 40 6.3
84gb|AC109163.16| Mus musculus chromosome 8, clone RP24-174F12, co... 40 6.3
85dbj|D90360.1|MUSCYTK Mus musculus gene for cytokeratin endo A, c... 40 6.3
86emb|AL928594.11| Mouse DNA sequence from clone RP23-35H8 on chro... 40 6.3
87emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.3
88emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4,... 40 6.3
89emb|AJ875188.1| Malcolmia flexuosa subsp. naxensis partial ttg1 ... 40 6.3
90emb|AJ875187.1| Matthiola tricuspidata partial ttg1 gene for tra... 40 6.3
91emb|AL732478.7| Mouse DNA sequence from clone RP23-42N14 on chro... 40 6.3

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score =  168 bits (85), Expect = 1e-38
 Identities = 96/100 (96%)
 Strand = Plus / Plus

                                                                          
Query: 371    cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 430
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644700 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 644759

                                                      
Query: 431    ccgtggctcgtcctnccgctcatcctcctctgggcgctct 470
              || ||||| || || |||||||||||||||||||||||||
Sbjct: 644760 ccatggctggtgctcccgctcatcctcctctgggcgctct 644799



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 59     gctagggttttcgccatggccaccgcccacc 89
              |||||||||||||||||||| ||| ||||||
Sbjct: 644399 gctagggttttcgccatggctaccacccacc 644429



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 49       gagaggagaagctagggttt 68
                ||||||||||||||||||||
Sbjct: 11515386 gagaggagaagctagggttt 11515367



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score =  168 bits (85), Expect = 1e-38
 Identities = 96/100 (96%)
 Strand = Plus / Plus

                                                                          
Query: 371    cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 430
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608951 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 609010

                                                      
Query: 431    ccgtggctcgtcctnccgctcatcctcctctgggcgctct 470
              || ||||| || || |||||||||||||||||||||||||
Sbjct: 609011 ccatggctggtgctcccgctcatcctcctctgggcgctct 609050



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 59     gctagggttttcgccatggccaccgcccacc 89
              |||||||||||||||||||| ||| ||||||
Sbjct: 608650 gctagggttttcgccatggctaccacccacc 608680



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>dbj|AK068644.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158J09, full
           insert sequence
          Length = 3185

 Score =  168 bits (85), Expect = 1e-38
 Identities = 96/100 (96%)
 Strand = Plus / Plus

                                                                       
Query: 371 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 390

                                                   
Query: 431 ccgtggctcgtcctnccgctcatcctcctctgggcgctct 470
           || ||||| || || |||||||||||||||||||||||||
Sbjct: 391 ccatggctggtgctcccgctcatcctcctctgggcgctct 430



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 59 gctagggttttcgccatggccaccgcccacc 89
          |||||||||||||||||||| ||| ||||||
Sbjct: 30 gctagggttttcgccatggctaccacccacc 60



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  168 bits (85), Expect = 1e-38
 Identities = 96/100 (96%)
 Strand = Plus / Plus

                                                                          
Query: 371    cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 430
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608951 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 609010

                                                      
Query: 431    ccgtggctcgtcctnccgctcatcctcctctgggcgctct 470
              || ||||| || || |||||||||||||||||||||||||
Sbjct: 609011 ccatggctggtgctcccgctcatcctcctctgggcgctct 609050



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 59     gctagggttttcgccatggccaccgcccacc 89
              |||||||||||||||||||| ||| ||||||
Sbjct: 608650 gctagggttttcgccatggctaccacccacc 608680



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  168 bits (85), Expect = 1e-38
 Identities = 96/100 (96%)
 Strand = Plus / Plus

                                                                          
Query: 371    cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 430
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644700 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 644759

                                                      
Query: 431    ccgtggctcgtcctnccgctcatcctcctctgggcgctct 470
              || ||||| || || |||||||||||||||||||||||||
Sbjct: 644760 ccatggctggtgctcccgctcatcctcctctgggcgctct 644799



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 59     gctagggttttcgccatggccaccgcccacc 89
              |||||||||||||||||||| ||| ||||||
Sbjct: 644399 gctagggttttcgccatggctaccacccacc 644429



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 49       gagaggagaagctagggttt 68
                ||||||||||||||||||||
Sbjct: 11515057 gagaggagaagctagggttt 11515038



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>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 181322

 Score =  168 bits (85), Expect = 1e-38
 Identities = 96/100 (96%)
 Strand = Plus / Minus

                                                                          
Query: 371    cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 430
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134021 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 133962

                                                      
Query: 431    ccgtggctcgtcctnccgctcatcctcctctgggcgctct 470
              || ||||| || || |||||||||||||||||||||||||
Sbjct: 133961 ccatggctggtgctcccgctcatcctcctctgggcgctct 133922



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 59     gctagggttttcgccatggccaccgcccacc 89
              |||||||||||||||||||| ||| ||||||
Sbjct: 134322 gctagggttttcgccatggctaccacccacc 134292



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>emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769_D07 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 115859

 Score =  168 bits (85), Expect = 1e-38
 Identities = 96/100 (96%)
 Strand = Plus / Minus

                                                                        
Query: 371  cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 430
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4143 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 4084

                                                    
Query: 431  ccgtggctcgtcctnccgctcatcctcctctgggcgctct 470
            || ||||| || || |||||||||||||||||||||||||
Sbjct: 4083 ccatggctggtgctcccgctcatcctcctctgggcgctct 4044



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 59   gctagggttttcgccatggccaccgcccacc 89
            |||||||||||||||||||| ||| ||||||
Sbjct: 4444 gctagggttttcgccatggctaccacccacc 4414



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>gb|AC122587.5| Rattus norvegicus  BAC CH230-173H6 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 202972

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 98    ctccacccctcccccattcccaa 120
             |||||||||||||||||||||||
Sbjct: 80196 ctccacccctcccccattcccaa 80174



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>gb|AC126938.2| Mus musculus BAC clone RP23-50I16 from chromosome 5, complete sequence
          Length = 187269

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 6      aagaagaagaaagggggaaaaa 27
              ||||||||||||||||||||||
Sbjct: 162806 aagaagaagaaagggggaaaaa 162827



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>emb|AL445529.14| Human DNA sequence from clone RP11-793K1 on chromosome 6 Cpntains a
             ribosomal protein S15a (RPS15A) pseudogene, complete
             sequence
          Length = 76336

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 6     aagaagaagaaagggggaaaaa 27
             ||||||||||||||||||||||
Sbjct: 32858 aagaagaagaaagggggaaaaa 32837



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>gb|AC128709.6| Homo sapiens 3 BAC RP13-616I3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 163031

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 88    cctcgagctcctccacccctccccca 113
             |||| |||||||||||||||||||||
Sbjct: 42135 cctccagctcctccacccctccccca 42110



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>ref|NM_006160.2| Homo sapiens neurogenic differentiation 2 (NEUROD2), mRNA
          Length = 2019

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 101  cacccctcccccattcccaat 121
            |||||||||||||||||||||
Sbjct: 1635 cacccctcccccattcccaat 1655



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>emb|BX088650.9| Human DNA sequence from clone DASS-97D12 on chromosome 6, complete
             sequence
          Length = 92518

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 3     ggcaagaagaagaaaggggga 23
             |||||||||||||||||||||
Sbjct: 46044 ggcaagaagaagaaaggggga 46024



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>emb|AL662799.16| Human DNA sequence from clone XXbac-294E21 on chromosome 6 contains the
             gene for a novel protein similar to lysophospholipase II
             (LYPLA2), the KNSL2 gene for kinesin-like 2, the PHF1 gene
             for PHD finger protein 1, the gene for divalent cation
             tolerant protein CUTA, the SYNGAP1 gene for synaptic Ras
             GTPase activating protein 1 homolog and five CpG islands,
             complete sequence
          Length = 136021

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 3     ggcaagaagaagaaaggggga 23
             |||||||||||||||||||||
Sbjct: 86439 ggcaagaagaagaaaggggga 86419



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>emb|AL356305.11| Human DNA sequence from clone RP11-109K20 on chromosome 13, complete
              sequence
          Length = 132436

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 10     agaagaaagggggaaaaatcg 30
              |||||||||||||||||||||
Sbjct: 126932 agaagaaagggggaaaaatcg 126912



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>emb|AL050332.15|HSDJ570F3 Human DNA sequence from clone RP4-570F3 on chromosome 6 Contains the 5'
             end of the SYNGAP1 gene for synaptic Ras GTPase activating
             protein 1 homolog (rat), gene LOC51596 for divalent cation
             tolerant protein CUTA or brain acetylcholinesterase
             putative membrane anchor, the PHF1 gene for PHD finger
             protein 1, the KNSL2 gene for kinesin-like protein 2, a
             ribosomal protein L12 pseudogene (RPL12P1), a
             lysophospholipase II (LYPLA2) pseudogene and four CpG
             islands, complete sequence
          Length = 94770

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     ggcaagaagaagaaaggggga 23
             |||||||||||||||||||||
Sbjct: 11560 ggcaagaagaagaaaggggga 11580



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>emb|CR954985.1| Human DNA sequence from clone XX-HCC1954_35K08, complete sequence
          Length = 164576

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 101    cacccctcccccattcccaat 121
              |||||||||||||||||||||
Sbjct: 132260 cacccctcccccattcccaat 132240



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>gb|BC022481.1| Homo sapiens neurogenic differentiation 2, mRNA (cDNA clone MGC:26304
            IMAGE:4816285), complete cds
          Length = 2019

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 101  cacccctcccccattcccaat 121
            |||||||||||||||||||||
Sbjct: 1635 cacccctcccccattcccaat 1655



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>emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0086G13,
              complete sequence
          Length = 127952

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 6      aagaagaagaaagggggaaaa 26
              |||||||||||||||||||||
Sbjct: 103477 aagaagaagaaagggggaaaa 103497



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>gb|AC087491.5| Homo sapiens chromosome 17, clone RP11-62N23, complete sequence
          Length = 157216

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   cacccctcccccattcccaat 121
             |||||||||||||||||||||
Sbjct: 35763 cacccctcccccattcccaat 35743



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>emb|CR624963.1| full-length cDNA clone CS0DF008YN08 of Fetal brain of Homo sapiens
            (human)
          Length = 1938

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 101  cacccctcccccattcccaat 121
            |||||||||||||||||||||
Sbjct: 1586 cacccctcccccattcccaat 1606



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>emb|CR590531.1| full-length cDNA clone CS0DF027YM01 of Fetal brain of Homo sapiens
            (human)
          Length = 1950

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 101  cacccctcccccattcccaat 121
            |||||||||||||||||||||
Sbjct: 1617 cacccctcccccattcccaat 1637



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>dbj|AB224102.1| Aspergillus oryzae cDNA, contig sequence: AoEST0944
          Length = 971

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 7   agaagaagaaagggggaaaaa 27
           |||||||||||||||||||||
Sbjct: 577 agaagaagaaagggggaaaaa 557



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>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 7       agaagaagaaagggggaaaaa 27
               |||||||||||||||||||||
Sbjct: 1785024 agaagaagaaagggggaaaaa 1785004



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>dbj|AB021742.1| Homo sapiens NDRF mRNA for neuroD-related factor, complete cds
          Length = 6246

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 101  cacccctcccccattcccaat 121
            |||||||||||||||||||||
Sbjct: 4613 cacccctcccccattcccaat 4633



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 6        aagaagaagaaagggggaaaa 26
                |||||||||||||||||||||
Sbjct: 21668935 aagaagaagaaagggggaaaa 21668955



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 49       gagaggagaagctagggttt 68
                ||||||||||||||||||||
Sbjct: 32356511 gagaggagaagctagggttt 32356492



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 49       gagaggagaagctagggttt 68
                ||||||||||||||||||||
Sbjct: 32091148 gagaggagaagctagggttt 32091129



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 49      gagaggagaagctagggttt 68
               ||||||||||||||||||||
Sbjct: 4339930 gagaggagaagctagggttt 4339911



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>gb|U58681.1|HSU58681 Homo sapiens neurogenic basic-helix-loop-helix protein (NeuroD2)
            gene, complete cds
          Length = 1550

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 101  cacccctcccccattcccaat 121
            |||||||||||||||||||||
Sbjct: 1491 cacccctcccccattcccaat 1511



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>gb|L24391.1|ASTDBP Arena sativa DNA binding protein (PF-1) mRNA, complete cds
          Length = 960

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 350 gagggctttggcggcggcggt 370
           |||||||||||||||||||||
Sbjct: 408 gagggctttggcggcggcggt 388



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>gb|BT020513.1| Arabidopsis thaliana At5g24520 gene, complete cds
          Length = 1026

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 550 ggagaagctagggttttcgc 569



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>ref|NM_122360.2| Arabidopsis thaliana TTG1 (TRANSPARENT TESTA GLABRA 1); nucleotide
           binding AT5G24520 (TTG1) transcript variant AT5G24520.3
           mRNA, complete cds
          Length = 1491

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 664 ggagaagctagggttttcgc 683



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>ref|NM_180739.2| Arabidopsis thaliana TTG1 (TRANSPARENT TESTA GLABRA 1); nucleotide
           binding AT5G24520 (TTG1) transcript variant AT5G24520.2
           mRNA, complete cds
          Length = 1436

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 664 ggagaagctagggttttcgc 683



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>ref|NM_180738.2| Arabidopsis thaliana TTG1 (TRANSPARENT TESTA GLABRA 1); nucleotide
           binding AT5G24520 (TTG1) transcript variant AT5G24520.1
           mRNA, complete cds
          Length = 1561

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 664 ggagaagctagggttttcgc 683



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>gb|BT020231.1| Arabidopsis thaliana At5g24520 gene, complete cds
          Length = 1254

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 604 ggagaagctagggttttcgc 623



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>gb|AC150788.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0073C10, complete sequence
          Length = 165350

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   gagaggagaagctagggttt 68
            ||||||||||||||||||||
Sbjct: 3686 gagaggagaagctagggttt 3667



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>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
             SNF2P genes, complete cds; nucellin pseudogene, complete
             sequence; putative transposase, phosphatidylinositol
             phosphatidylcholine transfer protein sec14 cytosolic-like
             protein, and phytochrome P450-like protein genes, complete
             cds; and unknown genes
          Length = 438828

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   ggcgctggcgatcgagctcc 345
             ||||||||||||||||||||
Sbjct: 25791 ggcgctggcgatcgagctcc 25810



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>gb|AC113983.13| Mus musculus chromosome 5, clone RP24-95M11, complete sequence
          Length = 198590

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 92    gagctcctccacccctcccccatt 115
             |||||||||| |||||||||||||
Sbjct: 27333 gagctcctcctcccctcccccatt 27310



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>ref|XM_607249.2| PREDICTED: Bos taurus similar to Neurogenic differentiation factor 2
            (NeuroD2) (Brain bHLH protein KW8) (LOC528817), mRNA
          Length = 1793

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  acccctcccccattcccaat 121
            ||||||||||||||||||||
Sbjct: 1440 acccctcccccattcccaat 1459



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>gb|AC134341.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0027N19,
              complete sequence
          Length = 141368

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     gagaggagaagctagggttt 68
              ||||||||||||||||||||
Sbjct: 126729 gagaggagaagctagggttt 126710



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>gb|BT011856.1| Arabidopsis thaliana At5g24520 mRNA sequence
          Length = 1023

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 547 ggagaagctagggttttcgc 566



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>ref|XM_751925.1| Ustilago maydis 521 hypothetical protein (UM00871.1) partial mRNA
          Length = 3090

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 57   aagctagggttttcgccatg 76
            ||||||||||||||||||||
Sbjct: 3065 aagctagggttttcgccatg 3084



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>ref|XM_389862.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09686.1)
            partial mRNA
          Length = 2094

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 404  tggtcgcggcgcgtcgccaccatg 427
            ||||||||||||| ||||||||||
Sbjct: 1992 tggtcgcggcgcgccgccaccatg 1969



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>gb|AC121986.2| Mus musculus BAC clone RP24-293I7 from 10, complete sequence
          Length = 182686

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      gaagaagaaagggggaaaaa 27
              ||||||||||||||||||||
Sbjct: 131113 gaagaagaaagggggaaaaa 131094



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>ref|XM_760877.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
           (TP01_0443) partial mRNA
          Length = 798

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 26  aatcgaaggaaattaaacaa 45
           ||||||||||||||||||||
Sbjct: 635 aatcgaaggaaattaaacaa 654



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>gb|AC148178.35| Medicago truncatula clone mth2-5b21, complete sequence
          Length = 115185

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    gaaagggggaaaaatcgaaggaaa 37
             ||||||||||||||| ||||||||
Sbjct: 16556 gaaagggggaaaaatagaaggaaa 16579



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>emb|AL606497.4| Human DNA sequence from clone RP13-35O24 on chromosome X, complete
           sequence
          Length = 8223

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 6   aagaagaagaaagggggaaa 25
           ||||||||||||||||||||
Sbjct: 217 aagaagaagaaagggggaaa 198



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>emb|AL513013.12| Human DNA sequence from clone RP5-990P15 on chromosome 1 Contains the
             5' end of a novel gene, a novel gene (DKFZp564J047), two
             novel genes and a CpG island, complete sequence
          Length = 77001

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 4     gcaagaagaagaaagggggaaaaa 27
             ||||||| ||||||||||||||||
Sbjct: 74522 gcaagaaaaagaaagggggaaaaa 74499



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>emb|AL355520.8| Human DNA sequence from clone RP4-595C2 on chromosome 1q24.1-25.3
              Contains the 3' end of the gene for Ral-A exchange factor
              RalGPS2 and the ANGPTL1 gene for angiopoietin-like 1,
              complete sequence
          Length = 157575

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      gaagaagaaagggggaaaaa 27
              ||||||||||||||||||||
Sbjct: 121477 gaagaagaaagggggaaaaa 121496



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>emb|AL136111.10| Human DNA sequence from clone RP13-73G13 on chromosome X Contains GSSs,
             complete sequence
          Length = 68759

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     aagaagaagaaagggggaaa 25
             ||||||||||||||||||||
Sbjct: 66976 aagaagaagaaagggggaaa 66957



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>gb|AC157990.4| Mus musculus chromosome 5, clone RP24-307I24, complete sequence
          Length = 153860

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 3      ggcaagaagaagaaagggggaaaa 26
              ||||||||||||| ||||||||||
Sbjct: 129763 ggcaagaagaagagagggggaaaa 129786



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>gb|AC182032.3| Spermophilus tridecemlineatus clone VMRC20-712F8, complete sequence
          Length = 172253

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     gaagaagaaagggggaaaaa 27
             ||||||||||||||||||||
Sbjct: 19127 gaagaagaaagggggaaaaa 19108



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>emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L09,
              complete sequence
          Length = 159502

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     gagaggagaagctagggttt 68
              ||||||||||||||||||||
Sbjct: 126094 gagaggagaagctagggttt 126075



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>dbj|BS000648.1| Pan troglodytes chromosome Y clone:PTB-526G10, complete sequences
          Length = 135606

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      aagaagaagaaagggggaaa 25
              ||||||||||||||||||||
Sbjct: 122601 aagaagaagaaagggggaaa 122582



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>emb|AJ586862.1| Matthiola incana partial ttg1 gene for transparenta testa glabra 1
           protein, exons 1-2, strain 17
          Length = 1981

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 340 ggagaagctagggttttcgc 359



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>emb|AJ586861.1| Matthiola incana partial ttg1 gene for transparenta testa glabra 1
           protein, exons 1-2, strain 04
          Length = 2155

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 514 ggagaagctagggttttcgc 533



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>gb|AC146691.5| Macaca mulatta clone ch250-214a10, complete sequence
          Length = 152056

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 9      aagaagaaagggggaaaaatcgaaggaa 36
              |||||||||||| ||||||| |||||||
Sbjct: 126062 aagaagaaagggagaaaaatggaaggaa 126035



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>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     gaaaaatcgaaggaaattaa 41
              ||||||||||||||||||||
Sbjct: 468690 gaaaaatcgaaggaaattaa 468671



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>gb|AY013285.1| Meloidogyne artiellia chitin synthase gene, complete cds
          Length = 11155

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 6    aagaagaagaaagggggaaa 25
            ||||||||||||||||||||
Sbjct: 3065 aagaagaagaaagggggaaa 3084



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>dbj|AK048555.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130073J24 product:unclassifiable, full
            insert sequence
          Length = 3914

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 95   ctcctccacccctcccccattccc 118
            |||||||| |||||||||||||||
Sbjct: 2394 ctcctccatccctcccccattccc 2417



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 49       gagaggagaagctagggttt 68
                ||||||||||||||||||||
Sbjct: 28874151 gagaggagaagctagggttt 28874170



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 49      gagaggagaagctagggttt 68
               ||||||||||||||||||||
Sbjct: 3805799 gagaggagaagctagggttt 3805780



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 49       gagaggagaagctagggttt 68
                ||||||||||||||||||||
Sbjct: 25262971 gagaggagaagctagggttt 25262990



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 49       gagaggagaagctagggttt 68
                ||||||||||||||||||||
Sbjct: 25566120 gagaggagaagctagggttt 25566101



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>emb|AL606603.3|OSJN00040 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050N09,
             complete sequence
          Length = 127117

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    gagaggagaagctagggttt 68
             ||||||||||||||||||||
Sbjct: 87798 gagaggagaagctagggttt 87779



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>emb|BX830220.1|CNS0A18T Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB66ZG10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1346

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 643 ggagaagctagggttttcgc 662



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>emb|BX832324.1|CNS0A158 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH65ZH07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1284

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 625 ggagaagctagggttttcgc 644



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>emb|BX831455.1|CNS0A0UO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS92ZD04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1386

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 635 ggagaagctagggttttcgc 654



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>emb|BX831165.1|CNS0A0UA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS63ZD03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1303

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 627 ggagaagctagggttttcgc 646



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>emb|BX830656.1|CNS0A0Q5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS10ZE09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1307

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 632 ggagaagctagggttttcgc 651



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>dbj|AB117764.1| Arabidopsis thaliana AT5G24520.1 gene for mutant protein of TTG1,
            complete cds, allele: ttg1-26
          Length = 2753

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   ggagaagctagggttttcgc 72
            ||||||||||||||||||||
Sbjct: 1355 ggagaagctagggttttcgc 1374



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>dbj|AB117763.1| Arabidopsis thaliana AT5G24520.1 gene for mutant protein of TTG1,
            complete cds, allele: ttg1-25
          Length = 2752

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   ggagaagctagggttttcgc 72
            ||||||||||||||||||||
Sbjct: 1356 ggagaagctagggttttcgc 1375



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>dbj|AB117762.1| Arabidopsis thaliana AT5G24520.1 gene for mutant protein of TTG1,
            complete cds, allele: ttg1-24
          Length = 2749

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   ggagaagctagggttttcgc 72
            ||||||||||||||||||||
Sbjct: 1351 ggagaagctagggttttcgc 1370



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>dbj|AB117761.1| Arabidopsis thaliana AT5G24520.1 gene for mutant protein of TTG1,
            complete cds, allele: ttg1-23
          Length = 2753

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   ggagaagctagggttttcgc 72
            ||||||||||||||||||||
Sbjct: 1355 ggagaagctagggttttcgc 1374



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>gb|AC115775.12| Mus musculus chromosome 8, clone RP23-125P1, complete sequence
          Length = 189510

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    aagaagaagaaagggggaaa 25
            ||||||||||||||||||||
Sbjct: 4999 aagaagaagaaagggggaaa 4980



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>gb|AC011305.2|AC011305 Homo sapiens BAC clone RP11-390E9 from Y, complete sequence
          Length = 69485

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     aagaagaagaaagggggaaa 25
             ||||||||||||||||||||
Sbjct: 42168 aagaagaagaaagggggaaa 42149



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>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0004A09
          Length = 158826

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    gagaggagaagctagggttt 68
             ||||||||||||||||||||
Sbjct: 12926 gagaggagaagctagggttt 12907



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>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0696E01
          Length = 194056

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    gagaggagaagctagggttt 68
             ||||||||||||||||||||
Sbjct: 93723 gagaggagaagctagggttt 93704



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>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0468G03
          Length = 143918

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    gagaggagaagctagggttt 68
             ||||||||||||||||||||
Sbjct: 24195 gagaggagaagctagggttt 24214



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>dbj|AP006452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1250G12
          Length = 144590

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    gagaggagaagctagggttt 68
             ||||||||||||||||||||
Sbjct: 30122 gagaggagaagctagggttt 30141



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>dbj|AB010068.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18P6
          Length = 74589

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   ggagaagctagggttttcgc 72
            ||||||||||||||||||||
Sbjct: 6549 ggagaagctagggttttcgc 6530



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>ref|XM_561521.1| Anopheles gambiae str. PEST ENSANGP00000028107 (ENSANGG00000022232),
            partial mRNA
          Length = 1680

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   ccacctcgagctcctccacc 104
            ||||||||||||||||||||
Sbjct: 1397 ccacctcgagctcctccacc 1416



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>emb|AJ251523.1|ATH251523 Arabidopsis thaliana ecotype Estland ttg1 gene for transparent
           testa glabra 1, exons 1-2 hlm mutant allele
          Length = 2051

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 646 ggagaagctagggttttcgc 665



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>emb|AJ251522.1|ATH251522 Arabidopsis thaliana ecotype Estland TTG1 gene for transparent
           testa glabra 1, exons 1-2 wild type allele
          Length = 2034

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 629 ggagaagctagggttttcgc 648



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>emb|AJ133743.1|ATH133743 Arabidopsis thaliana ttg1 gene
          Length = 5777

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   ggagaagctagggttttcgc 72
            ||||||||||||||||||||
Sbjct: 3930 ggagaagctagggttttcgc 3949



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>gb|AC109163.16| Mus musculus chromosome 8, clone RP24-174F12, complete sequence
          Length = 189849

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      aagaagaagaaagggggaaa 25
              ||||||||||||||||||||
Sbjct: 162612 aagaagaagaaagggggaaa 162593



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>dbj|D90360.1|MUSCYTK Mus musculus gene for cytokeratin endo A, complete cds
          Length = 10247

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 100  ccacccctcccccattccca 119
            ||||||||||||||||||||
Sbjct: 7372 ccacccctcccccattccca 7353



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>emb|AL928594.11| Mouse DNA sequence from clone RP23-35H8 on chromosome X, complete
             sequence
          Length = 204635

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     gaagaagaaagggggaaaaa 27
             ||||||||||||||||||||
Sbjct: 21375 gaagaagaaagggggaaaaa 21356



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>emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa0054O08 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 167806

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    gagaggagaagctagggttt 68
             ||||||||||||||||||||
Sbjct: 21578 gagaggagaagctagggttt 21597



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>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06,
              complete sequence
          Length = 141752

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     gagaggagaagctagggttt 68
              ||||||||||||||||||||
Sbjct: 111855 gagaggagaagctagggttt 111836



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>emb|AJ875188.1| Malcolmia flexuosa subsp. naxensis partial ttg1 gene for
           transparent testa glabra protein 1
          Length = 737

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 319 ggagaagctagggttttcgc 338



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>emb|AJ875187.1| Matthiola tricuspidata partial ttg1 gene for transparent testa
           glabra 1 protein
          Length = 737

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  ggagaagctagggttttcgc 72
           ||||||||||||||||||||
Sbjct: 319 ggagaagctagggttttcgc 338



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>emb|AL732478.7| Mouse DNA sequence from clone RP23-42N14 on chromosome 2, complete
             sequence
          Length = 203434

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 95    ctcctccacccctcccccattccc 118
             |||||||| |||||||||||||||
Sbjct: 66540 ctcctccatccctcccccattccc 66563


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,577,838
Number of Sequences: 3902068
Number of extensions: 4577838
Number of successful extensions: 87908
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87012
Number of HSP's gapped (non-prelim): 896
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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