Clone Name | bastl26h01 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|AY483155.1| Hordeum vulgare putative cellulose synthase catal... | 151 | 8e-34 | 2 | gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... | 38 | 8.3 |
---|
>gb|AY483155.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA6) mRNA, complete cds Length = 3745 Score = 151 bits (76), Expect = 8e-34 Identities = 76/76 (100%) Strand = Plus / Plus Query: 12 gagctccgagagtagttcttctccctctcgagagccagctcgcgggggatctgggaatgg 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23 gagctccgagagtagttcttctccctctcgagagccagctcgcgggggatctgggaatgg 82 Query: 72 tgcccatctccgccga 87 |||||||||||||||| Sbjct: 83 tgcccatctccgccga 98 Score = 119 bits (60), Expect = 3e-24 Identities = 63/64 (98%) Strand = Plus / Plus Query: 107 cgccggatctagagcggccttcccgtgcccctctcgactgaagcgagcgagagtccgccg 166 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 118 cgccggatctagagcggccttcccgtgcccctctcgactgaagcgagcgagaggccgccg 177 Query: 167 ccgg 170 |||| Sbjct: 178 ccgg 181
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 37 tctcgagagccagctcgcggggg 59 ||||||| ||||||||||||||| Sbjct: 541589 tctcgagcgccagctcgcggggg 541567 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 731,283 Number of Sequences: 3902068 Number of extensions: 731283 Number of successful extensions: 47872 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47858 Number of HSP's gapped (non-prelim): 14 length of query: 170 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 148 effective length of database: 17,147,199,772 effective search space: 2537785566256 effective search space used: 2537785566256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)