ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl26g12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PHF15_HUMAN (Q9NQC1) PHD finger protein 15 31 1.1
2DUS15_HUMAN (Q9H1R2) Dual specificity protein phosphatase 15 (EC... 31 1.1
3CBPE_HUMAN (P16870) Carboxypeptidase E precursor (EC 3.4.17.10) ... 30 2.4
4PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM ... 28 5.3
5FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1 28 6.9
6Y220_SILPO (Q5LX20) UPF0247 protein SPO0220 28 6.9
7MUC1_YEAST (P08640) Mucin-like protein 1 precursor 28 9.0

>PHF15_HUMAN (Q9NQC1) PHD finger protein 15|
          Length = 576

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = +1

Query: 64  GRPARHCRGQRRL--RQSPLVTPPPSPSDGP 150
           G PAR  RG+ RL  ++ P   PPP P DGP
Sbjct: 374 GDPARKARGRTRLPAKKKP---PPPPPQDGP 401



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>DUS15_HUMAN (Q9H1R2) Dual specificity protein phosphatase 15 (EC 3.1.3.48) (EC|
           3.1.3.16)
          Length = 295

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 19  LAACVWRLQA--IREARGRPARHCRGQRRLRQSPLVTPPPSPSDG 147
           LAA V  L A  +REA GR A+ CR   R     L+ PPP  + G
Sbjct: 166 LAARVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPPHVAAG 210



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>CBPE_HUMAN (P16870) Carboxypeptidase E precursor (EC 3.4.17.10) (CPE)|
           (Carboxypeptidase H) (CPH) (Enkephalin convertase)
           (Prohormone-processing carboxypeptidase)
          Length = 476

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 16  SLAACVWRLQAIREARGRPARHCRGQRRLRQ 108
           +LAAC W L A  +  G PA   R +RRL+Q
Sbjct: 15  ALAACGWLLGAEAQEPGAPAAGMRRRRRLQQ 45



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>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore|
           membrane protein of 121 kDa) (P145)
          Length = 1229

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 10/37 (27%)
 Frame = -2

Query: 115 VATVEDDAGRGSGAPA----------GLELHVLPAAA 35
           +A+V D  GRG G PA          GL L+++PAAA
Sbjct: 17  IASVRDGRGRGCGGPAGAALLGLSLVGLLLYLVPAAA 53



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>FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1|
          Length = 959

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 57  SSRPAGAPLPRPASSSTVATRHPSSFS 137
           +++PA  P+P PA++   AT+ PSS S
Sbjct: 207 AAQPAPVPVPAPAATPKAATQAPSSRS 233



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>Y220_SILPO (Q5LX20) UPF0247 protein SPO0220|
          Length = 156

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = -2

Query: 118 RVATVEDDAGRGSGAPAGLELHVLPAAATHTQLERKTK 5
           RV  VED    G GA A L    LPA A    L+ + K
Sbjct: 40  RVVEVEDKKNAGMGAEAALLRKALPAGAVLCTLDERGK 77



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>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 75  APLPRPASSSTVATRHPSSFSFRWT 149
           AP+P P+SSS + +  PSS  F  T
Sbjct: 864 APVPTPSSSSNITSSAPSSIPFSST 888


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,855,775
Number of Sequences: 219361
Number of extensions: 379432
Number of successful extensions: 2110
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2103
length of database: 80,573,946
effective HSP length: 27
effective length of database: 74,651,199
effective search space used: 1791628776
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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