ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl26g11 |
|---|---|
| Clone Library Name | barley_pub |
>EXOC4_ARATH (Q93YU5) Probable exocyst complex component 4 (Exocyst complex| component Sec8) Length = 1053 Score = 147 bits (370), Expect = 8e-36 Identities = 68/87 (78%), Positives = 79/87 (90%) Frame = +2 Query: 98 GIFDGLPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKERSDLI 277 GIF+GLP+P DK+YL+E L+RIDE WAAARFDSLPHVVHILTSKDR+ +I LKE+SD++ Sbjct: 2 GIFNGLPVPSDKTYLREELARIDESWAAARFDSLPHVVHILTSKDREADIHILKEQSDVV 61 Query: 278 EDVVDEVVHAYHHGFNKAIQNYSHILR 358 E+VVDEVVHAYH GFNKAIQNYS ILR Sbjct: 62 EEVVDEVVHAYHGGFNKAIQNYSQILR 88
>NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) Length = 1323 Score = 33.5 bits (75), Expect = 0.13 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = +1 Query: 19 YSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVAD--RRGMGSG 183 YS S + AP P P PA+ RPP +P RA AD RR G+G Sbjct: 891 YSCCSAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTG 947
>NMDE4_MOUSE (Q03391) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) Length = 1323 Score = 33.5 bits (75), Expect = 0.13 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = +1 Query: 19 YSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVAD--RRGMGSG 183 YS S + AP P P PA+ RPP +P RA AD RR G+G Sbjct: 891 YSCCSAEAAPPPAKPPPPPQPLPSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTG 947
>MSG5_YEAST (P38590) Tyrosine-protein phosphatase MSG5 (EC 3.1.3.48)| Length = 489 Score = 32.7 bits (73), Expect = 0.22 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 12/90 (13%) Frame = +2 Query: 44 RLSPGPASPSVTMNRHRRGIFDGLP-------IPPD---KSYLKEGLSRIDEGWAAARFD 193 ++SP P PS++M R I+ LP + P KS +S++ + F Sbjct: 83 KVSPRPTPPSLSMRRSEASIYT-LPTSLKNRTVSPSVYTKSSTVSSISKLSSSSPLSSFS 141 Query: 194 SLPHV--VHILTSKDRDGEIQFLKERSDLI 277 PH+ VH L+ K +D +++ ++ RS I Sbjct: 142 EKPHLNRVHSLSVKTKDLKLKGIRGRSQTI 171
>DBP5_ASPFU (Q4WIN6) ATP-dependent RNA helicase dbp5 (EC 3.6.1.-)| Length = 511 Score = 32.7 bits (73), Expect = 0.22 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -1 Query: 268 APLLEELDLAIAVLGGEDVHDVRQRVEPRRCPSLVDPRQPFLQVR 134 AP+ ++ D A A LGG D+H+ VE + DP P V+ Sbjct: 55 APIGDQTDGAPAQLGGSDLHEPEYNVEVKLSDLQADPNNPLYSVK 99
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 32.0 bits (71), Expect = 0.38 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +1 Query: 25 PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 141 P +P AP P S L VG PP+ +R PP A ++LP Sbjct: 1997 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLP 2035
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2160 Score = 32.0 bits (71), Expect = 0.38 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +1 Query: 25 PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 141 P +P AP P S L VG PP+ +R PP A ++LP Sbjct: 2000 PPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLP 2038
>CD2_RAT (P08921) T-cell surface antigen CD2 precursor (T-cell surface| antigen T11/Leu-5) (LFA-2) (LFA-3 receptor) (OX-34 antigen) Length = 344 Score = 31.2 bits (69), Expect = 0.65 Identities = 17/56 (30%), Positives = 23/56 (41%) Frame = +1 Query: 4 SYPLSYSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVADRRG 171 S P S +PV+ P PG L P P H R ++ P G V ++G Sbjct: 264 SAPASQNPVASQAPPPPGHHLQTPGHRPLPPSHRNREHQPKKRPPPSGTQVHQQKG 319
>UVRB_CLOPE (Q46323) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 659 Score = 30.8 bits (68), Expect = 0.85 Identities = 18/55 (32%), Positives = 33/55 (60%) Frame = +2 Query: 191 DSLPHVVHILTSKDRDGEIQFLKERSDLIEDVVDEVVHAYHHGFNKAIQNYSHIL 355 D L + +LT++D+ E Q LK+R++ +++ E+ G+ + I+NYS IL Sbjct: 264 DELEDRLKVLTAEDKILEAQRLKQRTNYDIEMIREM------GYCQGIENYSRIL 312
>Y4TJ_RHISN (P55664) Putative threonine dehydratase (EC 4.3.1.19) (Threonine| deaminase) Length = 332 Score = 30.8 bits (68), Expect = 0.85 Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 11/89 (12%) Frame = -2 Query: 237 SRSLEVRMCTTCGSESNRAAAHPSSIRDSPSFR*DLSGGIGRPSKMPRRWRF-------- 82 +R + V M +++ A HP +++ S L GGIG M W F Sbjct: 201 ARIIGVTMDRGAAMKASIEAGHPVQVKEYRSLADSLGGGIG----MANAWTFQMCRALLD 256 Query: 81 ---IVTDGEAGPGERREIWRDWAIREGVG 4 +V +GE G R + I EG G Sbjct: 257 DVVLVNEGEIAAGIRHAYEHERQILEGAG 285
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 30.8 bits (68), Expect = 0.85 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = +1 Query: 25 PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 141 P +P AP P S L VG PP +R PP A ++LP Sbjct: 2001 PPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLP 2039
>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2158 Score = 30.8 bits (68), Expect = 0.85 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = +1 Query: 25 PVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILP 141 P +P AP P S L VG PP +R PP A ++LP Sbjct: 1998 PPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLP 2036
>FA84A_BOVIN (Q3ZCA1) Protein FAM84A| Length = 297 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = +2 Query: 110 GLPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKERSDLIED 283 G P + YLK L+ D ARF SL ++ D G ++ L+E +DL++D Sbjct: 240 GTQPPQQQYYLKVHLA--DNKVHTARFHSLEDLIREKRRIDASGRLRVLQELADLVDD 295
>VGLC_BHV1C (P14378) Glycoprotein GIII precursor| Length = 521 Score = 30.0 bits (66), Expect = 1.5 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 10/64 (15%) Frame = +1 Query: 22 SPVSPDLAP---LPGSRLAVGNDEP-------PPAWHLRRPPNSARQILPEGRAVADRRG 171 +P SPD P PG+ VG EP PP + PP P G A R G Sbjct: 57 TPNSPDATPEDSTPGATTPVGTPEPPSVSEHDPPVTNSTPPPAPPEDGRPGGAGNASRDG 116 Query: 172 MGSG 183 SG Sbjct: 117 RPSG 120
>GCSH_PEA (P16048) Glycine cleavage system H protein, mitochondrial precursor| Length = 165 Score = 29.3 bits (64), Expect = 2.5 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 8/104 (7%) Frame = +2 Query: 14 SRIAQSLQISRLSPGPASPSVTMNRHRRGIFDGLPIPPDKSYLKEGLSRIDEGWAAARFD 193 S A +L++S S SP+ +++R + DGL P ++K S G D Sbjct: 8 SSTANALKLSSSSRLHLSPTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATIGITDHAQD 67 Query: 194 SLPHVVHI--------LTSKDRDGEIQFLKERSDLIEDVVDEVV 301 L VV + +T G ++ +K SD+ + EV+ Sbjct: 68 HLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVI 111
>SO2B1_RAT (Q9JHI3) Solute carrier organic anion transporter family member 2B1| (Solute carrier family 21 member 9) (Organic anion transporter moatp1) Length = 682 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -1 Query: 235 AVLGGEDVHDVRQRVEPRRCPSLVDPRQPFLQVRF 131 A +G ED+H+ + +EPR PR F ++F Sbjct: 8 ATMGAEDIHERKVSMEPRDSHQDAQPRGMFQNIKF 42
>REB1_KLULA (Q05950) DNA-binding protein REB1 (QBP)| Length = 595 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = +2 Query: 131 KSYLKEGLSRIDEGWAAARFDSLPHVVHIL----TSKDRDGEIQFLKERSDLIEDVVD 292 ++Y+K G +R W+ + L +V+H + ++ DGE +K+ S IED D Sbjct: 379 RNYVKCGPNRAANKWSVEEEEKLKNVIHQMLDNASTAYEDGEDDEMKDSSTKIEDSGD 436
>SYI_ANTLO (Q27707) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) (Fragment) Length = 628 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = -1 Query: 265 PLLEELDLAIAVLGGEDVHDVRQRVEPRRCPSLVDPRQPFLQVRFVWRNWEAV 107 P+ E+D A+ + G +D+HD+ R + C +V +R+ + WEAV Sbjct: 7 PVEYEIDKALGITGVKDIHDMGIRKYNKECRKIV--------LRYT-KEWEAV 50
>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) (GTP-binding and GTPase activating protein 2) (GGAP2) Length = 1192 Score = 28.5 bits (62), Expect = 4.2 Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 2/85 (2%) Frame = +1 Query: 13 LSYSPVSP--DLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVADRRGMGSGX 186 LS +P SP ++P PG RL++ P P P+S P G + RR Sbjct: 93 LSPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLSPDSK----PGGAPSSSRR------ 142 Query: 187 XXXXXXXXXHPHLQGPRWRDPVPQG 261 P L P W P P+G Sbjct: 143 ----------PLLSSPSWGGPEPEG 157
>CD123_YEAST (Q05791) Cell division cycle protein 123| Length = 360 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +2 Query: 212 HILTSKDRD-GEIQFLKERSDLIEDVVDEVVH 304 HI+ + RD +L E SD +D++DE+VH Sbjct: 206 HIVGATQRDLNYYDYLDELSDTFKDLIDEIVH 237
>YQK4_CAEEL (Q09288) Hypothetical protein C56G2.4 precursor| Length = 538 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = +2 Query: 197 LPHVVHIL---TSKDRDGEIQFLKERSDLIEDVVDEVVHAYH 313 LP+ HIL S++R E + K RS L D+ EV A+H Sbjct: 466 LPYAYHILMKDASQNRTMERRGSKHRSSLYSDMSSEVCAAFH 507
>PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain-containing| protein 2) (Activated in prostate cancer protein) Length = 2839 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = -3 Query: 170 PRRSATALPSGKICLAELGGRRRCHAGGG-----SSLPTARRDPGRGAR 39 PRRS P+G + E GG R C G G + P++ D G A+ Sbjct: 2518 PRRSPGP-PAGGVSCPEKGGNRACPGGSGPKTSAAETPSSASDTGEAAQ 2565
>CENG1_RAT (Q8CGU4) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 28.5 bits (62), Expect = 4.2 Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 2/85 (2%) Frame = +1 Query: 13 LSYSPVSP--DLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVADRRGMGSGX 186 LS +P SP ++P PG RL++ P P P+S P G + RR Sbjct: 93 LSPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLSPDSK----PGGAPSSSRR------ 142 Query: 187 XXXXXXXXXHPHLQGPRWRDPVPQG 261 P L P W P P+G Sbjct: 143 ----------PLLSSPSWGGPEPEG 157
>CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 28.5 bits (62), Expect = 4.2 Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 2/85 (2%) Frame = +1 Query: 13 LSYSPVSP--DLAPLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVADRRGMGSGX 186 LS +P SP ++P PG RL++ P P P+S P G + RR Sbjct: 93 LSPAPASPARPVSPAPGRRLSLWAAPPGPPLSGGLSPDSK----PGGAPSSSRR------ 142 Query: 187 XXXXXXXXXHPHLQGPRWRDPVPQG 261 P L P W P P+G Sbjct: 143 ----------PLLSSPSWGGPEPEG 157
>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (CAN protein) Length = 2090 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 7/63 (11%) Frame = +1 Query: 4 SYPLSYSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRP---PNSARQILPEGR----AVAD 162 S P S P+ + P P R A G+ P P+ + P P +A+ P+ + AVA+ Sbjct: 631 SAPPSSVPLKSSVLPSPSGRSAQGSSSPVPSMVQKSPRITPPAAKPGSPQAKSLQPAVAE 690 Query: 163 RRG 171 ++G Sbjct: 691 KQG 693
>DNAK1_SYNPX (Q7U6R7) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat| shock 70 kDa protein 1) (HSP70-1) Length = 662 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%) Frame = -1 Query: 169 LVDPRQPFLQV-RFVWRNWEAVEDATPVAVHRYRRRGGTRGEAR 41 ++ PR F + RFV R+WE +ED++ +AV Y R RG+ R Sbjct: 59 VLSPRNTFSNLKRFVGRDWEELEDSS-LAV-PYTVRANDRGQVR 100
>SYA_BDEBA (P61698) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 907 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/54 (27%), Positives = 27/54 (50%) Frame = +2 Query: 137 YLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKERSDLIEDVVDEV 298 Y+ ++ +D+ AAA F PH + L + GE L R + ++D V ++ Sbjct: 723 YMMSAVTHLDDALAAAGFQKSPHYIKHL---ETTGETATLANRVESLKDQVKQL 773
>KIF3C_MOUSE (O35066) Kinesin-like protein KIF3C| Length = 796 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Frame = -3 Query: 140 GKICLAELGGRRRCH------AGGGSSLPTARRDPGRGARSGETGLYER 12 GK+ L +L G R + AGG ++ PTA G G+ SG ER Sbjct: 240 GKLNLVDLAGSERQNKAGPNAAGGPATQPTAGGGSGSGSASGSASSGER 288
>SLN1_YEAST (P39928) Osmolarity two-component system protein SLN1 (EC 2.7.13.3)| Length = 1220 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/53 (30%), Positives = 23/53 (43%) Frame = -2 Query: 210 TTCGSESNRAAAHPSSIRDSPSFR*DLSGGIGRPSKMPRRWRFIVTDGEAGPG 52 TT S N A S +P + G +GRP + P+ W + + GPG Sbjct: 813 TTTSSYDN--AIFNSQFNKAPGSDDEEGGNLGRPIENPKTWVISIEVEDTGPG 863
>FA84A_HUMAN (Q96KN4) Protein FAM84A (Protein NSE1)| Length = 292 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/58 (31%), Positives = 28/58 (48%) Frame = +2 Query: 110 GLPIPPDKSYLKEGLSRIDEGWAAARFDSLPHVVHILTSKDRDGEIQFLKERSDLIED 283 G P + YLK L + ARF SL ++ D G ++ L+E +DL++D Sbjct: 235 GTQPPQQQYYLKVHLG--ENKVHTARFHSLEDLIREKRRIDASGRLRVLQELADLVDD 290
>BEGIN_SHEEP (Q6R6L0) Brain-enriched guanylate kinase-associated protein| Length = 653 Score = 28.1 bits (61), Expect = 5.5 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = +1 Query: 7 YPLSYSPV--SPDLAPL-PGSRLAVGNDEPPPAWHLRRPPNSARQILPEGR 150 +P + SP P PL PG + A+ PP W+LR P SAR + GR Sbjct: 422 FPRTVSPFPGEPFRFPLSPGPQPAL---MPPNLWNLRAKPGSARLVAGAGR 469
>B3AT_RAT (P23562) Band 3 anion transport protein (Anion exchange protein 1)| (AE 1) (Solute carrier family 4 member 1) (CD233 antigen) Length = 927 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +1 Query: 73 GNDEPPPAWHLRRPPNSARQILPEGRA 153 G++EP P+ L+ PPNS ++ GRA Sbjct: 221 GSEEPSPSGILKIPPNSETTLVLVGRA 247
>RFNG_CHICK (O12972) Beta-1,3-N-acetylglucosaminyltransferase radical fringe| (EC 2.4.1.222) (O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase) Length = 372 Score = 27.7 bits (60), Expect = 7.2 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = +1 Query: 1 TSYPLSYSPVSPDLAPLP-GSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVADRRGMG 177 T + LS + + L LP G A PPPA R P+ R+ P G V RG G Sbjct: 11 TCFLLSVTAAAVLLLLLPRGQPPAAPRRRPPPAGPSR--PSPKREARPAGSDVPGDRGGG 68 Query: 178 SG 183 SG Sbjct: 69 SG 70
>YNL4_SCHPO (Q9P6S3) Hypothetical protein C27.04 in chromosome II| Length = 1052 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +2 Query: 218 LTSKDRDGEIQFLKERSDLIEDVVDEVVHAYHHGFNKAIQN 340 L + RD + LKE D+IE+ + + GF++A +N Sbjct: 354 LLASVRDENTKKLKELQDIIEEQSKHMARLHREGFSEAAEN 394
>PPK_STRGR (Q9EUS8) Polyphosphate kinase (EC 2.7.4.1) (Polyphosphoric acid| kinase) (ATP-polyphosphate phosphotransferase) (Fragment) Length = 703 Score = 27.7 bits (60), Expect = 7.2 Identities = 19/46 (41%), Positives = 23/46 (50%) Frame = -1 Query: 202 RQRVEPRRCPSLVDPRQPFLQVRFVWRNWEAVEDATPVAVHRYRRR 65 RQRV P P VDP PF + + N AV PV+ HR+ R Sbjct: 148 RQRVFPVLTPLAVDPAHPFPYISGLSLNL-AVVVRNPVSGHRHFAR 192
>SH22A_HUMAN (Q9NP31) SH2 domain protein 2A (T cell-specific adapter protein)| (TSAd) (VEGF receptor-associated protein) (SH2 domain-containing adapter protein) Length = 389 Score = 27.7 bits (60), Expect = 7.2 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +1 Query: 82 EPPPAWHLRRPPNSARQILPE 144 +PPPAW P N +RQ+L + Sbjct: 357 QPPPAWRHTLPHNLSRQVLQD 377
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +1 Query: 4 SYPLSYSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPN 120 S P +YSP P PLP S + PPP + PP+ Sbjct: 325 SPPPTYSPPPPTYLPLPSSPI---YSPPPPVYSPPPPPS 360
>CF136_RAT (Q6MG12) Protein C6orf136 homolog| Length = 172 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +1 Query: 16 SYSPVSPDLAPLPGSRLAVGNDEPPPAWHL 105 S+SP +P L G+ +A+G EP P+ HL Sbjct: 139 SHSPSTPVKKLLVGALVALGLSEPEPSLHL 168
>GCSH_STRAW (Q82JI1) Glycine cleavage system H protein| Length = 125 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +2 Query: 197 LPHVVHILTSKDRDGEIQFLKERSDLIEDVVDEVVHA 307 LP V +T+ + GE++ K SDL V EVV A Sbjct: 44 LPEVGDTVTAGETCGELESTKSVSDLYSPVTGEVVEA 80
>CBID_METMA (Q8PWA9) Putative cobalt-precorrin-6A synthase [deacetylating] (EC| 2.1.1.-) Length = 339 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +2 Query: 5 PTPSRIAQSLQISRLSPGPASPSVTMNRHRRGIFDGL 115 PTP + L++S SPG A +N H I GL Sbjct: 74 PTPVGLRAHLEVSESSPGRAVVKKILNDHESDITRGL 110
>SIF2_DROME (P91620) Protein still life, isoforms C/SIF type 2| Length = 2061 Score = 27.3 bits (59), Expect = 9.4 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 8/90 (8%) Frame = +2 Query: 38 ISRLSPGPASPSVTMNRHRRGIFDGLPIPPDKSY----LKEGLSRIDEGWAAA----RFD 193 +SR + G + S+ MN PD +Y L++ +S ++E A+A + Sbjct: 1079 LSRSNSGSSRRSMQMNSRDEPEKTFKVAMPDNAYSTVYLRDAMS-VEEFLASACARRNLN 1137 Query: 194 SLPHVVHILTSKDRDGEIQFLKERSDLIED 283 + H V + +D + F+ R+DLIE+ Sbjct: 1138 PMEHFVRVKKRRDMEDHNYFVPHRNDLIEN 1167
>SIF1_DROME (P91621) Protein still life, isoform SIF type 1| Length = 2072 Score = 27.3 bits (59), Expect = 9.4 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 8/90 (8%) Frame = +2 Query: 38 ISRLSPGPASPSVTMNRHRRGIFDGLPIPPDKSY----LKEGLSRIDEGWAAA----RFD 193 +SR + G + S+ MN PD +Y L++ +S ++E A+A + Sbjct: 1099 LSRSNSGSSRRSMQMNSRDEPEKTFKVAMPDNAYSTVYLRDAMS-VEEFLASACARRNLN 1157 Query: 194 SLPHVVHILTSKDRDGEIQFLKERSDLIED 283 + H V + +D + F+ R+DLIE+ Sbjct: 1158 PMEHFVRVKKRRDMEDHNYFVPHRNDLIEN 1187
>CF015_MACMU (Q9BGL9) Protein C6orf15 homolog precursor (rmSTG)| Length = 314 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +1 Query: 4 SYPLSYSPVSPDLAPLPGSRLAVGNDEPPPAWHLRRPPNSAR 129 SY S + ++P PLPG D P A HL + S R Sbjct: 136 SYLSSAAALAPGSGPLPGESSPDATDLSPEASHLHQDSESRR 177
>RS142_MAIZE (P19951) 40S ribosomal protein S14 (Clone MCH2)| Length = 150 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -1 Query: 109 VEDATPVAVHRYRRRGGTRG 50 +ED TPV RR+GG RG Sbjct: 128 IEDVTPVPTDSTRRKGGRRG 147
>BCB1_ARATH (Q07488) Blue copper protein precursor (Blue copper-binding| protein) (AtBCB) (Stellacyanin) (Phytocyanin 1) Length = 196 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/42 (33%), Positives = 17/42 (40%) Frame = +1 Query: 46 PLPGSRLAVGNDEPPPAWHLRRPPNSARQILPEGRAVADRRG 171 P PGS + G PP A P S+ P G A + G Sbjct: 140 PAPGSTPSTGGTTPPTAGGTTTPSGSSGTTTPAGNAASSLGG 181
>SEC8_NEUCR (Q9HE88) Probable exocyst complex component sec8| Length = 1111 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/44 (25%), Positives = 23/44 (52%) Frame = +2 Query: 221 TSKDRDGEIQFLKERSDLIEDVVDEVVHAYHHGFNKAIQNYSHI 352 +S R E + ++ +++ + +VH +H GFN +I + I Sbjct: 115 SSVGRAHEYRNFQQTHQFLQESLKNIVHDHHQGFNSSIGTFHKI 158
>QUEA_GLOVI (Q7NFD9) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 352 Score = 27.3 bits (59), Expect = 9.4 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -1 Query: 124 RNWEAVEDATPVAVHRYRRRGG 59 R W + +AT +A+ R R RGG Sbjct: 232 REWYEIPEATAIAIERTRSRGG 253
>Y1732_AQUAE (O67622) UPF0144 protein aq_1732| Length = 558 Score = 27.3 bits (59), Expect = 9.4 Identities = 18/64 (28%), Positives = 28/64 (43%) Frame = -1 Query: 220 EDVHDVRQRVEPRRCPSLVDPRQPFLQVRFVWRNWEAVEDATPVAVHRYRRRGGTRGEAR 41 E+V +++ VE R+ + R + R WEA+E +HR R E + Sbjct: 92 EEVERIKEEVERRKKELKEREENVLAKERHLDRRWEALEKREEELLHRER-------ELK 144 Query: 40 DLER 29 D ER Sbjct: 145 DFER 148
>RS141_MAIZE (P19950) 40S ribosomal protein S14 (Clone MCH1)| Length = 149 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -1 Query: 109 VEDATPVAVHRYRRRGGTRG 50 +ED TPV RR+GG RG Sbjct: 127 IEDVTPVPTDSTRRKGGRRG 146 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.138 0.460 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,586,097 Number of Sequences: 219361 Number of extensions: 1160452 Number of successful extensions: 3303 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3186 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3300 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
