Clone Name | bastl26g10 |
---|---|
Clone Library Name | barley_pub |
>NIFK_ANASP (P00468) Nitrogenase molybdenum-iron protein beta chain (EC| 1.18.6.1) (Nitrogenase component I) (Dinitrogenase) Length = 512 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/42 (28%), Positives = 21/42 (50%) Frame = +1 Query: 22 NFASAPTPEPESRNNSWLRELLIQDKESERQEISIRPKKSCK 147 NF A PE R + W + ++K R+ +++ P K C+ Sbjct: 30 NFEGAHPPEEVERVSEWTKSWDYREKNFAREALTVNPAKGCQ 71
>PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3) Length = 342 Score = 28.9 bits (63), Expect = 3.2 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +3 Query: 246 PSQSWSLFKLRQLLGDPPVLGTWLNYTDFC 335 P +L ++++ LG+P L +WL TD C Sbjct: 34 PQDKQALLQIKKDLGNPTTLSSWLPTTDCC 63
>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 342 Score = 28.9 bits (63), Expect = 3.2 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +3 Query: 246 PSQSWSLFKLRQLLGDPPVLGTWLNYTDFC 335 P +L ++++ LG+P L +WL TD C Sbjct: 34 PQDKQALLQIKKDLGNPTTLSSWLPTTDCC 63
>PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 342 Score = 28.9 bits (63), Expect = 3.2 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +3 Query: 246 PSQSWSLFKLRQLLGDPPVLGTWLNYTDFC 335 P +L ++++ LG+P L +WL TD C Sbjct: 34 PQDKQALLQIKKDLGNPTTLSSWLPTTDCC 63
>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor| (Polygalacturonase-inhibiting protein) Length = 330 Score = 28.1 bits (61), Expect = 5.4 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +3 Query: 246 PSQSWSLFKLRQLLGDPPVLGTWLNYTDFC 335 P L ++++ GDP VL +W + TD C Sbjct: 29 PDDKKVLLQIKKAFGDPYVLASWKSDTDCC 58
>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +3 Query: 246 PSQSWSLFKLRQLLGDPPVLGTW-LNYTDFC 335 PS +L +++Q LG+P L TW L D C Sbjct: 29 PSDKQALMRVKQSLGNPATLSTWSLASADCC 59
>ZHX2_HUMAN (Q9Y6X8) Zinc fingers and homeoboxes protein 2 (Zinc finger and| homeodomain protein 2) (Alpha-fetoprotein regulator 1) (AFP regulator 1) (Regulator of AFP) Length = 837 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +1 Query: 40 TPEPESRNNSWLRELLIQDKESERQEISIRPKKSCKK 150 TP+P+ +SW EL KE+E E+ + KK Sbjct: 37 TPQPDVAKDSWAAELENSSKENEVIEVKSMGESQSKK 73
>MS3L1_MOUSE (Q9WVG9) Male-specific lethal 3-like 1 (MSL3-like 1) (Male-specific| lethal-3 homolog 1) Length = 525 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +2 Query: 107 KDKRLASGPRNLVKKNGWNNPWPRPWSA 190 KD++ P L+ NGWN W R W+A Sbjct: 42 KDEKGRKIPEYLIHFNGWNRSWDR-WAA 68
>MS3L1_HUMAN (Q8N5Y2) Male-specific lethal 3-like 1 (MSL3-like 1) (Male-specific| lethal-3 homolog 1) Length = 521 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +2 Query: 107 KDKRLASGPRNLVKKNGWNNPWPRPWSA 190 KD++ P L+ NGWN W R W+A Sbjct: 42 KDEKGRKIPEYLIHFNGWNRSWDR-WAA 68
>CYB_LEITA (P14548) Cytochrome b| Length = 371 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +3 Query: 258 WSLFKLRQLLGDPPVLGTWLNYTDFCYGGDY 350 W L +L PV+GTWL Y + +G +Y Sbjct: 142 WGLTVFSNILATVPVIGTWLCY--WIWGSEY 170
>RET_HUMAN (P07949) Proto-oncogene tyrosine-protein kinase receptor ret| precursor (EC 2.7.10.1) (C-ret) Length = 1114 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -3 Query: 316 SQVPSTGGSPRSCRSLKRDQDCEGCSGV 233 S V G P SC KR +CE C G+ Sbjct: 507 SYVAEEAGCPLSCAVSKRRLECEECGGL 534 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,342,965 Number of Sequences: 219361 Number of extensions: 686598 Number of successful extensions: 2416 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2369 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2416 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)