ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl26g08 |
|---|---|
| Clone Library Name | barley_pub |
>AT2B1_RAT (P11505) Plasma membrane calcium-transporting ATPase 1 (EC 3.6.3.8)| (PMCA1) (Plasma membrane calcium pump isoform 1) (Plasma membrane calcium ATPase isoform 1) Length = 1258 Score = 31.6 bits (70), Expect = 0.57 Identities = 18/65 (27%), Positives = 27/65 (41%) Frame = +2 Query: 17 KPEPENDASPEVINDISSESLVKLAPSSADIPLTESNEKAQNAEDQVVASGSVENVGVEK 196 +P +D VI ++SE L + + D P E + N D V + VG+E Sbjct: 625 RPRDRDDIVKTVIEPMASEGLRTICLAFRDFPAGEPEPEWDNENDVVTGLTCIAVVGIED 684 Query: 197 PTEVE 211 P E Sbjct: 685 PVRPE 689
>AT2B1_HUMAN (P20020) Plasma membrane calcium-transporting ATPase 1 (EC 3.6.3.8)| (PMCA1) (Plasma membrane calcium pump isoform 1) (Plasma membrane calcium ATPase isoform 1) Length = 1258 Score = 31.2 bits (69), Expect = 0.75 Identities = 18/65 (27%), Positives = 27/65 (41%) Frame = +2 Query: 17 KPEPENDASPEVINDISSESLVKLAPSSADIPLTESNEKAQNAEDQVVASGSVENVGVEK 196 +P +D VI ++SE L + + D P E + N D V + VG+E Sbjct: 625 RPRDRDDIVKTVIEPMASEGLRTICLAFRDFPAGEPEPEWDNENDIVTGLTCIAVVGIED 684 Query: 197 PTEVE 211 P E Sbjct: 685 PVRPE 689
>AT2B1_PIG (P23220) Plasma membrane calcium-transporting ATPase 1 (EC 3.6.3.8)| (PMCA1) (Plasma membrane calcium pump isoform 1) Length = 1220 Score = 31.2 bits (69), Expect = 0.75 Identities = 18/65 (27%), Positives = 27/65 (41%) Frame = +2 Query: 17 KPEPENDASPEVINDISSESLVKLAPSSADIPLTESNEKAQNAEDQVVASGSVENVGVEK 196 +P +D VI ++SE L + + D P E + N D V + VG+E Sbjct: 625 RPRDRDDIVKTVIEPMASEGLRTICLAFRDFPAGEPEPEWDNENDIVTGLTCIAVVGIED 684 Query: 197 PTEVE 211 P E Sbjct: 685 PVRPE 689
>DAPB_WOLSU (Q7MA63) Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR)| Length = 256 Score = 30.8 bits (68), Expect = 0.98 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = +2 Query: 83 KLAPSSADIPLTESNEKAQNAE-DQVVASGSVENVGVEKPTEVESVVAGGDDV 238 K +PS + L ES KA+ E D+V SG N+G K E+ + G D+ Sbjct: 150 KDSPSGTALTLAESCAKARGVELDEVRVSGRNGNIGERKSEEIAVMSLRGGDI 202
>AT2B1_RABIT (Q00804) Plasma membrane calcium-transporting ATPase 1 (EC 3.6.3.8)| (PMCA1) (Plasma membrane calcium pump isoform 1) Length = 1249 Score = 30.4 bits (67), Expect = 1.3 Identities = 18/65 (27%), Positives = 27/65 (41%) Frame = +2 Query: 17 KPEPENDASPEVINDISSESLVKLAPSSADIPLTESNEKAQNAEDQVVASGSVENVGVEK 196 +P +D VI ++SE L + + D P E + N D V + VG+E Sbjct: 625 RPRDRDDIVKTVIEPMASEGLRTICLAFRDFPAGEPEPEWDNENDIVTGLTCIAVVGIED 684 Query: 197 PTEVE 211 P E Sbjct: 685 PGRPE 689
>LIFR_CANFA (Q5XNR9) Leukemia inhibitory factor receptor precursor (LIF| receptor) (LIF-R) (CD118 antigen) Length = 1097 Score = 30.4 bits (67), Expect = 1.3 Identities = 19/75 (25%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Frame = +2 Query: 17 KPEPENDASPEVINDISSESLVKLAPSSADIPLTESNEKAQ-NAEDQVVASGSVENVGVE 193 KP P N+A+ ++++ S SL + S ++IP + + Q + D +++ + +VG Sbjct: 557 KPLPINEANGKILSYNVSCSLDEETQSLSEIPDPQHKAELQLDKNDYIISVVAKNSVGSS 616 Query: 194 KPTEVESVVAGGDDV 238 P+++ S+ DD+ Sbjct: 617 PPSKIASMEIPNDDL 631
>FAT_DROME (P33450) Cadherin-related tumor suppressor precursor (Protein fat)| Length = 5147 Score = 29.3 bits (64), Expect = 2.8 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2 Query: 29 ENDASPEVINDISSESLVKLAPSSADIPLTESNEKAQNAEDQVVASGSVEN 181 END +PE S S+++ +P+ ++ +++ Q QVV S S N Sbjct: 1377 ENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSISAGN 1427
>LR37A_HUMAN (O60309) Leucine-rich repeat-containing protein 37A| Length = 1634 Score = 29.3 bits (64), Expect = 2.8 Identities = 22/71 (30%), Positives = 32/71 (45%) Frame = +2 Query: 23 EPENDASPEVINDISSESLVKLAPSSADIPLTESNEKAQNAEDQVVASGSVENVGVEKPT 202 EPE +PE + DI S SL + AP+ L E Q + S+E++ + P Sbjct: 221 EPETQ-NPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTL--PN 277 Query: 203 EVESVVAGGDD 235 SV G+D Sbjct: 278 HEVSVQPPGED 288
>IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS)| Length = 1321 Score = 28.5 bits (62), Expect = 4.9 Identities = 19/57 (33%), Positives = 25/57 (43%) Frame = +2 Query: 65 SSESLVKLAPSSADIPLTESNEKAQNAEDQVVASGSVENVGVEKPTEVESVVAGGDD 235 SSE+ + P N K N S SVENV + K +E S + GGD+ Sbjct: 1137 SSETFSSTTTVTPVSPSFAHNSKRHN-------SASVENVSLRKSSEGSSTLGGGDE 1186
>NBR1_MOUSE (P97432) Next to BRCA1 gene 1 protein (Neighbor of BRCA1 gene 1| protein) (Membrane component, chromosome 17, surface marker 2) Length = 988 Score = 28.5 bits (62), Expect = 4.9 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 4/77 (5%) Frame = +2 Query: 20 PEPENDASPEVINDISSES----LVKLAPSSADIPLTESNEKAQNAEDQVVASGSVENVG 187 PE E+ + I+DI + S V L P A +P S ++A S V++ G Sbjct: 802 PERESQPQEQSISDILTTSQPLDTVPLVPEVAGLPAALS----RSAPCGQCESSGVDSPG 857 Query: 188 VEKPTEVESVVAGGDDV 238 V+ P + V DD+ Sbjct: 858 VDSPATMHEVPPAPDDI 874
>ZBT38_HUMAN (Q8NAP3) Zinc finger and BTB domain-containing protein 38| Length = 1195 Score = 28.5 bits (62), Expect = 4.9 Identities = 18/72 (25%), Positives = 37/72 (51%) Frame = +2 Query: 5 DEAAKPEPENDASPEVINDISSESLVKLAPSSADIPLTESNEKAQNAEDQVVASGSVENV 184 +EA K + +N+ ++ S+E+ V + D+P+ + ++NA + SGS +V Sbjct: 657 EEALKMDLDNNFYSTEVSVSSTENAVSSDLRAGDVPVLSLSNSSENAASVISYSGSAPSV 716 Query: 185 GVEKPTEVESVV 220 V ++ SV+ Sbjct: 717 IVHS-SQFSSVI 727
>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2| Length = 984 Score = 28.1 bits (61), Expect = 6.3 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = +2 Query: 14 AKPEPE-NDASPEVINDISSESLVKLAPSSADIPLTESNEKAQNAEDQVVASGSVENVGV 190 A+P PE A+PE + + + V+ A ++ P + EKA + + S E V Sbjct: 161 AQPAPEAQSAAPEKVEAHDAGAPVQQAETTESAPAEPAAEKAPAEKRRYEVSMEPEKDSV 220 Query: 191 EKPTEVESVVAGG 229 + TE + GG Sbjct: 221 QADTEADGDADGG 233
>SPB1_DEBHA (Q6BNQ8) AdoMet-dependent rRNA methyltransferase SPB1 (EC 2.1.1.-)| (2'-O-ribose RNA methyltransferase) (S-adenosyl-L-methionine-dependent methyltransferase) Length = 831 Score = 28.1 bits (61), Expect = 6.3 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = +2 Query: 5 DEAAKPEPENDASPEVINDISSESLVKLAPSSADIPLTESNEKAQN 142 D + KPE S + ND+S +S ++ P++ D L++S+ +N Sbjct: 586 DISNKPEQMEVDSSDSENDVSDDSDFEIVPNAPDEELSDSDSDNEN 631
>CASK_HORSE (P82187) Kappa-casein precursor (Kappa-CN)| Length = 185 Score = 27.7 bits (60), Expect = 8.3 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +2 Query: 20 PEPENDASPEVINDISSESLVKLAPSSADIPLT 118 P PE + VI D SSE ++ P + +P+T Sbjct: 146 PTPEPTVNNAVIPDASSEFIIASTPETTTVPVT 178
>DNB2_ADE05 (P03265) Early E2A DNA-binding protein| Length = 529 Score = 27.7 bits (60), Expect = 8.3 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 8/81 (9%) Frame = +2 Query: 2 KDEAAKPEPENDASPEVINDISSE----SLVKLAPSSADIPLTESNEKAQNA----EDQV 157 K + P+PE SPEVI D E +L + S+ + + + ED Sbjct: 87 KKKRPSPKPERPPSPEVIVDSEEEREDVALQMVGFSNPPVLIKHGKGGKRTVRRLNEDDP 146 Query: 158 VASGSVENVGVEKPTEVESVV 220 VA G E+P+E ES + Sbjct: 147 VARGMRTQEEEEEPSEAESEI 167
>NCOR1_XENTR (Q4KKX4) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (xN-CoR)| Length = 2494 Score = 27.7 bits (60), Expect = 8.3 Identities = 17/65 (26%), Positives = 27/65 (41%) Frame = +2 Query: 44 PEVINDISSESLVKLAPSSADIPLTESNEKAQNAEDQVVASGSVENVGVEKPTEVESVVA 223 P D+S V S+ + E++ + +NAED A S + P+ E+ Sbjct: 684 PREERDVSQCESVASTVSAQEDEENEASNEEENAEDSEGAENSSDTESAPSPSPAEAAKL 743 Query: 224 GGDDV 238 G D V Sbjct: 744 GDDAV 748
>CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) Length = 913 Score = 27.7 bits (60), Expect = 8.3 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = +2 Query: 14 AKPEPENDASPEVINDISSESLVKLAPSSADIPLTESNEKAQNAEDQVVASGSVENVGVE 193 A PE E+ P++ S+ ++ LA +P E+ ++ ED + + VGV+ Sbjct: 653 AGPESEH---PKIKPSSSANAIYSLAARPLPMPKLPPGEQGESEEDTEYMTPTSRPVGVQ 709 Query: 194 KP 199 KP Sbjct: 710 KP 711
>MKL1_HUMAN (Q969V6) MKL/myocardin-like protein 1 (Myocardin-related| transcription factor A) (MRTF-A) (Megakaryoblastic leukemia 1 protein) (Megacaryocytic acute leukemia protein) Length = 931 Score = 27.7 bits (60), Expect = 8.3 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 8/65 (12%) Frame = +2 Query: 2 KDEAAKPEPENDASPEVINDISSESLVK-LAP-------SSADIPLTESNEKAQNAEDQV 157 K EA +PEPE +P+++ SL+K +AP + + LT +N +NA+ Sbjct: 624 KQEALQPEPEPVPAPQLLLGPQGPSLIKGVAPPTLITDSTGTHLVLTVTN---KNADSPG 680 Query: 158 VASGS 172 ++SGS Sbjct: 681 LSSGS 685
>TNAP2_MOUSE (Q61333) Tumor necrosis factor, alpha-induced protein 2 (Primary| response gene B94 protein) Length = 650 Score = 27.7 bits (60), Expect = 8.3 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = -1 Query: 94 RSKLHQTLRANVIDNLRTCIVFW 26 +SKL + R N++ N+ C+ FW Sbjct: 407 KSKLLRNYRVNIMANINNCLFFW 429
>CASK_EQUGR (Q28400) Kappa-casein (Fragment)| Length = 135 Score = 27.7 bits (60), Expect = 8.3 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +2 Query: 20 PEPENDASPEVINDISSESLVKLAPSSADIPLT 118 P PE + VI D SSE ++ P + +P+T Sbjct: 99 PTPEPTVNNAVIPDASSEFIIASTPETTTVPVT 131 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,407,034 Number of Sequences: 219361 Number of extensions: 350628 Number of successful extensions: 1592 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 1544 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1592 length of database: 80,573,946 effective HSP length: 54 effective length of database: 68,728,452 effective search space used: 1649482848 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
